BLASTX nr result

ID: Glycyrrhiza24_contig00019009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019009
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617651.1| PHD finger protein [Medicago truncatula] gi|...   103   1e-20
ref|XP_003519600.1| PREDICTED: uncharacterized protein LOC100807...    96   3e-18
ref|XP_003545110.1| PREDICTED: uncharacterized protein LOC100783...    87   1e-15
ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_004161893.1| PREDICTED: uncharacterized LOC101224472 [Cuc...    72   6e-11

>ref|XP_003617651.1| PHD finger protein [Medicago truncatula]
           gi|355518986|gb|AET00610.1| PHD finger protein [Medicago
           truncatula]
          Length = 874

 Score =  103 bits (257), Expect = 1e-20
 Identities = 63/98 (64%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
 Frame = +2

Query: 134 MEEVP--EPTPDPQXXXXXXXXXXXXXXXCSKKAKVEVDSEVVASEGELKRVAEIVLVLS 307
           M++VP  EPT DP                 SKKAKVE +     SE ELKRVAEIVLVLS
Sbjct: 1   MDDVPVSEPTLDPPPEIENGGGEQQEERL-SKKAKVEENEN---SEAELKRVAEIVLVLS 56

Query: 308 TMATMRGGRKPTEVEVELMREARTKLANLCQGLAPKDI 421
           TMATMR G+KPT+VEVELMREARTKLA LCQG+APKDI
Sbjct: 57  TMATMRSGKKPTDVEVELMREARTKLAVLCQGIAPKDI 94


>ref|XP_003519600.1| PREDICTED: uncharacterized protein LOC100807139 [Glycine max]
          Length = 830

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/95 (54%), Positives = 63/95 (66%)
 Frame = +2

Query: 137 EEVPEPTPDPQXXXXXXXXXXXXXXXCSKKAKVEVDSEVVASEGELKRVAEIVLVLSTMA 316
           + VP+P P+ Q               C+KK K +  +E       LKRVAEIVLVLSTMA
Sbjct: 3   DAVPDPQPEEQPQRPPPLLNGYSDERCAKKPKFDEGAE-------LKRVAEIVLVLSTMA 55

Query: 317 TMRGGRKPTEVEVELMREARTKLANLCQGLAPKDI 421
           T+R GRKP++ EVELMREAR KLA+LC+GLAPKDI
Sbjct: 56  TVRAGRKPSDAEVELMREARAKLASLCEGLAPKDI 90


>ref|XP_003545110.1| PREDICTED: uncharacterized protein LOC100783208 [Glycine max]
          Length = 830

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/69 (66%), Positives = 54/69 (78%)
 Frame = +2

Query: 215 CSKKAKVEVDSEVVASEGELKRVAEIVLVLSTMATMRGGRKPTEVEVELMREARTKLANL 394
           C+KK K +  +E        KRVAEIVLVLSTMAT+R GRKP++ EVELMREAR KLA+L
Sbjct: 30  CAKKPKFDQGAE-------FKRVAEIVLVLSTMATVRAGRKPSDAEVELMREARAKLASL 82

Query: 395 CQGLAPKDI 421
           C+GLAPKDI
Sbjct: 83  CEGLAPKDI 91


>ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|222846100|gb|EEE83647.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 7/75 (9%)
 Frame = +2

Query: 218 SKKAKVE-VDSEVVASE------GELKRVAEIVLVLSTMATMRGGRKPTEVEVELMREAR 376
           S+K ++E V+SE +A++      GE+++VAEIVLVLS MA MRGG+ PT+ EV LM EAR
Sbjct: 24  SEKRQMENVESEELAAKRAKNGVGEIRKVAEIVLVLSAMAGMRGGKNPTDAEVRLMEEAR 83

Query: 377 TKLANLCQGLAPKDI 421
            KL  +CQ L+PKD+
Sbjct: 84  EKLVEICQDLSPKDL 98


>ref|XP_004161893.1| PREDICTED: uncharacterized LOC101224472 [Cucumis sativus]
          Length = 728

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/50 (66%), Positives = 41/50 (82%)
 Frame = +2

Query: 272 LKRVAEIVLVLSTMATMRGGRKPTEVEVELMREARTKLANLCQGLAPKDI 421
           L+RVAEIVLV+STM  +RGG+KP++ EV LM EAR KL  +C+GL PKDI
Sbjct: 48  LRRVAEIVLVMSTMTALRGGKKPSDAEVGLMAEARAKLVRICEGLPPKDI 97


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