BLASTX nr result

ID: Glycyrrhiza24_contig00018972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018972
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39960.1| unknown [Lotus japonicus]                              219   5e-55
ref|XP_003529294.1| PREDICTED: F-box protein At1g61340-like [Gly...   217   2e-54
ref|XP_003530987.1| PREDICTED: F-box protein At1g61340-like [Gly...   205   8e-51
ref|XP_003608235.1| F-box protein SKIP27 [Medicago truncatula] g...   195   1e-47
gb|AFK44316.1| unknown [Medicago truncatula]                          193   4e-47

>gb|AFK39960.1| unknown [Lotus japonicus]
          Length = 154

 Score =  219 bits (558), Expect = 5e-55
 Identities = 117/160 (73%), Positives = 130/160 (81%), Gaps = 3/160 (1%)
 Frame = +3

Query: 126 MALGFESYSYGRAL--GRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRLE 299
           MALGFE YS+ R L  GRKRVVV+NN      + +  VM PLKRVCSGR +FNSERSRLE
Sbjct: 1   MALGFEGYSFARTLSMGRKRVVVTNN------VENDSVMTPLKRVCSGRINFNSERSRLE 54

Query: 300 ALPQDVLVRVLCGVDHEDLEQLLHVSKTIREAAEIAKRMHFEYSTPKKKTFAFLAPVDLG 479
           ALP DVL+RVLCGVDHEDLEQLLHVSKTIREA EIA+  HFEYSTPKKKTF F +P D+ 
Sbjct: 55  ALPLDVLIRVLCGVDHEDLEQLLHVSKTIREATEIARDFHFEYSTPKKKTFGFRSPFDIE 114

Query: 480 DASGFEEIETPKAPLRKS-KARLNGGNLAGISVALFASTE 596
           DA+ FEEIE PKAPLRKS K++L+G NL GISVALF STE
Sbjct: 115 DANEFEEIEAPKAPLRKSVKSKLSGKNLGGISVALFGSTE 154


>ref|XP_003529294.1| PREDICTED: F-box protein At1g61340-like [Glycine max]
          Length = 155

 Score =  217 bits (553), Expect = 2e-54
 Identities = 112/155 (72%), Positives = 128/155 (82%)
 Frame = +3

Query: 126 MALGFESYSYGRALGRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRLEAL 305
           M LGFE YSY   LGRKRVV+ +N  EAS L S+  + PLKR+CSG+F+F+SERSRLEAL
Sbjct: 1   MTLGFEGYSYTTTLGRKRVVLLHN--EASSLNSNSAVNPLKRMCSGKFTFDSERSRLEAL 58

Query: 306 PQDVLVRVLCGVDHEDLEQLLHVSKTIREAAEIAKRMHFEYSTPKKKTFAFLAPVDLGDA 485
           P DVL+RVLCGVDHEDLEQL+ VSKT+REAAEIA+RMHFEYSTPKKKTFA   P D+  A
Sbjct: 59  PLDVLIRVLCGVDHEDLEQLVRVSKTVREAAEIARRMHFEYSTPKKKTFALPKPFDIEGA 118

Query: 486 SGFEEIETPKAPLRKSKARLNGGNLAGISVALFAS 590
            GFEEI+TP APLRK K++L G NLA ISVALFAS
Sbjct: 119 GGFEEIDTPNAPLRKPKSKLIGKNLASISVALFAS 153


>ref|XP_003530987.1| PREDICTED: F-box protein At1g61340-like [Glycine max]
          Length = 155

 Score =  205 bits (522), Expect = 8e-51
 Identities = 106/155 (68%), Positives = 127/155 (81%)
 Frame = +3

Query: 126 MALGFESYSYGRALGRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRLEAL 305
           MALGFE YSY   LGRKRVV+ ++  EAS L S+  +  LKR+CS +F+F+SERSRLEAL
Sbjct: 1   MALGFEGYSYTTTLGRKRVVLLHS--EASSLNSNSPVNSLKRMCSKKFTFDSERSRLEAL 58

Query: 306 PQDVLVRVLCGVDHEDLEQLLHVSKTIREAAEIAKRMHFEYSTPKKKTFAFLAPVDLGDA 485
           P DVL+RVLCGVDHEDL+QL+ VSKT+REAAE+A+RMHFEYSTPKKK FA   P D+  A
Sbjct: 59  PLDVLIRVLCGVDHEDLKQLVRVSKTVREAAEVARRMHFEYSTPKKKNFAIPKPFDIEGA 118

Query: 486 SGFEEIETPKAPLRKSKARLNGGNLAGISVALFAS 590
            GFEEI+TPKAP +K+K++L G NLA ISVALFAS
Sbjct: 119 GGFEEIDTPKAPSKKAKSKLIGKNLASISVALFAS 153


>ref|XP_003608235.1| F-box protein SKIP27 [Medicago truncatula]
           gi|87240734|gb|ABD32592.1| At1g61340 [Medicago
           truncatula] gi|355509290|gb|AES90432.1| F-box protein
           SKIP27 [Medicago truncatula]
          Length = 161

 Score =  195 bits (495), Expect = 1e-47
 Identities = 105/160 (65%), Positives = 126/160 (78%), Gaps = 3/160 (1%)
 Frame = +3

Query: 117 IGDMALGFESYSYGRALGRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRL 296
           + DM LGF++YSYGRALGRKRVVVSNN+       S+PV  PLKR+CSGRF   SE+SRL
Sbjct: 7   VSDMTLGFDTYSYGRALGRKRVVVSNND---EAFESNPVTVPLKRMCSGRFDTISEKSRL 63

Query: 297 EALPQDVLVRVLCGVDHEDLEQLLHVSKTIREAAEIAKRMHFEYSTPKKKTFAFLAPVDL 476
           EALPQD+LVRVLCGVDH+DLEQL +VS TI+EA EIAK+MHFE+STPKK + A  +P D+
Sbjct: 64  EALPQDLLVRVLCGVDHDDLEQLFNVSTTIKEAGEIAKQMHFEFSTPKKSSVAVRSPFDI 123

Query: 477 GDASGF-EEIETPKAPL--RKSKARLNGGNLAGISVALFA 587
              +GF +EIE P APL  +KSK RL+   LAGISV+LFA
Sbjct: 124 --ENGFDDEIEAPNAPLMSKKSKPRLSANKLAGISVSLFA 161


>gb|AFK44316.1| unknown [Medicago truncatula]
          Length = 161

 Score =  193 bits (490), Expect = 4e-47
 Identities = 104/160 (65%), Positives = 125/160 (78%), Gaps = 3/160 (1%)
 Frame = +3

Query: 117 IGDMALGFESYSYGRALGRKRVVVSNNNAEASPLGSSPVMAPLKRVCSGRFSFNSERSRL 296
           + DM LGF++YSYGRALGRKRVVVSNN+       S+PV  PLKR+CSGRF   SE+SRL
Sbjct: 7   VSDMTLGFDTYSYGRALGRKRVVVSNND---EAFESNPVTVPLKRMCSGRFDTISEKSRL 63

Query: 297 EALPQDVLVRVLCGVDHEDLEQLLHVSKTIREAAEIAKRMHFEYSTPKKKTFAFLAPVDL 476
           EALPQD+LVRVLCGVDH+DLE L +VS TI+EA EIAK+MHFE+STPKK + A  +P D+
Sbjct: 64  EALPQDLLVRVLCGVDHDDLEHLFNVSTTIKEAGEIAKQMHFEFSTPKKSSVAVRSPFDI 123

Query: 477 GDASGF-EEIETPKAPL--RKSKARLNGGNLAGISVALFA 587
              +GF +EIE P APL  +KSK RL+   LAGISV+LFA
Sbjct: 124 --ENGFDDEIEAPNAPLMSKKSKPRLSANKLAGISVSLFA 161


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