BLASTX nr result

ID: Glycyrrhiza24_contig00018950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018950
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   221   5e-56
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   218   5e-55
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...   215   3e-54
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...   171   6e-41
emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   105   4e-21

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
           gi|355478639|gb|AES59842.1| Replication factor C large
           subunit [Medicago truncatula]
          Length = 1178

 Score =  221 bits (563), Expect = 5e-56
 Identities = 116/169 (68%), Positives = 127/169 (75%), Gaps = 1/169 (0%)
 Frame = -1

Query: 508 NLDNFRSTLKPSSAAISQNAL-YCSDKLSIQPDNMMEKSPANSAVLANEQPACPLKPEDA 332
           N DNF S +K SS +ISQNAL Y  DKL  Q ++MME  P NSAV  NE    P KPEDA
Sbjct: 179 NFDNFHSGVKSSSTSISQNALSYSDDKLPTQSEHMMEMLPENSAV-DNE----PAKPEDA 233

Query: 331 IVDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQESMRSYYHSCEHKAEGSLWIHKYKPTKA 152
           IVDLE DE ST+SGQ C   KSD EPPSR     M S+  SCE KAE SLWIHKYKPTKA
Sbjct: 234 IVDLEMDEASTISGQACNTGKSDAEPPSR-----MSSFCQSCEDKAESSLWIHKYKPTKA 288

Query: 151 FEVCGNDESLNFLRDWLHLWYERRYQSRKDSSNKDQTDMPNDDDDYNCS 5
            EVCGNDESLNFLRDWLH W+ERRYQ+RKDSSNKDQTD+P+ D DYNC+
Sbjct: 289 SEVCGNDESLNFLRDWLHHWHERRYQNRKDSSNKDQTDIPDGDGDYNCA 337


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  218 bits (554), Expect = 5e-55
 Identities = 111/168 (66%), Positives = 128/168 (76%)
 Frame = -1

Query: 508 NLDNFRSTLKPSSAAISQNALYCSDKLSIQPDNMMEKSPANSAVLANEQPACPLKPEDAI 329
           N D  RS+L PS  +ISQNAL  SD+L I P+N+ E SP++SA LA +   CP   EDA 
Sbjct: 218 NFDKLRSSLDPSGVSISQNAL-SSDRLCIHPENLEEVSPSDSASLAEK--TCPPTCEDAK 274

Query: 328 VDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQESMRSYYHSCEHKAEGSLWIHKYKPTKAF 149
            DLE DE  T + Q  IFRKSDTEPPSRFLQESMRSYY SC  KAE SLW +KYKPTKA 
Sbjct: 275 QDLEVDESVTTTVQAGIFRKSDTEPPSRFLQESMRSYYRSCVDKAENSLWTYKYKPTKAV 334

Query: 148 EVCGNDESLNFLRDWLHLWYERRYQSRKDSSNKDQTDMPNDDDDYNCS 5
           EVCGNDES+NFLRDWLHLW+ERRY+SRKD S+ D++DM + DDDY CS
Sbjct: 335 EVCGNDESVNFLRDWLHLWHERRYKSRKDISDMDKSDMRDVDDDYKCS 382


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score =  215 bits (548), Expect = 3e-54
 Identities = 111/171 (64%), Positives = 130/171 (76%), Gaps = 3/171 (1%)
 Frame = -1

Query: 508 NLDNFRSTLKPSSAAISQNALYCSDKLSIQPDNMMEKSPANSAVLANEQPACPLKPEDAI 329
           N D  RS+L PS  +ISQN+L  SD+L I P+N+ E SP+NSA LA +   CP   EDA 
Sbjct: 219 NFDKLRSSLYPSGTSISQNSL-SSDRLCIHPENLEELSPSNSASLAKQ--TCPPTCEDAK 275

Query: 328 VDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQESMRSYYHSCEHKAEGSLWIHKYKPTKAF 149
           +DLE DE +T + Q  IFRKSDTEPP RFLQESMRSYY SC  KAE SLW +KYKPTKA 
Sbjct: 276 LDLEVDESATTTVQAGIFRKSDTEPPIRFLQESMRSYYCSCVDKAENSLWTYKYKPTKAV 335

Query: 148 EVCGNDESLNFLRDWLHLWYERRYQSRKDSSNKDQTDM---PNDDDDYNCS 5
           EVCGNDES+NFLRDWLHLW+ERRY+SRKD S+ D++DM    +DDDDY CS
Sbjct: 336 EVCGNDESVNFLRDWLHLWHERRYKSRKDISDMDKSDMRDVGDDDDDYKCS 386


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
           gi|355490091|gb|AES71294.1| ATPase family AAA
           domain-containing protein [Medicago truncatula]
          Length = 1283

 Score =  171 bits (433), Expect = 6e-41
 Identities = 91/170 (53%), Positives = 108/170 (63%), Gaps = 1/170 (0%)
 Frame = -1

Query: 508 NLDNFRSTLKPSSAAISQNALYCSDKLSIQPDNMMEKSPANSAVLANEQPACPLKPEDAI 329
           N +   STL P++A+   NA    D  S+ P+N+ E           EQ      P+DA 
Sbjct: 227 NFEKILSTLNPAAASNFHNASTSLDSFSVLPENLQE---------TEEQTISASMPKDAK 277

Query: 328 VDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQESMRSYYHSCEHKAEGSLWIHKYKPTKAF 149
           VD   DE    S Q   FRKS TEP SRFLQESMRS Y  CE KAEGSLW ++YKPTKA 
Sbjct: 278 VDFGVDESLAFSLQAGYFRKSYTEPLSRFLQESMRSSYVGCEDKAEGSLWTYRYKPTKAV 337

Query: 148 EVCGNDESLNFLRDWLHLWYERRYQSRKDSSNKDQTDM-PNDDDDYNCSD 2
           EVCGNDE++NFL DWLH W+ERRY+ RKD+SN+D   M  +DDDDY CSD
Sbjct: 338 EVCGNDEAMNFLSDWLHQWHERRYKPRKDTSNRDTRIMQDDDDDDYICSD 387


>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/137 (40%), Positives = 78/137 (56%)
 Frame = -1

Query: 412 NMMEKSPANSAVLANEQPACPLKPEDAIVDLEEDEVSTVSGQVCIFRKSDTEPPSRFLQE 233
           N+ E S   S + ANEQ       ++   + E + +   +G     R  D  PPSR LQE
Sbjct: 185 NLHEISTPCSTMSANEQVPYHQLSKNMEGNQEGNHIGFFTGDSGCGRNIDAMPPSRLLQE 244

Query: 232 SMRSYYHSCEHKAEGSLWIHKYKPTKAFEVCGNDESLNFLRDWLHLWYERRYQSRKDSSN 53
           SM  YY  C ++ E SLWI+KY+P KA EVCGN ES+  L +WLHLW+E+  QS K ++ 
Sbjct: 245 SMMPYYLGCGNQPEDSLWINKYQPEKAIEVCGNGESVKLLSEWLHLWHEKDSQSSKKATG 304

Query: 52  KDQTDMPNDDDDYNCSD 2
            D+  M + D+ +  SD
Sbjct: 305 GDKCIMQDSDNSFYGSD 321


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