BLASTX nr result

ID: Glycyrrhiza24_contig00018915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018915
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815...   170   1e-40
ref|XP_003523658.1| PREDICTED: uncharacterized protein LOC100807...   166   2e-39
gb|AFK35091.1| unknown [Lotus japonicus]                              162   3e-38
ref|XP_003603237.1| DNA topoisomerase 2-binding protein [Medicag...   161   5e-38
ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262...   152   3e-35

>ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815253 [Glycine max]
          Length = 541

 Score =  170 bits (430), Expect = 1e-40
 Identities = 92/118 (77%), Positives = 92/118 (77%), Gaps = 3/118 (2%)
 Frame = -2

Query: 348 GKGCXXXXXXXXXXXRGLQPLEPMXXXXXXXXXXXS-APFAGLVICVTGLSKEARNQVME 172
           GKGC           RGLQPLEPM           S APFAGLVICVTGLSKEARNQVME
Sbjct: 12  GKGCSRLFSSSIPSFRGLQPLEPMSPASSPLQVPSSTAPFAGLVICVTGLSKEARNQVME 71

Query: 171 ATERLGGQYSPNLHPQCTHLVVQ--SFGGRKFEHALKHGAKIGLFVVTLGWFVDSVRK 4
           ATERLGGQYSPNLHPQCTHLVVQ  SFGGRKFEHALKHGAK GLFVVTLGWFVDSVRK
Sbjct: 72  ATERLGGQYSPNLHPQCTHLVVQIYSFGGRKFEHALKHGAKNGLFVVTLGWFVDSVRK 129


>ref|XP_003523658.1| PREDICTED: uncharacterized protein LOC100807358 [Glycine max]
          Length = 542

 Score =  166 bits (419), Expect = 2e-39
 Identities = 89/120 (74%), Positives = 92/120 (76%), Gaps = 4/120 (3%)
 Frame = -2

Query: 348 GKGCXXXXXXXXXXXRGLQPLEPMXXXXXXXXXXXSA-PFAGLVICVTGLSKEARNQVME 172
           GKGC           RGLQPLEPM           S  PFAGLVICVTGLSKEARNQVME
Sbjct: 12  GKGCSRLFSSSLPSFRGLQPLEPMSPASSPLQVPSSTTPFAGLVICVTGLSKEARNQVME 71

Query: 171 ATERLGGQYSPNLHPQCTHLVVQ---SFGGRKFEHALKHGAKIGLFVVTLGWFVDSVRKN 1
           AT+RLGGQYSPNLHP+CTHLVVQ   SFGGRKFEHALKHGAK GLFVVTLGWFVDSVRK+
Sbjct: 72  ATDRLGGQYSPNLHPRCTHLVVQISFSFGGRKFEHALKHGAKNGLFVVTLGWFVDSVRKS 131


>gb|AFK35091.1| unknown [Lotus japonicus]
          Length = 529

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/116 (72%), Positives = 86/116 (74%)
 Frame = -2

Query: 348 GKGCXXXXXXXXXXXRGLQPLEPMXXXXXXXXXXXSAPFAGLVICVTGLSKEARNQVMEA 169
           GKGC            GLQP+EP+           SAPFAGLVICVTGLSKE RNQV EA
Sbjct: 12  GKGCSRLFSSSFR---GLQPMEPVSPASSSSRVRSSAPFAGLVICVTGLSKETRNQVREA 68

Query: 168 TERLGGQYSPNLHPQCTHLVVQSFGGRKFEHALKHGAKIGLFVVTLGWFVDSVRKN 1
           TERLGGQYS NLHPQCTHLVVQSFGGRK EHALKHGAK GL V TLGWFVDSVRKN
Sbjct: 69  TERLGGQYSSNLHPQCTHLVVQSFGGRKLEHALKHGAKNGLLVATLGWFVDSVRKN 124


>ref|XP_003603237.1| DNA topoisomerase 2-binding protein [Medicago truncatula]
           gi|355492285|gb|AES73488.1| DNA topoisomerase 2-binding
           protein [Medicago truncatula]
          Length = 570

 Score =  161 bits (408), Expect = 5e-38
 Identities = 85/116 (73%), Positives = 87/116 (75%)
 Frame = -2

Query: 348 GKGCXXXXXXXXXXXRGLQPLEPMXXXXXXXXXXXSAPFAGLVICVTGLSKEARNQVMEA 169
           GKGC             LQPL+ M           +APFAGLVICVTGLSKEARNQVMEA
Sbjct: 19  GKGCSRLFSSSIR---NLQPLDQMSPVSSSPQLPSNAPFAGLVICVTGLSKEARNQVMEA 75

Query: 168 TERLGGQYSPNLHPQCTHLVVQSFGGRKFEHALKHGAKIGLFVVTLGWFVDSVRKN 1
           TERLGGQYSPNLHPQCTHL V SFGGRKFEHALKHG K GLFVVTLGWFVDSVRKN
Sbjct: 76  TERLGGQYSPNLHPQCTHL-VHSFGGRKFEHALKHGTKNGLFVVTLGWFVDSVRKN 130


>ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262753 isoform 2 [Vitis
           vinifera]
          Length = 546

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/100 (75%), Positives = 81/100 (81%)
 Frame = -2

Query: 300 GLQPLEPMXXXXXXXXXXXSAPFAGLVICVTGLSKEARNQVMEATERLGGQYSPNLHPQC 121
           GL+  EPM             PF+GLVICVTGLSKEAR QVM+A ERLGGQYSPNLHPQC
Sbjct: 35  GLKTFEPMSPASSSVGRSN-GPFSGLVICVTGLSKEARKQVMDAAERLGGQYSPNLHPQC 93

Query: 120 THLVVQSFGGRKFEHALKHGAKIGLFVVTLGWFVDSVRKN 1
           THLVVQSFGGRK +HALKHG+K GLFVVTLGWFVDSVR+N
Sbjct: 94  THLVVQSFGGRKLDHALKHGSKNGLFVVTLGWFVDSVRRN 133


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