BLASTX nr result

ID: Glycyrrhiza24_contig00018910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018910
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago ...   233   1e-59
ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   222   2e-56
emb|CBI40732.3| unnamed protein product [Vitis vinifera]              189   2e-46
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]   189   2e-46
ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...   184   9e-45

>ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
           gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355486664|gb|AES67867.1|
           hypothetical protein MTR_2g100200 [Medicago truncatula]
          Length = 527

 Score =  233 bits (594), Expect = 1e-59
 Identities = 115/133 (86%), Positives = 122/133 (91%)
 Frame = +1

Query: 1   GRAGRMDEAVEVFCNMKEKDTATYNAMIFNFISIGDLDECMKYYNGMLSDNCEPNLDTYT 180
           GRAGRMDEAVEVF +MKEKDTA YNAMIFNFISIGD D  MKYYNGMLSDNCEPN+ TY+
Sbjct: 286 GRAGRMDEAVEVFGSMKEKDTAIYNAMIFNFISIGDFDGFMKYYNGMLSDNCEPNIHTYS 345

Query: 181 RIITAFLRTRKVADALEMFDEMSRQGVVPSTGTITSFLRRLCSYGPPYAAMMIYKKARKL 360
           R+ITAFLRTRKVADAL MFDEM RQGVVP TGTITSF+++LCSYGPPYAAMMIYKK RKL
Sbjct: 346 RMITAFLRTRKVADALLMFDEMLRQGVVPPTGTITSFIKQLCSYGPPYAAMMIYKKTRKL 405

Query: 361 GCKISMEAYKILL 399
            CKISMEAYKILL
Sbjct: 406 ECKISMEAYKILL 418


>ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g43820-like [Glycine max]
          Length = 505

 Score =  222 bits (566), Expect = 2e-56
 Identities = 107/137 (78%), Positives = 119/137 (86%), Gaps = 4/137 (2%)
 Frame = +1

Query: 1   GRAGRMDEAVEVFCNMKEK----DTATYNAMIFNFISIGDLDECMKYYNGMLSDNCEPNL 168
           GR GRMDEAVE+ C MKE     DT TYNA+IFNF+S+GD +EC+KYYN MLSDNCEPNL
Sbjct: 260 GREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGDFEECIKYYNRMLSDNCEPNL 319

Query: 169 DTYTRIITAFLRTRKVADALEMFDEMSRQGVVPSTGTITSFLRRLCSYGPPYAAMMIYKK 348
           DTY R+I  FLR RKVADAL MFDEM R+GVVPSTGTIT+F++RLCSYGPPYAA+MIYKK
Sbjct: 320 DTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGTITTFIKRLCSYGPPYAALMIYKK 379

Query: 349 ARKLGCKISMEAYKILL 399
           ARKLGC ISMEAYKILL
Sbjct: 380 ARKLGCVISMEAYKILL 396


>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/137 (64%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
 Frame = +1

Query: 1   GRAGRMDEAVEVFCNMKEK----DTATYNAMIFNFISIGDLDECMKYYNGMLSDNCEPNL 168
           GRAGR+D+AVEVF +M+E     +   YNA+I NFIS  D DEC+KYYN M+S NC+PN+
Sbjct: 275 GRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNM 334

Query: 169 DTYTRIITAFLRTRKVADALEMFDEMSRQGVVPSTGTITSFLRRLCSYGPPYAAMMIYKK 348
           DTYT++I AFL+ RKVADALEM DEM  +G++P+TG ITSF+  LC YGPP+AAMMIYKK
Sbjct: 335 DTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKK 394

Query: 349 ARKLGCKISMEAYKILL 399
           ARK+GC+IS+ AYK+LL
Sbjct: 395 ARKVGCRISLSAYKLLL 411


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/137 (64%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
 Frame = +1

Query: 1   GRAGRMDEAVEVFCNMKEK----DTATYNAMIFNFISIGDLDECMKYYNGMLSDNCEPNL 168
           GRAGR+D+AVEVF +M+E     +   YNA+I NFIS  D DEC+KYYN M+S NC+PN+
Sbjct: 316 GRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNM 375

Query: 169 DTYTRIITAFLRTRKVADALEMFDEMSRQGVVPSTGTITSFLRRLCSYGPPYAAMMIYKK 348
           DTYT++I AFL+ RKVADALEM DEM  +G++P+TG ITSF+  LC YGPP+AAMMIYKK
Sbjct: 376 DTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKK 435

Query: 349 ARKLGCKISMEAYKILL 399
           ARK+GC+IS+ AYK+LL
Sbjct: 436 ARKVGCRISLSAYKLLL 452


>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  184 bits (466), Expect = 9e-45
 Identities = 86/137 (62%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
 Frame = +1

Query: 1   GRAGRMDEAVEVFCNMKEK----DTATYNAMIFNFISIGDLDECMKYYNGMLSDNCEPNL 168
           GRAG++++AV +F +M+EK    DT  YNAMI NFIS+G+ DECMKYY  +LS NC+PN+
Sbjct: 318 GRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNI 377

Query: 169 DTYTRIITAFLRTRKVADALEMFDEMSRQGVVPSTGTITSFLRRLCSYGPPYAAMMIYKK 348
           DTYTR+I+  ++  KVADALEMFDEM  +G+V  TGT+TSF+  LCS+GPP+AAM+IY K
Sbjct: 378 DTYTRMISGLIKASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFGPPHAAMVIYTK 437

Query: 349 ARKLGCKISMEAYKILL 399
           ARK+GCKIS+ AYK+LL
Sbjct: 438 ARKVGCKISLSAYKLLL 454


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