BLASTX nr result

ID: Glycyrrhiza24_contig00018880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018880
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR86717.1| zinc finger protein [Populus euphratica]               183   1e-44
emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera]   103   1e-31
ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula...    91   2e-21
ref|XP_002520031.1| conserved hypothetical protein [Ricinus comm...   102   3e-20
ref|XP_002523006.1| conserved hypothetical protein [Ricinus comm...    94   1e-17

>gb|AAR86717.1| zinc finger protein [Populus euphratica]
          Length = 218

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/95 (92%), Positives = 88/95 (92%)
 Frame = -1

Query: 285 TNANGCKPRSSETPSADHTERDESAGNASWRSGVKHP*RYEKRGRDDIIYVRTAPRGVDP 106
           TNANGCK R SETPSADHTER ESAGNASWRSGVKHP RYEKRGRDDIIYVRTAPRGVDP
Sbjct: 2   TNANGCKLRCSETPSADHTERHESAGNASWRSGVKHPMRYEKRGRDDIIYVRTAPRGVDP 61

Query: 105 ASNQVFDQGTG*FPLPLEGQPGRERGGNGLPKKPA 1
           AS QVFDQGTG FPLPL GQPGRERGGNGLPKKPA
Sbjct: 62  ASTQVFDQGTGKFPLPLAGQPGRERGGNGLPKKPA 96


>emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera]
          Length = 194

 Score =  103 bits (256), Expect(2) = 1e-31
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = -1

Query: 162 KRGRDDIIYVRTAPRGVDPASNQVFDQGTG*FPLPLEGQPGRERGGNGLPKKPA 1
           +RGRD II VRTAPRGVDPASNQVFDQGTG FPLPL GQPGRERGGNGLPKKPA
Sbjct: 30  ERGRDHIINVRTAPRGVDPASNQVFDQGTGEFPLPLAGQPGRERGGNGLPKKPA 83



 Score = 58.2 bits (139), Expect(2) = 1e-31
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -2

Query: 281 MRMGVSLAARKHPVLTTLRETKAQVTPVGE 192
           MRMGVSL ARKHPVLTTLR+TKAQVTPVGE
Sbjct: 1   MRMGVSLDARKHPVLTTLRDTKAQVTPVGE 30


>ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula]
           gi|355477331|gb|AES58534.1| Cytochrome c biogenesis
           [Medicago truncatula]
          Length = 860

 Score = 90.5 bits (223), Expect(2) = 2e-21
 Identities = 47/48 (97%), Positives = 47/48 (97%)
 Frame = -2

Query: 263 LAARKHPVLTTLRETKAQVTPVGEVALSIPSGTKREVVMISSTSVPLL 120
           LAARKHPVLTTLRETKAQV PVGEVALSIPSGTKREVVMISSTSVPLL
Sbjct: 297 LAARKHPVLTTLRETKAQVMPVGEVALSIPSGTKREVVMISSTSVPLL 344



 Score = 37.0 bits (84), Expect(2) = 2e-21
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 45  PGRERGGNGLPKKPA 1
           PGRERGGNGLPKKPA
Sbjct: 345 PGRERGGNGLPKKPA 359


>ref|XP_002520031.1| conserved hypothetical protein [Ricinus communis]
           gi|223540795|gb|EEF42355.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/79 (65%), Positives = 56/79 (70%)
 Frame = -1

Query: 237 DHTERDESAGNASWRSGVKHP*RYEKRGRDDIIYVRTAPRGVDPASNQVFDQGTG*FPLP 58
           +HTER ESAGN SWRSGVKH  RYEKRGRDDIIY+   PRGV+P+S QVFDQ TG FPL 
Sbjct: 70  NHTERHESAGNTSWRSGVKHLKRYEKRGRDDIIYICITPRGVNPSSKQVFDQRTGEFPLL 129

Query: 57  LEGQPGRERGGNGLPKKPA 1
           L GQ      G   PK  A
Sbjct: 130 LAGQLAVSVVGTDFPKSQA 148


>ref|XP_002523006.1| conserved hypothetical protein [Ricinus communis]
           gi|223537818|gb|EEF39436.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 58

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = -2

Query: 272 GVSLAARKHPVLTTLRETKAQVTPVGEVALSIPSGTKREVVMISSTSVPLLAE 114
           GVS +ARKHPVLTTLR+TKAQVTPVGEVALSIPSGTKREVVMISST VPLL E
Sbjct: 6   GVSFSARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTFVPLLVE 58