BLASTX nr result

ID: Glycyrrhiza24_contig00018855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018855
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45270.1| unknown [Lotus japonicus]                              172   3e-41
ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E...   164   7e-39
gb|AFK35955.1| unknown [Medicago truncatula]                          157   8e-37
ref|XP_003600356.1| Cellulose synthase-like protein E1 [Medicago...   156   1e-36
ref|XP_003600355.1| Cellulose synthase-like protein E1 [Medicago...   156   1e-36

>gb|AFK45270.1| unknown [Lotus japonicus]
          Length = 213

 Score =  172 bits (435), Expect = 3e-41
 Identities = 79/106 (74%), Positives = 87/106 (82%), Gaps = 1/106 (0%)
 Frame = +2

Query: 20  SGEYCP-LFETRRGRGRLIYRPFAISLLVAICFIWVYRFSHIINTHDEDGKYYWVWVGML 196
           SG+ C  LFET RGRGR IYRPFAISL VAICFIW YRF+HI  T +ED    W W+G+L
Sbjct: 4   SGDECSQLFETTRGRGRFIYRPFAISLFVAICFIWAYRFTHITTTTEEDTAKCWAWLGLL 63

Query: 197 GAELWFGFYWILTQPLRWNLVFRQPFNNTLSQRYENMLPGVDIFVC 334
           GA+LWFGFYWILTQ LRWNLVFRQPFN  LSQRYE++LP VDIFVC
Sbjct: 64  GADLWFGFYWILTQSLRWNLVFRQPFNARLSQRYEDVLPAVDIFVC 109


>ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E1-like [Glycine max]
          Length = 736

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/103 (76%), Positives = 82/103 (79%)
 Frame = +2

Query: 26  EYCPLFETRRGRGRLIYRPFAISLLVAICFIWVYRFSHIINTHDEDGKYYWVWVGMLGAE 205
           EY PLFETRR RGR IYR FAISL VAICFIW YRFSHI  T  EDG   W W+GML +E
Sbjct: 5   EYSPLFETRRCRGRFIYRSFAISLFVAICFIWHYRFSHI--TKGEDGN--WAWLGMLASE 60

Query: 206 LWFGFYWILTQPLRWNLVFRQPFNNTLSQRYENMLPGVDIFVC 334
           LWFGFYW+LTQ LRWNLVFRQPF N LSQRYE  LP VDIFVC
Sbjct: 61  LWFGFYWVLTQALRWNLVFRQPFKNRLSQRYEKKLPRVDIFVC 103


>gb|AFK35955.1| unknown [Medicago truncatula]
          Length = 240

 Score =  157 bits (397), Expect = 8e-37
 Identities = 76/108 (70%), Positives = 86/108 (79%), Gaps = 4/108 (3%)
 Frame = +2

Query: 23  GEYCPLFETRRGRGRLIYRPFAISLLVAICFIWVYRFSHIINTH----DEDGKYYWVWVG 190
           G Y PLFET++GRGRLIYR F+ISL  AI FIW+YRF+HII T+    +EDG    VW+G
Sbjct: 6   GVYSPLFETKKGRGRLIYRLFSISLFTAISFIWLYRFNHIITTNYTQQEEDGGKL-VWLG 64

Query: 191 MLGAELWFGFYWILTQPLRWNLVFRQPFNNTLSQRYENMLPGVDIFVC 334
           ML AELWFGFYW LTQ  RWNLVFRQPF + LSQRYE+MLP VDIFVC
Sbjct: 65  MLAAELWFGFYWFLTQAFRWNLVFRQPFKDRLSQRYEHMLPEVDIFVC 112


>ref|XP_003600356.1| Cellulose synthase-like protein E1 [Medicago truncatula]
           gi|355489404|gb|AES70607.1| Cellulose synthase-like
           protein E1 [Medicago truncatula]
          Length = 759

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/108 (70%), Positives = 85/108 (78%), Gaps = 4/108 (3%)
 Frame = +2

Query: 23  GEYCPLFETRRGRGRLIYRPFAISLLVAICFIWVYRFSHIINTH----DEDGKYYWVWVG 190
           G Y PLFET++GRGRLIYR F+ISL  AI FIW+YRF+HII T+    +EDG    VW G
Sbjct: 6   GVYSPLFETKKGRGRLIYRLFSISLFTAISFIWLYRFNHIITTNYTQQEEDGGKL-VWFG 64

Query: 191 MLGAELWFGFYWILTQPLRWNLVFRQPFNNTLSQRYENMLPGVDIFVC 334
           ML AELWFGFYW LTQ  RWNLVFRQPF + LSQRYE+MLP VDIFVC
Sbjct: 65  MLAAELWFGFYWFLTQAFRWNLVFRQPFKDRLSQRYEHMLPEVDIFVC 112


>ref|XP_003600355.1| Cellulose synthase-like protein E1 [Medicago truncatula]
           gi|355489403|gb|AES70606.1| Cellulose synthase-like
           protein E1 [Medicago truncatula]
          Length = 584

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/108 (70%), Positives = 85/108 (78%), Gaps = 4/108 (3%)
 Frame = +2

Query: 23  GEYCPLFETRRGRGRLIYRPFAISLLVAICFIWVYRFSHIINTH----DEDGKYYWVWVG 190
           G Y PLFET++GRGRLIYR F+ISL  AI FIW+YRF+HII T+    +EDG    VW G
Sbjct: 6   GVYSPLFETKKGRGRLIYRLFSISLFTAISFIWLYRFNHIITTNYTQQEEDGGKL-VWFG 64

Query: 191 MLGAELWFGFYWILTQPLRWNLVFRQPFNNTLSQRYENMLPGVDIFVC 334
           ML AELWFGFYW LTQ  RWNLVFRQPF + LSQRYE+MLP VDIFVC
Sbjct: 65  MLAAELWFGFYWFLTQAFRWNLVFRQPFKDRLSQRYEHMLPEVDIFVC 112


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