BLASTX nr result

ID: Glycyrrhiza24_contig00018847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018847
         (1676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ...   537   e-150
ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   511   e-142
ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   491   e-136
ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   396   e-108
ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula] ...   333   1e-88

>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 956

 Score =  537 bits (1384), Expect = e-150
 Identities = 256/332 (77%), Positives = 285/332 (85%)
 Frame = -1

Query: 1673 PHILLYYQRFSHLPPLERPALPIDTSASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEYN 1494
            PHIL YYQ +SHLP  +RP LPID SASDGMNGF WSYERNV RTVV SPIKGL+DI  N
Sbjct: 626  PHILFYYQNYSHLPHQQRPVLPIDPSASDGMNGFLWSYERNVFRTVVSSPIKGLQDIACN 685

Query: 1493 QVLNITYLKPRSHKHIPKPPDGVVMPKKILKALDIKPLPMLWHEDNSSRRQQGRERAQVP 1314
            QVLNITYL PR+H+HIPKPPDGVVMP+KIL+ALDIKPLP+LWHEDNS RR Q RER QVP
Sbjct: 686  QVLNITYLNPRTHRHIPKPPDGVVMPQKILRALDIKPLPVLWHEDNS-RRHQARERQQVP 744

Query: 1313 GSIAGSQLGEAAHRLVKNSLRLNNTSHGLSEQFPGHHTMNRLRSTGASGSGKYYGEDTSG 1134
            G+IAG QLGEAAHRLV+NSL+ NN +    +QFP  HTMNR+R TGASGSGKYYGE++SG
Sbjct: 745  GAIAGPQLGEAAHRLVRNSLQFNNNT-SYPDQFPSQHTMNRVRPTGASGSGKYYGEESSG 803

Query: 1133 YYGNYYNHQGIITRPRFPVSSNGGQYDRQNFRMQDRSQHYDQFHNMKTGFYASTIDEGMR 954
            YYG  YN QG++TRPRFP++SNG Q DRQN R+QDRSQH++QFHNMKTGF A TIDEG+R
Sbjct: 804  YYGQNYNPQGMMTRPRFPIASNGWQNDRQNIRIQDRSQHHEQFHNMKTGFQALTIDEGVR 863

Query: 953  PRSSAVPSPKAPAMMLSRLPNSGHTNIPQHQFVQNVGPPIPPPKWISKAPDTNGIYARHQ 774
            PRSSAVPSPK PAMML R  NSGHT   Q QFVQN+GPPIPPP WISKAPDTNG+YARHQ
Sbjct: 864  PRSSAVPSPKTPAMMLMRPQNSGHTTNLQPQFVQNIGPPIPPPNWISKAPDTNGMYARHQ 923

Query: 773  EAALGGAYDKPMKVVYQVKTHKPQDMPEHGNQ 678
            EAA+GGAYDKP+K VYQ+KT  PQDMPE GNQ
Sbjct: 924  EAAVGGAYDKPIKKVYQIKTRNPQDMPEQGNQ 955


>ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 960

 Score =  511 bits (1315), Expect = e-142
 Identities = 245/335 (73%), Positives = 273/335 (81%), Gaps = 2/335 (0%)
 Frame = -1

Query: 1676 APHILLYYQRFSHLPPLERPALPIDTSASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEY 1497
            APHIL Y+Q    LP  ERPALPID  ASDGMNG+ W YERNVLRT V SPIKGL+DIE+
Sbjct: 627  APHILSYHQYSCQLPLHERPALPIDPRASDGMNGYLWLYERNVLRTTVSSPIKGLQDIEF 686

Query: 1496 NQVLNITYLKPRSHKHIPKPPDGVVMPKKILKALDIKPLPMLWHEDNSSRRQQGRERAQV 1317
            NQVLNITYL PR H+HIPKPPDGV+MPKKILKA+DIKP P+LWHEDNS RRQ GRER QV
Sbjct: 687  NQVLNITYLNPRKHRHIPKPPDGVLMPKKILKAIDIKPFPVLWHEDNSGRRQ-GRERQQV 745

Query: 1316 PGSIAGSQLGEAAHRLVKNSLRL--NNTSHGLSEQFPGHHTMNRLRSTGASGSGKYYGED 1143
             G++AG QLGEAAHRLVKNSL +  NN  +G  EQFPGHH MNRLRS G SGSGKYYGED
Sbjct: 746  HGAMAGPQLGEAAHRLVKNSLNIKSNNMPYGSPEQFPGHHAMNRLRSAGPSGSGKYYGED 805

Query: 1142 TSGYYGNYYNHQGIITRPRFPVSSNGGQYDRQNFRMQDRSQHYDQFHNMKTGFYASTIDE 963
            TSGYYG +YNHQGIITRPR+PVSSNGG  D+QNFR+QDRS H+DQ++N  TGFY   ++E
Sbjct: 806  TSGYYGQHYNHQGIITRPRYPVSSNGGHNDKQNFRIQDRSYHHDQYYNGTTGFYTMAMEE 865

Query: 962  GMRPRSSAVPSPKAPAMMLSRLPNSGHTNIPQHQFVQNVGPPIPPPKWISKAPDTNGIYA 783
            G R R  AVP P+ PA+ LSR PNSG T   QHQFVQN+GPPIPPP WI++ PDTNGIYA
Sbjct: 866  GARARPYAVPLPRTPAVTLSRPPNSGSTTNGQHQFVQNMGPPIPPPNWITRVPDTNGIYA 925

Query: 782  RHQEAALGGAYDKPMKVVYQVKTHKPQDMPEHGNQ 678
             HQE ALGG YDK    VYQVKT +PQDMPE+GNQ
Sbjct: 926  GHQETALGGTYDKQNMKVYQVKTRQPQDMPEYGNQ 960


>ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 957

 Score =  491 bits (1264), Expect = e-136
 Identities = 238/335 (71%), Positives = 271/335 (80%), Gaps = 2/335 (0%)
 Frame = -1

Query: 1676 APHILLYYQRFSHLPPLERPALPIDTSASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEY 1497
            APHIL YYQ    LP  ERPA PID   SDGMNG+ W YERNVLRT+V SPIKGL+DIE+
Sbjct: 625  APHILSYYQYSCQLPLHERPAQPIDPRVSDGMNGYLWLYERNVLRTIVSSPIKGLQDIEF 684

Query: 1496 NQVLNITYLKPRSHKHIPKPPDGVVMPKKILKALDIKPLPMLWHEDNSSRRQQGRERAQV 1317
            NQVLNITYL PR H+HIPK PDGV+MPKKILKA+DIKP P+LWHE+NS RRQ GRER QV
Sbjct: 685  NQVLNITYLNPRKHRHIPKAPDGVLMPKKILKAIDIKPFPVLWHEENSGRRQ-GRER-QV 742

Query: 1316 PGSIAGSQLGEAAHRLVKNSLRL--NNTSHGLSEQFPGHHTMNRLRSTGASGSGKYYGED 1143
             G++AG QLGEAAHRLVKNSL +  NN  +G  EQFPGHH MNRLRS G SG GKYY ED
Sbjct: 743  HGAMAGPQLGEAAHRLVKNSLNIKSNNMPYGSPEQFPGHHAMNRLRSAGPSGYGKYYVED 802

Query: 1142 TSGYYGNYYNHQGIITRPRFPVSSNGGQYDRQNFRMQDRSQHYDQFHNMKTGFYASTIDE 963
             SGYYG   NHQG+ITRPR+PVSSNGG  ++QNFR+QDRSQH++Q++N +TGF+  T++E
Sbjct: 803  KSGYYGQQNNHQGMITRPRYPVSSNGGNNEKQNFRIQDRSQHHEQYYNGRTGFHTMTMEE 862

Query: 962  GMRPRSSAVPSPKAPAMMLSRLPNSGHTNIPQHQFVQNVGPPIPPPKWISKAPDTNGIYA 783
            G RPR  AVPSP+   +MLSR PNSG T   QHQFVQN+GPPIPPP WI++APDTNGIYA
Sbjct: 863  GARPRPYAVPSPRTQVVMLSRSPNSGPTTNGQHQFVQNMGPPIPPPNWITRAPDTNGIYA 922

Query: 782  RHQEAALGGAYDKPMKVVYQVKTHKPQDMPEHGNQ 678
             HQE ALGGAYDK    VYQ KT +PQDMPE+GNQ
Sbjct: 923  WHQETALGGAYDKQHIKVYQAKTRQPQDMPEYGNQ 957


>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score =  396 bits (1018), Expect = e-108
 Identities = 209/336 (62%), Positives = 245/336 (72%), Gaps = 3/336 (0%)
 Frame = -1

Query: 1676 APHILLYYQRFSHLPPLERPALPIDTSASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEY 1497
            A HIL YY   S LPP ER   PIDT+AS GMNG+ W  ERNV  +V+ SPI GL+DIEY
Sbjct: 620  AAHILSYYHVCSQLPPHERCVQPIDTNASGGMNGYLWLCERNVFSSVISSPISGLQDIEY 679

Query: 1496 NQVLNITYLKPRSHKHIPKPPDGVVMPKKILKALDIKPLPMLWHEDNSSRRQQGRERAQV 1317
            NQVLNIT+L PR H HIPKPPDGVV+PKK+LKA+DIKP P+LWHEDN  +RQQ RER QV
Sbjct: 680  NQVLNITFLNPRRHDHIPKPPDGVVIPKKVLKAIDIKPFPVLWHEDNIGQRQQARERLQV 739

Query: 1316 PGSIAGSQLGEAAHRLVKNSLRL--NNTSHGLSEQFPGHHTMNRLRSTGASGSGKYYGED 1143
            PG+IAGSQLGEAAHRLVKN+L +  NNTSHGL EQ P HHTMNR RS   +G GKYYGE+
Sbjct: 740  PGAIAGSQLGEAAHRLVKNTLNIKSNNTSHGLLEQPPVHHTMNRHRS---AGYGKYYGEN 796

Query: 1142 TSGYYGNYYNHQGIITRPRFPVSSNGGQYDRQNFRMQDRSQHYDQFHNMKTGFYASTIDE 963
            TSGYYG  YNH G ITRP++     GGQ DRQN ++QDR  + +QFHN K+ F A T++E
Sbjct: 797  TSGYYGQ-YNHHG-ITRPKY-----GGQNDRQNLKIQDRLHNQEQFHNTKSEFVALTMEE 849

Query: 962  GMRPRSSAVPSPKAPAMMLSRLPNSGHTNIPQHQFVQNVGPPIPPPKWISKAPDTNGIYA 783
            G RPRS             SRLPNS      Q +F+QN+ P IPPPKW+++ P  NG++ 
Sbjct: 850  GERPRS-------------SRLPNSRPVTNLQPRFMQNMDPSIPPPKWMTRTPPMNGMHT 896

Query: 782  RHQEAALGGA-YDKPMKVVYQVKTHKPQDMPEHGNQ 678
            RHQEAALG A +DK  K VYQVKT +P D PE+G Q
Sbjct: 897  RHQEAALGPATHDKQTKKVYQVKTRQP-DTPEYGKQ 931


>ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 1029

 Score =  333 bits (853), Expect = 1e-88
 Identities = 178/308 (57%), Positives = 205/308 (66%), Gaps = 2/308 (0%)
 Frame = -1

Query: 1676 APHILLYYQRFSHLPPLERPALPIDTSASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEY 1497
            A HILLYYQ F  L   ER   PI+ +AS GMNG+ W+ ERNVL ++ PSPI GL DIE 
Sbjct: 632  ASHILLYYQVFGRLATHERCVSPINANASGGMNGYLWACERNVLSSIAPSPIDGLPDIES 691

Query: 1496 NQVLNITYLKPRSHKHIPKPPDGVVMPKKILKALDIKPLPMLWHEDNSSRRQQGRERAQV 1317
            NQVLNITYL P  H HIPKPPDGVV+PKKI+K +DIKP P+LWHEDN  R QQGRER+QV
Sbjct: 692  NQVLNITYLNPCRHGHIPKPPDGVVIPKKIIKDIDIKPSPVLWHEDNVGRGQQGRERSQV 751

Query: 1316 PGSIAGSQLGEAAHRLVKNSLRL--NNTSHGLSEQFPGHHTMNRLRSTGASGSGKYYGED 1143
            PG+I GSQLGEAAHRLVKN+L +  NNTSHG+ EQ P  HT NR +S G S  GKY GE+
Sbjct: 752  PGAITGSQLGEAAHRLVKNTLNIKWNNTSHGVLEQPPVRHTTNRFQSAGPSRYGKYSGEN 811

Query: 1142 TSGYYGNYYNHQGIITRPRFPVSSNGGQYDRQNFRMQDRSQHYDQFHNMKTGFYASTIDE 963
            T+ YYG  +NH G +TR R+PVSSN GQ DRQNFR QDR +H +QF N+KTGF       
Sbjct: 812  TNSYYGE-HNHHGAMTRHRYPVSSNAGQVDRQNFRTQDRPRHQEQFQNVKTGF------- 863

Query: 962  GMRPRSSAVPSPKAPAMMLSRLPNSGHTNIPQHQFVQNVGPPIPPPKWISKAPDTNGIYA 783
                               S L N G   I       N GPP+ P KW +KAP  NG+Y 
Sbjct: 864  -------------------SALTNGG--RIETCTIEANSGPPVRPLKWNTKAP-INGVYP 901

Query: 782  RHQEAALG 759
            R QEAA G
Sbjct: 902  RRQEAASG 909


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