BLASTX nr result

ID: Glycyrrhiza24_contig00018829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018829
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539424.1| PREDICTED: uncharacterized protein LOC100790...   211   1e-52
gb|ABM55245.1| transposon-like protein [Beta vulgaris]                195   4e-48
ref|XP_003605924.1| TdcA1-ORF2 protein [Medicago truncatula] gi|...   194   7e-48
gb|ABG37655.1| integrase [Populus trichocarpa]                        186   3e-45
emb|CAE04035.3| OSJNBb0068N06.11 [Oryza sativa Japonica Group]        180   1e-43

>ref|XP_003539424.1| PREDICTED: uncharacterized protein LOC100790056 [Glycine max]
          Length = 963

 Score =  211 bits (536), Expect = 1e-52
 Identities = 101/178 (56%), Positives = 132/178 (74%), Gaps = 6/178 (3%)
 Frame = -2

Query: 579  RDEK--EGPPHMFTGNQVWEYVRDFPKVTEGGCS-RLPGYGVLHNWTKRSIFWDLPYWKD 409
            +DE+  +GPP   T  +VW  V D+PKVT+ G +  +PGYGV HNWTK+S+FWDLPYWKD
Sbjct: 505  KDERVLDGPPPKITSEEVWLRVCDYPKVTDFGQTVPIPGYGVDHNWTKKSVFWDLPYWKD 564

Query: 408  NLLRHNLDVMQIEKYFFDNVFNTIMNVTGKTKDDEKARMDISVLCARGDLELVNLPGGKM 229
            NLLRHNLDVM IEK  FDN+FNT+M+V GKTKD+EKAR D+ + C R DLEL   P GK+
Sbjct: 565  NLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLELYCKRRDLELKPQPNGKL 624

Query: 228  GKPKANYTLTSEDAQLVCKWIRELKMPGDCASNLIRCANVA---NGRMHGMNSHDCHV 64
             KPKA Y+LT+++A+LVCKW+++L+MP   +SNL RCA+     N R + M   + H+
Sbjct: 625  LKPKAIYSLTAQEAKLVCKWLKDLRMPDGYSSNLARCADTKCTWNPRYYDMIRRNFHI 682


>gb|ABM55245.1| transposon-like protein [Beta vulgaris]
          Length = 1399

 Score =  195 bits (496), Expect = 4e-48
 Identities = 90/198 (45%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
 Frame = -2

Query: 591 FIRNRDEKEGPPHMFTGNQVWEYVRDFPKVTEGGCSRLPGYGVLHNWTKRSIFWDLPYWK 412
           F +NR E    PH+ +G ++W+ V+D PK T+G  +          W K++I W+LPYWK
Sbjct: 374 FCKNRVENGVAPHIMSGEELWQCVKDLPKATDGPEALNRLKKDKKGWLKQNILWELPYWK 433

Query: 411 DNLLRHNLDVMQIEKYFFDNVFNTIMNVTGKTKDDEKARMDISVLCARGDLELVNLPGGK 232
           D ++RHNLDVM +EK FFD + NT+M+V G+T D   AR D++ +C R +LELV+   G 
Sbjct: 434 DLIIRHNLDVMHVEKNFFDQLINTVMDVKGQTSDTLSARKDMTRVCKRHELELVDDGVGN 493

Query: 231 MGKPKANYTLTSEDAQLVCKWIRELKMPGDCASNLIRCANVANGRMHGMNSHDCHVFIEC 52
           + KPKA YTL     ++ C+W+R+LK P D ASNL RC ++++ ++ G+ SHDCHVF+E 
Sbjct: 494 LTKPKAPYTLDKAQKKVFCEWVRDLKFPDDFASNLSRCVDLSSSKLQGLKSHDCHVFMER 553

Query: 51  LLPIAFRS-LPQCVWKPL 1
           LLP+  +  LP  VWK +
Sbjct: 554 LLPVGLKELLPLHVWKAI 571


>ref|XP_003605924.1| TdcA1-ORF2 protein [Medicago truncatula]
           gi|355506979|gb|AES88121.1| TdcA1-ORF2 protein [Medicago
           truncatula]
          Length = 1066

 Score =  194 bits (494), Expect = 7e-48
 Identities = 89/155 (57%), Positives = 112/155 (72%)
 Frame = -2

Query: 465 VLHNWTKRSIFWDLPYWKDNLLRHNLDVMQIEKYFFDNVFNTIMNVTGKTKDDEKARMDI 286
           +L +W    IFW+LPYW  NL+RHNLDVM IEK  FDNVFNT+M++ GKTKD+ KARMD+
Sbjct: 66  ILSSWC---IFWELPYWSTNLIRHNLDVMHIEKNVFDNVFNTVMDIKGKTKDNIKARMDL 122

Query: 285 SVLCARGDLELVNLPGGKMGKPKANYTLTSEDAQLVCKWIRELKMPGDCASNLIRCANVA 106
            + C R DLEL+    G+  K KANYT T E  + +C+W++ LKMP   ASNL RC ++ 
Sbjct: 123 KLYCKRKDLELLEQSNGRTIKSKANYTFTLEQKRAICEWVKCLKMPDGYASNLARCVDMK 182

Query: 105 NGRMHGMNSHDCHVFIECLLPIAFRSLPQCVWKPL 1
            G++HGM SHDCHVF+E LLPIAF SLP   WK +
Sbjct: 183 EGKLHGMKSHDCHVFMERLLPIAFSSLPDQTWKAI 217


>gb|ABG37655.1| integrase [Populus trichocarpa]
          Length = 1263

 Score =  186 bits (472), Expect = 3e-45
 Identities = 90/201 (44%), Positives = 132/201 (65%), Gaps = 4/201 (1%)
 Frame = -2

Query: 591 FIRNRDEKEGPPHMFTGNQVWEYVRDFPKVTEG---GCSRLPGYGVLHNWTKRSIFWDLP 421
           F   R EK+      +G ++ + V ++  +  G   G  + PG+G+ HNW KRSI W+LP
Sbjct: 105 FFVGRVEKDVASPRLSGEELHDVVSEYGDIVFGLQSGKQKFPGFGLTHNWVKRSIVWELP 164

Query: 420 YWKDNLLRHNLDVMQIEKYFFDNVFNTIMNVTGKTKDDEKARMDISVLCARGDLELVNLP 241
           YWK NLL HNLDVM IEK  F+N+FNT+M+V GKTKD+ KAR+DI++ C R ++ELV   
Sbjct: 165 YWKTNLLCHNLDVMHIEKNMFENIFNTVMDVKGKTKDNIKARLDIALYCNRKNMELV-YD 223

Query: 240 GGKMGKPKANYTLTSEDAQLVCKWIRELKMPGDCASNLIRCANVANGRMHGMNSHDCHVF 61
             ++ KP+A++ L      L+ KW++ L+     ASN+ R  N+ + R++GM SHDCHVF
Sbjct: 224 ESRVAKPRASFVLEKNAQLLLYKWLKSLRFLDGHASNISRLVNIEDCRLYGMKSHDCHVF 283

Query: 60  IECLLPIAFRS-LPQCVWKPL 1
           ++ L+P+AFR  LP+ +W  L
Sbjct: 284 MQTLIPLAFRDLLPKGIWDAL 304


>emb|CAE04035.3| OSJNBb0068N06.11 [Oryza sativa Japonica Group]
          Length = 1182

 Score =  180 bits (457), Expect = 1e-43
 Identities = 82/182 (45%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
 Frame = -2

Query: 591 FIRNRDEKEGPPHMFTGNQVWEYVRDFPKVTEG---GCSRLPGYGVLHNWTKRSIFWDLP 421
           FI+N+++K+GPP   + ++ ++ V+  P++T G   G   + G+G  HNW KRSIFW+LP
Sbjct: 314 FIQNKEDKDGPPIHRSSSEGYDCVKSLPQITFGTKAGNQEIEGFGKEHNWVKRSIFWELP 373

Query: 420 YWKDNLLRHNLDVMQIEKYFFDNVFNTIMNVTGKTKDDEKARMDISVLCARGDLELVNLP 241
           YW++ L+RHNLDVM IEK  FDN++NT+M++  KTKD+ KA+ D++ +C R +L +    
Sbjct: 374 YWRELLVRHNLDVMHIEKNVFDNIWNTLMDIPKKTKDNVKAQFDLANICNRKELHMQQKS 433

Query: 240 GGKMGKPKANYTLTSEDAQLVCKWIRELKMPGDCASNLIRCANVANGRMHGMNSHDCHVF 61
            G+  KPKA Y+L     +LV +W++ LK P   ASNL +  ++  G++ GM SHDCHVF
Sbjct: 434 IGRWVKPKACYSLDKAQKKLVLQWVKNLKFPDGYASNLAQGVDINRGKIIGMKSHDCHVF 493

Query: 60  IE 55
           +E
Sbjct: 494 ME 495


Top