BLASTX nr result

ID: Glycyrrhiza24_contig00018810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018810
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-li...   170   2e-40
ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|g...   160   2e-37
ref|XP_003618847.1| Chloride channel protein CLC-a [Medicago tru...   151   1e-34
ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [V...   151   1e-34
gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]                 151   1e-34

>ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-like [Glycine max]
          Length = 790

 Score =  170 bits (431), Expect = 2e-40
 Identities = 100/171 (58%), Positives = 105/171 (61%)
 Frame = +2

Query: 2    WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEVAITKEEMEMFVXXXXXXXXXXXXXXXX 181
            WFLK            KFTWVELAEREG IEEVA+T EEMEMF                 
Sbjct: 668  WFLKERRRTEEWEVREKFTWVELAEREGSIEEVAVTSEEMEMF----------------- 710

Query: 182  XXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXX 361
                        VDLHPLTNTTPFTVLESMSVAKA++LFRQVGLRHLLVVPKYQASG   
Sbjct: 711  ------------VDLHPLTNTTPFTVLESMSVAKAMILFRQVGLRHLLVVPKYQASG--- 755

Query: 362  XXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTKGREKRN 514
                               VIGILTRQDLLA+NILTVFPHLA +KGREKRN
Sbjct: 756  ----------------VSPVIGILTRQDLLAHNILTVFPHLAISKGREKRN 790


>ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|gb|AAY43007.1| chloride
            channel [Glycine max]
          Length = 783

 Score =  160 bits (405), Expect = 2e-37
 Identities = 95/165 (57%), Positives = 100/165 (60%)
 Frame = +2

Query: 2    WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEVAITKEEMEMFVXXXXXXXXXXXXXXXX 181
            WFLK            KFTWVELAEREG IE+VA+TKEEMEMF                 
Sbjct: 665  WFLKERRRTEEWEVREKFTWVELAEREGNIEDVAVTKEEMEMF----------------- 707

Query: 182  XXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXX 361
                        VDLHPLTNTTPFTVLESMSVAKA+VLFRQVGLRH+LVVPKYQASG   
Sbjct: 708  ------------VDLHPLTNTTPFTVLESMSVAKAMVLFRQVGLRHMLVVPKYQASG--- 752

Query: 362  XXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTK 496
                               VIGILTRQDLLA NILTVFPHLAK+K
Sbjct: 753  ----------------VSPVIGILTRQDLLAYNILTVFPHLAKSK 781


>ref|XP_003618847.1| Chloride channel protein CLC-a [Medicago truncatula]
            gi|355493862|gb|AES75065.1| Chloride channel protein
            CLC-a [Medicago truncatula]
          Length = 780

 Score =  151 bits (382), Expect = 1e-34
 Identities = 93/172 (54%), Positives = 99/172 (57%), Gaps = 1/172 (0%)
 Frame = +2

Query: 2    WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEV-AITKEEMEMFVXXXXXXXXXXXXXXX 178
            WFLK            KF+WVELAERE  IE+V  +TKEEMEMF                
Sbjct: 657  WFLKEKRRTEEWEVREKFSWVELAEREENIEDVIGVTKEEMEMF---------------- 700

Query: 179  XXXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXX 358
                         VDLHPLTNTTPFTVLESMSVAKA +LFRQVGLRH+LVVPKYQASG  
Sbjct: 701  -------------VDLHPLTNTTPFTVLESMSVAKARILFRQVGLRHMLVVPKYQASG-- 745

Query: 359  XXXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTKGREKRN 514
                                VIGILTRQDLLA NIL VFPHL  +KGREK N
Sbjct: 746  -----------------VSPVIGILTRQDLLAYNILPVFPHLENSKGREKSN 780


>ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [Vitis vinifera]
            gi|296082356|emb|CBI21361.3| unnamed protein product
            [Vitis vinifera]
          Length = 789

 Score =  151 bits (382), Expect = 1e-34
 Identities = 87/171 (50%), Positives = 100/171 (58%)
 Frame = +2

Query: 2    WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEVAITKEEMEMFVXXXXXXXXXXXXXXXX 181
            WFL+            KFTW+ELAEREG  EEVA+T +EMEM+V                
Sbjct: 667  WFLQERRRTEEWEVREKFTWIELAEREGKFEEVAVTNDEMEMYV---------------- 710

Query: 182  XXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXX 361
                         DLHPLTNTTP+TV+ESMSVAKA+VLFRQVGLRH+L+VPKYQA+G   
Sbjct: 711  -------------DLHPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAAG--- 754

Query: 362  XXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTKGREKRN 514
                               V+GILTRQDL A NILT FPHLAK+K REK N
Sbjct: 755  ----------------VSPVVGILTRQDLRAYNILTAFPHLAKSKEREKGN 789


>gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]
          Length = 789

 Score =  151 bits (382), Expect = 1e-34
 Identities = 87/171 (50%), Positives = 100/171 (58%)
 Frame = +2

Query: 2    WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEVAITKEEMEMFVXXXXXXXXXXXXXXXX 181
            WFL+            KFTW+ELAEREG  EEVA+T +EMEM+V                
Sbjct: 667  WFLQERRRTEEWEVREKFTWIELAEREGKFEEVAVTNDEMEMYV---------------- 710

Query: 182  XXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXX 361
                         DLHPLTNTTP+TV+ESMSVAKA+VLFRQVGLRH+L+VPKYQA+G   
Sbjct: 711  -------------DLHPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAAG--- 754

Query: 362  XXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTKGREKRN 514
                               V+GILTRQDL A NILT FPHLAK+K REK N
Sbjct: 755  ----------------VSPVVGILTRQDLRAYNILTAFPHLAKSKEREKGN 789


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