BLASTX nr result
ID: Glycyrrhiza24_contig00018810
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00018810 (672 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-li... 170 2e-40 ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|g... 160 2e-37 ref|XP_003618847.1| Chloride channel protein CLC-a [Medicago tru... 151 1e-34 ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [V... 151 1e-34 gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera] 151 1e-34 >ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-like [Glycine max] Length = 790 Score = 170 bits (431), Expect = 2e-40 Identities = 100/171 (58%), Positives = 105/171 (61%) Frame = +2 Query: 2 WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEVAITKEEMEMFVXXXXXXXXXXXXXXXX 181 WFLK KFTWVELAEREG IEEVA+T EEMEMF Sbjct: 668 WFLKERRRTEEWEVREKFTWVELAEREGSIEEVAVTSEEMEMF----------------- 710 Query: 182 XXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXX 361 VDLHPLTNTTPFTVLESMSVAKA++LFRQVGLRHLLVVPKYQASG Sbjct: 711 ------------VDLHPLTNTTPFTVLESMSVAKAMILFRQVGLRHLLVVPKYQASG--- 755 Query: 362 XXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTKGREKRN 514 VIGILTRQDLLA+NILTVFPHLA +KGREKRN Sbjct: 756 ----------------VSPVIGILTRQDLLAHNILTVFPHLAISKGREKRN 790 >ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|gb|AAY43007.1| chloride channel [Glycine max] Length = 783 Score = 160 bits (405), Expect = 2e-37 Identities = 95/165 (57%), Positives = 100/165 (60%) Frame = +2 Query: 2 WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEVAITKEEMEMFVXXXXXXXXXXXXXXXX 181 WFLK KFTWVELAEREG IE+VA+TKEEMEMF Sbjct: 665 WFLKERRRTEEWEVREKFTWVELAEREGNIEDVAVTKEEMEMF----------------- 707 Query: 182 XXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXX 361 VDLHPLTNTTPFTVLESMSVAKA+VLFRQVGLRH+LVVPKYQASG Sbjct: 708 ------------VDLHPLTNTTPFTVLESMSVAKAMVLFRQVGLRHMLVVPKYQASG--- 752 Query: 362 XXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTK 496 VIGILTRQDLLA NILTVFPHLAK+K Sbjct: 753 ----------------VSPVIGILTRQDLLAYNILTVFPHLAKSK 781 >ref|XP_003618847.1| Chloride channel protein CLC-a [Medicago truncatula] gi|355493862|gb|AES75065.1| Chloride channel protein CLC-a [Medicago truncatula] Length = 780 Score = 151 bits (382), Expect = 1e-34 Identities = 93/172 (54%), Positives = 99/172 (57%), Gaps = 1/172 (0%) Frame = +2 Query: 2 WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEV-AITKEEMEMFVXXXXXXXXXXXXXXX 178 WFLK KF+WVELAERE IE+V +TKEEMEMF Sbjct: 657 WFLKEKRRTEEWEVREKFSWVELAEREENIEDVIGVTKEEMEMF---------------- 700 Query: 179 XXXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXX 358 VDLHPLTNTTPFTVLESMSVAKA +LFRQVGLRH+LVVPKYQASG Sbjct: 701 -------------VDLHPLTNTTPFTVLESMSVAKARILFRQVGLRHMLVVPKYQASG-- 745 Query: 359 XXXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTKGREKRN 514 VIGILTRQDLLA NIL VFPHL +KGREK N Sbjct: 746 -----------------VSPVIGILTRQDLLAYNILPVFPHLENSKGREKSN 780 >ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [Vitis vinifera] gi|296082356|emb|CBI21361.3| unnamed protein product [Vitis vinifera] Length = 789 Score = 151 bits (382), Expect = 1e-34 Identities = 87/171 (50%), Positives = 100/171 (58%) Frame = +2 Query: 2 WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEVAITKEEMEMFVXXXXXXXXXXXXXXXX 181 WFL+ KFTW+ELAEREG EEVA+T +EMEM+V Sbjct: 667 WFLQERRRTEEWEVREKFTWIELAEREGKFEEVAVTNDEMEMYV---------------- 710 Query: 182 XXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXX 361 DLHPLTNTTP+TV+ESMSVAKA+VLFRQVGLRH+L+VPKYQA+G Sbjct: 711 -------------DLHPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAAG--- 754 Query: 362 XXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTKGREKRN 514 V+GILTRQDL A NILT FPHLAK+K REK N Sbjct: 755 ----------------VSPVVGILTRQDLRAYNILTAFPHLAKSKEREKGN 789 >gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera] Length = 789 Score = 151 bits (382), Expect = 1e-34 Identities = 87/171 (50%), Positives = 100/171 (58%) Frame = +2 Query: 2 WFLKXXXXXXXXXXXXKFTWVELAEREGGIEEVAITKEEMEMFVXXXXXXXXXXXXXXXX 181 WFL+ KFTW+ELAEREG EEVA+T +EMEM+V Sbjct: 667 WFLQERRRTEEWEVREKFTWIELAEREGKFEEVAVTNDEMEMYV---------------- 710 Query: 182 XXXXXXXXMEMFVDLHPLTNTTPFTVLESMSVAKALVLFRQVGLRHLLVVPKYQASGXXX 361 DLHPLTNTTP+TV+ESMSVAKA+VLFRQVGLRH+L+VPKYQA+G Sbjct: 711 -------------DLHPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAAG--- 754 Query: 362 XXXXXXXXXXXXXXXXXXXVIGILTRQDLLANNILTVFPHLAKTKGREKRN 514 V+GILTRQDL A NILT FPHLAK+K REK N Sbjct: 755 ----------------VSPVVGILTRQDLRAYNILTAFPHLAKSKEREKGN 789