BLASTX nr result

ID: Glycyrrhiza24_contig00018792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018792
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533464.1| PREDICTED: transcription initiation factor T...   245   1e-62
ref|XP_002273712.2| PREDICTED: transcription initiation factor T...   234   1e-59
emb|CBI21835.3| unnamed protein product [Vitis vinifera]              234   1e-59
ref|XP_002522626.1| transcription initiation factor tfiid, putat...   234   2e-59
ref|XP_002323740.1| histone acetyltransferase [Populus trichocar...   231   2e-58

>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1910

 Score =  245 bits (625), Expect = 1e-62
 Identities = 125/130 (96%), Positives = 127/130 (97%)
 Frame = +3

Query: 3    VKKKAATSRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSS 182
            VKKKAA +RGGSTVTGTDADLRRLSM+AAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSS
Sbjct: 1122 VKKKAAANRGGSTVTGTDADLRRLSMDAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSS 1181

Query: 183  EQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVIGDENESDSE 362
            EQA SGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAV GDENESDSE
Sbjct: 1182 EQATSGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDSE 1241

Query: 363  GNSDLDSFAG 392
            GNSDLDSFAG
Sbjct: 1242 GNSDLDSFAG 1251


>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score =  234 bits (598), Expect = 1e-59
 Identities = 121/130 (93%), Positives = 122/130 (93%)
 Frame = +3

Query: 3    VKKKAATSRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSS 182
            VKKK    RGGSTVTGTDADLRRLSMEAAREVLLKFNVPEE+IAKQTRWHRIAMIRKLSS
Sbjct: 1251 VKKKITVGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEELIAKQTRWHRIAMIRKLSS 1310

Query: 183  EQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVIGDENESDSE 362
            EQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAV  DE ESDSE
Sbjct: 1311 EQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVDSDEIESDSE 1370

Query: 363  GNSDLDSFAG 392
             NSDLDSFAG
Sbjct: 1371 ANSDLDSFAG 1380


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  234 bits (598), Expect = 1e-59
 Identities = 121/130 (93%), Positives = 122/130 (93%)
 Frame = +3

Query: 3    VKKKAATSRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSS 182
            VKKK    RGGSTVTGTDADLRRLSMEAAREVLLKFNVPEE+IAKQTRWHRIAMIRKLSS
Sbjct: 981  VKKKITVGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEELIAKQTRWHRIAMIRKLSS 1040

Query: 183  EQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVIGDENESDSE 362
            EQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAV  DE ESDSE
Sbjct: 1041 EQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVDSDEIESDSE 1100

Query: 363  GNSDLDSFAG 392
             NSDLDSFAG
Sbjct: 1101 ANSDLDSFAG 1110


>ref|XP_002522626.1| transcription initiation factor tfiid, putative [Ricinus communis]
            gi|223538102|gb|EEF39713.1| transcription initiation
            factor tfiid, putative [Ricinus communis]
          Length = 1885

 Score =  234 bits (597), Expect = 2e-59
 Identities = 121/128 (94%), Positives = 122/128 (95%)
 Frame = +3

Query: 9    KKAATSRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQ 188
            KK A +RGGSTVTGTDADLRRLSMEAAREVLLKFNVPEE IAKQTRWHRIAMIRKLSSEQ
Sbjct: 1082 KKKAAARGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEQIAKQTRWHRIAMIRKLSSEQ 1141

Query: 189  AASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVIGDENESDSEGN 368
            AASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAV GDE ESDSE N
Sbjct: 1142 AASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVDGDELESDSEAN 1201

Query: 369  SDLDSFAG 392
            SDLDSFAG
Sbjct: 1202 SDLDSFAG 1209


>ref|XP_002323740.1| histone acetyltransferase [Populus trichocarpa]
            gi|222866742|gb|EEF03873.1| histone acetyltransferase
            [Populus trichocarpa]
          Length = 1857

 Score =  231 bits (589), Expect = 2e-58
 Identities = 118/130 (90%), Positives = 122/130 (93%)
 Frame = +3

Query: 3    VKKKAATSRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSS 182
            +KKKA   RGGSTVTGTDADLRRLSMEAAREVLLKFNVP+E IAKQTRWHRIAMIRKLSS
Sbjct: 1055 MKKKAGAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPDEQIAKQTRWHRIAMIRKLSS 1114

Query: 183  EQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVIGDENESDSE 362
            EQA+ GVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSA+ GDE ESDSE
Sbjct: 1115 EQASCGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSALDGDEIESDSE 1174

Query: 363  GNSDLDSFAG 392
             NSDLDSFAG
Sbjct: 1175 ANSDLDSFAG 1184


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