BLASTX nr result

ID: Glycyrrhiza24_contig00018761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018761
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598265.1| Rab5 GDP/GTP exchange factor [Medicago trunc...   174   9e-42
ref|XP_003523864.1| PREDICTED: vacuolar protein sorting-associat...   162   3e-38
emb|CBI16976.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_002265083.1| PREDICTED: vacuolar protein sorting-associat...   144   1e-32
ref|XP_002329217.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29

>ref|XP_003598265.1| Rab5 GDP/GTP exchange factor [Medicago truncatula]
           gi|355487313|gb|AES68516.1| Rab5 GDP/GTP exchange factor
           [Medicago truncatula]
          Length = 394

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/97 (85%), Positives = 93/97 (95%)
 Frame = +3

Query: 3   STSTSTTYFHDFLHRMRHPASLDLVRAIKSFIVSFSFDQPKPESDGKRVQDFFLSMEVAI 182
           ++S+ +T FHDFLHRMRHP+SLDLVRAIKSFIVSFSF QPKPE+DG+RVQDFFLSMEVAI
Sbjct: 5   ASSSRSTSFHDFLHRMRHPSSLDLVRAIKSFIVSFSFYQPKPENDGRRVQDFFLSMEVAI 64

Query: 183 RDHPLWASATEEDIDCAMEGLEKYILTKLFSRTFATS 293
           R+HPLWA+ATEEDIDCAMEGLEKYI+TKLFSRTFA S
Sbjct: 65  RNHPLWATATEEDIDCAMEGLEKYIMTKLFSRTFAAS 101


>ref|XP_003523864.1| PREDICTED: vacuolar protein sorting-associated protein 9A-like
           [Glycine max]
          Length = 375

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/92 (82%), Positives = 86/92 (93%)
 Frame = +3

Query: 18  TTYFHDFLHRMRHPASLDLVRAIKSFIVSFSFDQPKPESDGKRVQDFFLSMEVAIRDHPL 197
           +T FHDFL+RMRHPASLDLVR+IKSFIVSFSF QPKPE+DGKRVQDFF+SME AIRDH L
Sbjct: 6   STSFHDFLYRMRHPASLDLVRSIKSFIVSFSFHQPKPENDGKRVQDFFVSMEAAIRDHSL 65

Query: 198 WASATEEDIDCAMEGLEKYILTKLFSRTFATS 293
           W +A+EEDIDCAM+GLEKYI+TKLFSRTF+ S
Sbjct: 66  WTTASEEDIDCAMQGLEKYIMTKLFSRTFSAS 97


>emb|CBI16976.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/97 (71%), Positives = 83/97 (85%)
 Frame = +3

Query: 3   STSTSTTYFHDFLHRMRHPASLDLVRAIKSFIVSFSFDQPKPESDGKRVQDFFLSMEVAI 182
           ++S+    F+DFL RMR+PASLDLVR+IKSFIVSFSF  P PE+DGKR+QDF L+ME +I
Sbjct: 3   ASSSQPLTFYDFLDRMRNPASLDLVRSIKSFIVSFSFYAPSPENDGKRLQDFLLTMEDSI 62

Query: 183 RDHPLWASATEEDIDCAMEGLEKYILTKLFSRTFATS 293
           RDHPLW  ATEE+ID A+EGLEKY++TKLFSRTFA S
Sbjct: 63  RDHPLWVGATEEEIDSAIEGLEKYVMTKLFSRTFAAS 99


>ref|XP_002265083.1| PREDICTED: vacuolar protein sorting-associated protein 9A-like
           [Vitis vinifera]
          Length = 382

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/97 (71%), Positives = 83/97 (85%)
 Frame = +3

Query: 3   STSTSTTYFHDFLHRMRHPASLDLVRAIKSFIVSFSFDQPKPESDGKRVQDFFLSMEVAI 182
           ++S+    F+DFL RMR+PASLDLVR+IKSFIVSFSF  P PE+DGKR+QDF L+ME +I
Sbjct: 3   ASSSQPLTFYDFLDRMRNPASLDLVRSIKSFIVSFSFYAPSPENDGKRLQDFLLTMEDSI 62

Query: 183 RDHPLWASATEEDIDCAMEGLEKYILTKLFSRTFATS 293
           RDHPLW  ATEE+ID A+EGLEKY++TKLFSRTFA S
Sbjct: 63  RDHPLWVGATEEEIDSAIEGLEKYVMTKLFSRTFAAS 99


>ref|XP_002329217.1| predicted protein [Populus trichocarpa] gi|222870998|gb|EEF08129.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/88 (68%), Positives = 75/88 (85%)
 Frame = +3

Query: 30  HDFLHRMRHPASLDLVRAIKSFIVSFSFDQPKPESDGKRVQDFFLSMEVAIRDHPLWASA 209
           +DFL +MR+PASL+LV++IKSFIVSF F    PE+D KRVQ+FF +ME AI +HPLWA A
Sbjct: 1   YDFLDKMRNPASLNLVKSIKSFIVSFQFSSANPENDSKRVQEFFSTMEAAIMEHPLWAGA 60

Query: 210 TEEDIDCAMEGLEKYILTKLFSRTFATS 293
           T+++ DC+MEGLEKYI+TKLFSRTFA S
Sbjct: 61  TDDEFDCSMEGLEKYIMTKLFSRTFAIS 88


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