BLASTX nr result

ID: Glycyrrhiza24_contig00018757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018757
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containi...   267   1e-69
ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containi...   258   6e-67
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...   236   2e-60
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]   236   3e-60
ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-57

>ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  267 bits (683), Expect = 1e-69
 Identities = 122/141 (86%), Positives = 132/141 (93%)
 Frame = +2

Query: 2   KKGLRMLPACSWIEVKKQPYSFLCGDKSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLP 181
           KKGLRMLPACSW+EVKKQPY+FLCGDKSH QT+EIYQKVDNL+VEI +HGY  ENE LLP
Sbjct: 551 KKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLP 610

Query: 182 DVDEEEQRIQKYHSEKLAIAFGLINTPDWMPLQMTQGHRVCGNCHNAIKLIAKVTGREIV 361
           DVDEEEQRI KYHSEKLAIAFGLINTP W PLQ+TQGHRVCG+CH+AIKLIA VTGREIV
Sbjct: 611 DVDEEEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIV 670

Query: 362 LRDASRFHHFKNGSCSCGDYW 424
           +RDASRFHHF+NGSCSCGDYW
Sbjct: 671 VRDASRFHHFRNGSCSCGDYW 691


>ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  258 bits (659), Expect = 6e-67
 Identities = 117/141 (82%), Positives = 132/141 (93%)
 Frame = +2

Query: 2   KKGLRMLPACSWIEVKKQPYSFLCGDKSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLP 181
           +KGLRMLPAC+WIEVKKQ Y+FLCGDKSH QT+EIY+KV+N++VEISRHGYV EN+ LLP
Sbjct: 550 RKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLP 609

Query: 182 DVDEEEQRIQKYHSEKLAIAFGLINTPDWMPLQMTQGHRVCGNCHNAIKLIAKVTGREIV 361
           DVDEEEQRI KYHSEKLAIAFGLINTP W PLQ+TQGHRVCG+CH+AIK IA VTGREIV
Sbjct: 610 DVDEEEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIV 669

Query: 362 LRDASRFHHFKNGSCSCGDYW 424
           +RDASRFHHF++GSCSCGDYW
Sbjct: 670 VRDASRFHHFRDGSCSCGDYW 690


>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  236 bits (603), Expect = 2e-60
 Identities = 104/141 (73%), Positives = 126/141 (89%)
 Frame = +2

Query: 2   KKGLRMLPACSWIEVKKQPYSFLCGDKSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLP 181
           ++GLRMLPACSWIE+KKQPY F+ GDK H Q++EIYQK+D L++EIS+HGYV +++ LLP
Sbjct: 564 RRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLP 623

Query: 182 DVDEEEQRIQKYHSEKLAIAFGLINTPDWMPLQMTQGHRVCGNCHNAIKLIAKVTGREIV 361
           DVDE+E+R+  YHSEKLAIAFGLINT DW PLQ+ Q HR+CG+CH+AIKLIA VT REIV
Sbjct: 624 DVDEQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIV 683

Query: 362 LRDASRFHHFKNGSCSCGDYW 424
           +RDASRFHHFK+GSCSCGDYW
Sbjct: 684 VRDASRFHHFKDGSCSCGDYW 704


>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  236 bits (601), Expect = 3e-60
 Identities = 104/141 (73%), Positives = 125/141 (88%)
 Frame = +2

Query: 2   KKGLRMLPACSWIEVKKQPYSFLCGDKSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLP 181
           ++GLRMLPACSWIE+KKQPY F+ GDK H Q++EIYQK+D L++EIS+HGYV + + LLP
Sbjct: 564 RRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLP 623

Query: 182 DVDEEEQRIQKYHSEKLAIAFGLINTPDWMPLQMTQGHRVCGNCHNAIKLIAKVTGREIV 361
           DVDE+E+R+  YHSEKLAIAFGLINT DW PLQ+ Q HR+CG+CH+AIKLIA VT REIV
Sbjct: 624 DVDEQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIV 683

Query: 362 LRDASRFHHFKNGSCSCGDYW 424
           +RDASRFHHFK+GSCSCGDYW
Sbjct: 684 VRDASRFHHFKDGSCSCGDYW 704


>ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|222869246|gb|EEF06377.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  226 bits (577), Expect = 2e-57
 Identities = 100/141 (70%), Positives = 121/141 (85%)
 Frame = +2

Query: 2   KKGLRMLPACSWIEVKKQPYSFLCGDKSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLP 181
           +KGLRM P CSWIEVK++P+ FL GD  HPQ +EIYQKVD L++EIS++GYV   + LLP
Sbjct: 408 RKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLP 467

Query: 182 DVDEEEQRIQKYHSEKLAIAFGLINTPDWMPLQMTQGHRVCGNCHNAIKLIAKVTGREIV 361
           DVDE+E+R++ YHSEKLAIAFGLI+TP W PLQ+ QGHR+CG+CH AIKLIA+VTGREIV
Sbjct: 468 DVDEQEERVRLYHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIV 527

Query: 362 LRDASRFHHFKNGSCSCGDYW 424
           +RDA RFHHFK+G CSC DYW
Sbjct: 528 IRDAGRFHHFKHGHCSCEDYW 548


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