BLASTX nr result

ID: Glycyrrhiza24_contig00018752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018752
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicag...   594   e-167
ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814...   577   e-162
emb|CBI31917.3| unnamed protein product [Vitis vinifera]              463   e-128
ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212...   423   e-116
ref|XP_002304418.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-69

>ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355509778|gb|AES90920.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 452

 Score =  594 bits (1531), Expect = e-167
 Identities = 295/400 (73%), Positives = 310/400 (77%), Gaps = 10/400 (2%)
 Frame = +2

Query: 113  MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGNVXXXXXXXXXXTAXXXXXXXXXX 292
            M  RTNFYKNPSISYN++ SLSSVLQNL AYNIATGN+                      
Sbjct: 1    MSNRTNFYKNPSISYNRNLSLSSVLQNLHAYNIATGNITSDDQPPPAPAPTASLKRRRHP 60

Query: 293  XXXXXXXXXXXXXXXXGPSSMSHRDYIQKRRKEVASSQNHDRVELTEDVLGNPNSAVPLV 472
                             PSSMSH DYI KRRKEV S++N DRVELTEDVLG  NSA+ LV
Sbjct: 61   RPPQSRHNHHKNDVDDDPSSMSHTDYILKRRKEVDSAKNCDRVELTEDVLGKSNSALSLV 120

Query: 473  DYASDENTSSEREETHTLPNSGH-EKQFDGIKSRNEQRFPVSGEPVCLICGRYGEYICNE 649
            DYASDE+ SSE EET TLPNSGH E+  +G+KSRNEQRFPVSGEPVCLICGRYGEYICNE
Sbjct: 121  DYASDESDSSECEETRTLPNSGHKEESINGVKSRNEQRFPVSGEPVCLICGRYGEYICNE 180

Query: 650  TDDDVCSMXXXXXXXXXXXXXXGSSH--------DQVKDISSSGISDALAVPFFSDDTWD 805
            TDDDVCSM              G+SH        DQ KD SSSGI DAL  P FSDDTWD
Sbjct: 181  TDDDVCSMECKNELLEVLKLNEGTSHNQAEDFSHDQAKDFSSSGIRDALPAPVFSDDTWD 240

Query: 806  YNRHRWSKKRSSLSTYECWKCQRPGHLAEDCLVNSCSQITVG-SNRSSSIPKDLLGLYRR 982
            YNRHRWSK RSSLSTYECWKCQRPGHLAEDCLV SCS+ITVG SNRSSSIPKDLLGLYRR
Sbjct: 241  YNRHRWSKTRSSLSTYECWKCQRPGHLAEDCLVKSCSEITVGRSNRSSSIPKDLLGLYRR 300

Query: 983  CHQIGKDLLAANCNACHSSSNLATCIDCSIVLCDGAGHLNDHIRTHPSHQKYYSHKLKRL 1162
            CHQ+GKDLLAANCN C SS NLATCIDCSIVLCDGAGHL+DHIRTHPSHQKYYSHKLKRL
Sbjct: 301  CHQLGKDLLAANCNTCRSSLNLATCIDCSIVLCDGAGHLDDHIRTHPSHQKYYSHKLKRL 360

Query: 1163 VKCCKSTCKVTDIKDLLICHYCFDKAFEKFYDMYTATWKG 1282
            VKCCKSTCKVTDIKDLL+CHYCFDKAFEKFYDMYTATWKG
Sbjct: 361  VKCCKSTCKVTDIKDLLVCHYCFDKAFEKFYDMYTATWKG 400


>ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814892 [Glycine max]
          Length = 446

 Score =  577 bits (1488), Expect = e-162
 Identities = 289/400 (72%), Positives = 306/400 (76%), Gaps = 10/400 (2%)
 Frame = +2

Query: 113  MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGNVXXXXXXXXXXTAXXXXXXXXXX 292
            MGTRTNFYKNPSISY K  S+SSVLQNL AYNIA GNV          TA          
Sbjct: 1    MGTRTNFYKNPSISYKKRLSISSVLQNLHAYNIAAGNVPPADPPQATSTANVPPGNPPHL 60

Query: 293  XXXXXXXXXXXXXXXX--------GPSSMSHRDYIQKRRKEVASSQNHDRVELTEDVLGN 448
                                     PSSMSH DYIQ RRKEV SS+NHDRVELTE+VLGN
Sbjct: 61   TPSARLKRSRNPEPPEFLREYRDDAPSSMSHHDYIQNRRKEVVSSRNHDRVELTEEVLGN 120

Query: 449  PNSAVPLVDY-ASDENTSSEREETHTLPNSGHEKQFDGIK-SRNEQRFPVSGEPVCLICG 622
             NS +PLVDY ASDE+T SE EETHTL NSG +++FDG+K SRNEQRFPVSGEPVCLICG
Sbjct: 121  SNSTLPLVDYDASDEDTPSECEETHTLLNSGQQEEFDGVKKSRNEQRFPVSGEPVCLICG 180

Query: 623  RYGEYICNETDDDVCSMXXXXXXXXXXXXXXGSSHDQVKDISSSGISDALAVPFFSDDTW 802
            RYGEYICNETDDDVCSM              GSSH+QV+DISSSGIS A+ VP F DDTW
Sbjct: 181  RYGEYICNETDDDVCSMECKSELLEILKLNEGSSHNQVRDISSSGISAAVPVPVFGDDTW 240

Query: 803  DYNRHRWSKKRSSLSTYECWKCQRPGHLAEDCLVNSCSQITVGSNRSSSIPKDLLGLYRR 982
            DYN+H WSKK  SLSTYECWKCQRPGHLAEDC+V      T GSNRSSSIPKDLL LYRR
Sbjct: 241  DYNQHHWSKKTCSLSTYECWKCQRPGHLAEDCMV------TDGSNRSSSIPKDLLQLYRR 294

Query: 983  CHQIGKDLLAANCNACHSSSNLATCIDCSIVLCDGAGHLNDHIRTHPSHQKYYSHKLKRL 1162
            CHQIGKDLLAANCN C  SSNLATC+DCSIVLCDGAGHL +HIRTHPSHQKYYSHKLKRL
Sbjct: 295  CHQIGKDLLAANCNVCRRSSNLATCLDCSIVLCDGAGHLIEHIRTHPSHQKYYSHKLKRL 354

Query: 1163 VKCCKSTCKVTDIKDLLICHYCFDKAFEKFYDMYTATWKG 1282
            VKCCKSTCKVTDIKDLL+CHYCFDKAFEKFYDMYTATWKG
Sbjct: 355  VKCCKSTCKVTDIKDLLVCHYCFDKAFEKFYDMYTATWKG 394


>emb|CBI31917.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  463 bits (1192), Expect = e-128
 Identities = 231/402 (57%), Positives = 275/402 (68%), Gaps = 12/402 (2%)
 Frame = +2

Query: 113  MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGNVXXXXXXXXXXTAXXXXXXXXXX 292
            MGTRTNFYKNPS SYN+ FSLSSVLQNL+AYNIATG+                       
Sbjct: 1    MGTRTNFYKNPSFSYNRDFSLSSVLQNLKAYNIATGSASPTDESPPANEKKVNRKRRPDR 60

Query: 293  XXXXXXXXXXXXXXXXGPSSMSHRDYIQKRRKEVASSQNHDRVELTEDVLGNPNSAVPLV 472
                            GP  MSH+D+I+KRRKEV+S Q +   ELT D+LG  NS + LV
Sbjct: 61   RSPPCQNPELKETD--GP--MSHQDFIKKRRKEVSSGQVYQ--ELTPDILGTSNSGLHLV 114

Query: 473  DYASDENTSSEREETHTLPNSGHEKQFDGIKSRNEQRFPVSGEPVCLICGRYGEYICNET 652
            +Y SD++TSSE       PN GH  + + +KSR EQRFP+ GEPVC++CG YGEYICNET
Sbjct: 115  EYESDKSTSSESGAEQDPPNPGHINEVEQVKSRREQRFPLPGEPVCVVCGLYGEYICNET 174

Query: 653  DDDVCSMXXXXXXXXXXXXXXGS-SHDQVKDISSSGISDALAVPFFSDDTWDYNRHRWSK 829
            DDDVCSM               S S++    +SSSG+  AL VP   +DTWDY  HRWSK
Sbjct: 175  DDDVCSMDCKAELLKNLRLSEESLSNEGCPTVSSSGLKCALPVPELGEDTWDYVHHRWSK 234

Query: 830  KRSSLSTYECWKCQRPGHLAEDCLV-----------NSCSQITVGSNRSSSIPKDLLGLY 976
            KRSSL TYECWKCQRPGHLA+DCLV            +C+++ +G N+S+ I +DLLGLY
Sbjct: 235  KRSSLCTYECWKCQRPGHLADDCLVMTSNSQSPCLSQTCNKVPMGQNKSTFISRDLLGLY 294

Query: 977  RRCHQIGKDLLAANCNACHSSSNLATCIDCSIVLCDGAGHLNDHIRTHPSHQKYYSHKLK 1156
            +RCHQIGK+L  A CN C SSS LATC+DCS V+CD AGHL +HI  HPSHQK +S+KLK
Sbjct: 295  KRCHQIGKNLTTAKCNLCCSSSTLATCLDCSTVICDNAGHLKEHIIAHPSHQKIFSYKLK 354

Query: 1157 RLVKCCKSTCKVTDIKDLLICHYCFDKAFEKFYDMYTATWKG 1282
            RLVKCCKSTC+VTD+KDLL+CHYC DKAF+KFYDMYTATWKG
Sbjct: 355  RLVKCCKSTCEVTDLKDLLVCHYCLDKAFDKFYDMYTATWKG 396


>ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212105 [Cucumis sativus]
            gi|449513293|ref|XP_004164287.1| PREDICTED:
            uncharacterized protein LOC101227135 [Cucumis sativus]
          Length = 443

 Score =  423 bits (1087), Expect = e-116
 Identities = 207/391 (52%), Positives = 257/391 (65%), Gaps = 3/391 (0%)
 Frame = +2

Query: 113  MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGNVXXXXXXXXXXTAXXXXXXXXXX 292
            MG+RTNFYKNPSISY K   LSS LQNL+AYNIATGN                       
Sbjct: 1    MGSRTNFYKNPSISYKKDLHLSSALQNLRAYNIATGNAPPTDVQVQSPPVPVVKKNENRK 60

Query: 293  XXXXXXXXXXXXXXXXGPSS-MSHRDYIQKRRKEVASSQNHDRVELTEDVLGNPNSAVPL 469
                                 MSH+DYI++RRKE   SQ ++   LTEDVL   +S + L
Sbjct: 61   RQREPELCGTQMYDVGNSDGPMSHQDYIERRRKEANKSQPYET--LTEDVLVASSSGLNL 118

Query: 470  VDYASDENTSSEREETHTLPNSGHEKQFDGIKSRNEQRFPVSGEPVCLICGRYGEYICNE 649
            VDY SDE+ SS+  E   + NS     +  ++S+ EQRF V+GEPVC++CGRYGEYIC+E
Sbjct: 119  VDYESDESVSSDGAEKPDVQNSSLLNDYKEVESKTEQRFAVAGEPVCVVCGRYGEYICDE 178

Query: 650  TDDDVCSMXXXXXXXXXXXXXXGSSHDQVKDISSSGISDALAVPFFSDDTWDYNRHRWSK 829
            T+DD+CSM                 + +VKD++       L  P F +DTWDY  HRWSK
Sbjct: 179  TNDDICSMECKFKLLEILKRGEEFPNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSK 238

Query: 830  KRSSLSTYECWKCQRPGHLAEDCLVNSCSQITVGSNRSSS--IPKDLLGLYRRCHQIGKD 1003
            K+S+L TYECWKCQ+PGHLAEDCLV + +Q+ +   + +S  +P DLLGLY+RC+Q+GK+
Sbjct: 239  KKSNLCTYECWKCQKPGHLAEDCLVKTSNQVRIAMQQMTSNPVPGDLLGLYKRCYQMGKN 298

Query: 1004 LLAANCNACHSSSNLATCIDCSIVLCDGAGHLNDHIRTHPSHQKYYSHKLKRLVKCCKST 1183
            L  A CN C  S +LATC+DC+ V CD AGHLN+HI THP+H  YYSHKLKRLVKCCKST
Sbjct: 299  LSNALCNECSCSYSLATCLDCNTVYCDSAGHLNEHIHTHPTHGLYYSHKLKRLVKCCKST 358

Query: 1184 CKVTDIKDLLICHYCFDKAFEKFYDMYTATW 1276
            C+VT IKDLL+CHYCFDKAF+KFYDMYTA+W
Sbjct: 359  CRVTQIKDLLVCHYCFDKAFDKFYDMYTASW 389


>ref|XP_002304418.1| predicted protein [Populus trichocarpa] gi|222841850|gb|EEE79397.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  268 bits (685), Expect = 2e-69
 Identities = 143/310 (46%), Positives = 182/310 (58%), Gaps = 6/310 (1%)
 Frame = +2

Query: 113  MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNIATGNVXXXXXXXXXXTAXXXXXXXXXX 292
            MGTRTNFYK PS+SY K  +LSS LQNL+AYNIATGN                       
Sbjct: 1    MGTRTNFYKTPSLSYKKDLNLSSALQNLKAYNIATGNAPLTTEEEDEQQPR--------- 51

Query: 293  XXXXXXXXXXXXXXXXGPSSMSHRDYIQKRRKEVASSQNHDRVELTEDVLGNPNSAVPLV 472
                            G S ++ R   Q+ +K    +++   +E  ++ + +       +
Sbjct: 52   ----------------GDSKIA-RPKRQRIQKNPQHNKHGHAIEENDEPMSH-------L 87

Query: 473  DYASDENTSSERE------ETHTLPNSGHEKQFDGIKSRNEQRFPVSGEPVCLICGRYGE 634
            DY SD + S E+E      +  TL +S H  + D +KSR+EQR+PV GEPVCL+CG+YGE
Sbjct: 88   DYISDSSESEEKEGSSGSRQDDTL-HSDHPNEVDRVKSRSEQRYPVPGEPVCLLCGKYGE 146

Query: 635  YICNETDDDVCSMXXXXXXXXXXXXXXGSSHDQVKDISSSGISDALAVPFFSDDTWDYNR 814
            YICNETDDD+CS+              G + +Q  D+SSSG   AL +P   +DTWDYNR
Sbjct: 147  YICNETDDDICSLECKAELLQSLKLAKGPASNQQLDVSSSGFKCALPMPLLGEDTWDYNR 206

Query: 815  HRWSKKRSSLSTYECWKCQRPGHLAEDCLVNSCSQITVGSNRSSSIPKDLLGLYRRCHQI 994
            HRWSKK S+L  YECWKCQRPGHL EDCLV + +Q+ VG+  S SI +DLLGLY RCHQI
Sbjct: 207  HRWSKKISNLCAYECWKCQRPGHLPEDCLVTTSNQVAVGNKNSDSISRDLLGLYGRCHQI 266

Query: 995  GKDLLAANCN 1024
            GK L  ANCN
Sbjct: 267  GKKLSGANCN 276


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