BLASTX nr result

ID: Glycyrrhiza24_contig00018711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018711
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   119   2e-25
ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...   117   1e-24
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...    64   1e-08
ref|XP_003616131.1| Regulator of nonsense transcripts-like prote...    62   6e-08

>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 950

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/88 (62%), Positives = 68/88 (77%)
 Frame = -2

Query: 265 LEDFAKERCSKVEPAYISYQKRCKSHDPMTLEQFVMKKYDYIVEQYEMYIDDKKLGADIT 86
           LE+FA    + V+ AY SY K C+   PMTLE+FV KKYDYI+EQY+MY DDKKL   ++
Sbjct: 463 LEEFANGNYNHVKNAYFSYTKHCEHDCPMTLEEFVKKKYDYIIEQYDMYKDDKKLSIGMS 522

Query: 85  MEQFLRQRFCLFGGKLKVYLRTLWTHLP 2
           MEQFLRQRFC  GGKLK++++TL THLP
Sbjct: 523 MEQFLRQRFCFIGGKLKLFMKTLCTHLP 550


>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 978

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/88 (61%), Positives = 69/88 (78%)
 Frame = -2

Query: 265 LEDFAKERCSKVEPAYISYQKRCKSHDPMTLEQFVMKKYDYIVEQYEMYIDDKKLGADIT 86
           LE+FA    S V+PAY+SY+KRCK H  +TLE+FV KKY YIVEQY++Y DDKK+   ++
Sbjct: 400 LEEFAVGNYSHVKPAYLSYKKRCKYHCLLTLEEFVKKKYGYIVEQYDIYQDDKKVSVGMS 459

Query: 85  MEQFLRQRFCLFGGKLKVYLRTLWTHLP 2
           MEQF +Q+FC FGGKLK  ++TL THLP
Sbjct: 460 MEQFFKQKFCCFGGKLKSLMKTLCTHLP 487


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/88 (42%), Positives = 53/88 (60%)
 Frame = -2

Query: 265 LEDFAKERCSKVEPAYISYQKRCKSHDPMTLEQFVMKKYDYIVEQYEMYIDDKKLGADIT 86
           LE F   +  +VE AY SY++  K+ DP+TL QFV K       +Y  Y +DKK  + +T
Sbjct: 416 LEQFTMLKHEEVELAYSSYKQHEKNDDPLTLAQFVKK-------EYHSYKEDKK-NSIMT 467

Query: 85  MEQFLRQRFCLFGGKLKVYLRTLWTHLP 2
            EQF++ RF     +LK+  +TL+THLP
Sbjct: 468 FEQFVKMRFSSIVAELKLCKKTLYTHLP 495


>ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago
           truncatula] gi|355517466|gb|AES99089.1| Regulator of
           nonsense transcripts-like protein [Medicago truncatula]
          Length = 950

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/88 (39%), Positives = 53/88 (60%)
 Frame = -2

Query: 265 LEDFAKERCSKVEPAYISYQKRCKSHDPMTLEQFVMKKYDYIVEQYEMYIDDKKLGADIT 86
           LE+F  E+   V  AY +Y++  +  D MTLE++V K +  I E+Y     D K+   +T
Sbjct: 409 LEEFVNEKHCHVISAYRAYKRISRIDDTMTLEEYVQKLWKEIAEEYRSDEID-KVENFMT 467

Query: 85  MEQFLRQRFCLFGGKLKVYLRTLWTHLP 2
            EQF+++RF     KLK  ++TL+THLP
Sbjct: 468 FEQFVKKRFRELSEKLKFLIQTLYTHLP 495


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