BLASTX nr result

ID: Glycyrrhiza24_contig00018705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018705
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   166   2e-53
ref|XP_003606229.1| FAR1-related protein [Medicago truncatula] g...   151   5e-35
ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-l...   114   1e-32
ref|NP_001068457.2| Os11g0681400 [Oryza sativa Japonica Group] g...   112   2e-26
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo...   112   5e-24

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score =  166 bits (419), Expect(2) = 2e-53
 Identities = 75/109 (68%), Positives = 96/109 (88%)
 Frame = +3

Query: 180 YFTLACSRARNYVSSSQHLLKPNPTTRTQCKARLNACMSLDGTITVSRVVLEHNHELSPT 359
           YFTL C+RAR+YVS+S++LLKPNPT R QC AR+N  MSLDG IT+++V LEHNH LSPT
Sbjct: 393 YFTLGCTRARSYVSNSKNLLKPNPTIRAQCMARVNMSMSLDGKITITKVALEHNHGLSPT 452

Query: 360 KARYFRCHRNLGSHIKRRLELSDQDGINMSRNFRSLVVEASGYEHLSFG 506
           K+RYFRC++NL  H KRRL+++DQ GIN+SRNFRS+VVEA+GY++L+FG
Sbjct: 453 KSRYFRCNKNLDPHTKRRLDINDQAGINVSRNFRSMVVEANGYDNLTFG 501



 Score = 68.9 bits (167), Expect(2) = 2e-53
 Identities = 33/61 (54%), Positives = 44/61 (72%)
 Frame = +2

Query: 2   KKSDAGLQTNLDCEDEEEPKVGMVFNSEGEVTRYYMNYARNMGFGINKISSKNGDDGKKV 181
           + SD  L+ N+  + +EEP++GM F+SE EV +YY +YAR MGFG  KI+SKN  DGKK 
Sbjct: 335 ENSDENLEANI-VQADEEPRIGMTFSSEEEVIKYYKSYARCMGFGTVKINSKNAKDGKKY 393

Query: 182 F 184
           F
Sbjct: 394 F 394


>ref|XP_003606229.1| FAR1-related protein [Medicago truncatula]
           gi|355507284|gb|AES88426.1| FAR1-related protein
           [Medicago truncatula]
          Length = 446

 Score =  151 bits (382), Expect = 5e-35
 Identities = 68/109 (62%), Positives = 91/109 (83%)
 Frame = +3

Query: 180 YFTLACSRARNYVSSSQHLLKPNPTTRTQCKARLNACMSLDGTITVSRVVLEHNHELSPT 359
           YFTL C+ AR+YVS++++LLKPNP  R QC AR+N C SLD  I +++V LEH+HELSPT
Sbjct: 39  YFTLGCTCARSYVSNTKNLLKPNPIIRAQCMARVNMCQSLDEKIAITKVALEHSHELSPT 98

Query: 360 KARYFRCHRNLGSHIKRRLELSDQDGINMSRNFRSLVVEASGYEHLSFG 506
           K+ YFRC++NL  H KRRL+++DQ GIN+SRNFR +VVEA+GY++L+FG
Sbjct: 99  KSIYFRCNKNLDPHTKRRLDINDQAGINVSRNFRYMVVEANGYDNLTFG 147



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = +2

Query: 68  MVFNSEGEVTRYYMNYARNMGFGINKISSKNGDDGKKVFYSSM*SCKK 211
           M FN E EVTRYY +YAR MGFG  KI+SKN  DGKK +++   +C +
Sbjct: 1   MTFNYEEEVTRYYKSYARCMGFGTVKINSKNAKDGKKKYFTLGCTCAR 48


>ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-like [Brachypodium
           distachyon]
          Length = 561

 Score =  114 bits (284), Expect(2) = 1e-32
 Identities = 54/109 (49%), Positives = 76/109 (69%)
 Frame = +3

Query: 180 YFTLACSRARNYVSSSQHLLKPNPTTRTQCKARLNACMSLDGTITVSRVVLEHNHELSPT 359
           Y TL CS      S+S+++LKPNPT    CKA++N     DGT  +S V+ +HNH LSP 
Sbjct: 91  YLTLCCSCHGKTESNSKNMLKPNPTAGLGCKAKVNIVRGPDGTFHLSTVISDHNHTLSPH 150

Query: 360 KARYFRCHRNLGSHIKRRLELSDQDGINMSRNFRSLVVEASGYEHLSFG 506
            +R FRC++ L  ++KRRLEL+D+ GI +++NF SLVV A G+E+L+FG
Sbjct: 151 TSRLFRCNKRLNFNVKRRLELNDRAGIRVNKNFNSLVVAADGHENLTFG 199



 Score = 51.2 bits (121), Expect(2) = 1e-32
 Identities = 21/52 (40%), Positives = 35/52 (67%)
 Frame = +2

Query: 50  EEPKVGMVFNSEGEVTRYYMNYARNMGFGINKISSKNGDDGKKVFYSSM*SC 205
           E+P++GM F++E +V +YY NYA+  GFG+ + SS   D+G+  + +   SC
Sbjct: 47  EDPELGMTFDTENDVRQYYKNYAKAKGFGVTRRSSNRDDNGQLKYLTLCCSC 98


>ref|NP_001068457.2| Os11g0681400 [Oryza sativa Japonica Group]
           gi|255680367|dbj|BAF28820.2| Os11g0681400 [Oryza sativa
           Japonica Group]
          Length = 715

 Score =  112 bits (281), Expect(2) = 2e-26
 Identities = 55/109 (50%), Positives = 75/109 (68%)
 Frame = +3

Query: 180 YFTLACSRARNYVSSSQHLLKPNPTTRTQCKARLNACMSLDGTITVSRVVLEHNHELSPT 359
           YFTLACSR      +S +  KPNP+TR QC A++N  +  D    +S + L+HNH +SP+
Sbjct: 81  YFTLACSRQGKAQYTSTNKFKPNPSTRQQCPAKVNFYLH-DEKFCISTLTLDHNHVVSPS 139

Query: 360 KARYFRCHRNLGSHIKRRLELSDQDGINMSRNFRSLVVEASGYEHLSFG 506
           KAR+ RCH+ L    KRRLEL+DQ  I +++NF SLV++A GYE+L FG
Sbjct: 140 KARHLRCHKKLDLQAKRRLELNDQARIRINKNFSSLVMQAGGYENLQFG 188



 Score = 31.6 bits (70), Expect(2) = 2e-26
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 101 YYMNYARNMGFGINKISSKNGDDGKKVFYS 190
           + ++YAR +GFG+ K  SK  +DGK  +++
Sbjct: 54  FTLSYARKLGFGVIKRGSKKTEDGKVRYFT 83


>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
          Length = 965

 Score =  112 bits (281), Expect(2) = 5e-24
 Identities = 55/109 (50%), Positives = 75/109 (68%)
 Frame = +3

Query: 180 YFTLACSRARNYVSSSQHLLKPNPTTRTQCKARLNACMSLDGTITVSRVVLEHNHELSPT 359
           YFTLACSR      +S +  KPNP+TR QC A++N  +  D    +S + L+HNH +SP+
Sbjct: 65  YFTLACSRQGKAQYTSTNKFKPNPSTRQQCPAKVNFYLH-DEKFCISTLTLDHNHVVSPS 123

Query: 360 KARYFRCHRNLGSHIKRRLELSDQDGINMSRNFRSLVVEASGYEHLSFG 506
           KAR+ RCH+ L    KRRLEL+DQ  I +++NF SLV++A GYE+L FG
Sbjct: 124 KARHLRCHKKLDLQAKRRLELNDQARIRINKNFSSLVMQAGGYENLQFG 172



 Score = 23.1 bits (48), Expect(2) = 5e-24
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 128 GFGINKISSKNGDDGKKVFYS 190
           GFG+ K  SK  +DGK  +++
Sbjct: 47  GFGVIKRGSKKTEDGKVRYFT 67


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