BLASTX nr result

ID: Glycyrrhiza24_contig00018664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018664
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   249   9e-64
ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   234   2e-59
ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   197   4e-48
ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   192   1e-46
ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   152   1e-34

>ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 211

 Score =  249 bits (636), Expect = 9e-64
 Identities = 135/214 (63%), Positives = 144/214 (67%), Gaps = 3/214 (1%)
 Frame = +2

Query: 233 SPPPHLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASS---SXXXXXXXXXX 403
           SPPPHLYPQELQ+KLYQA                      KRRASS   S          
Sbjct: 9   SPPPHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSHLLPRTIAN 68

Query: 404 XXXXYRYHSSPCRLDLTVQFLDNLPRILFDEDLQARDPLCCVCLGEFEVKEEVLQIPYCK 583
                 YHSSPCRLDLT+QFLD LPRILFDEDL ARD LCCVCLGEFE+KEEVLQIPYCK
Sbjct: 69  PPTTTPYHSSPCRLDLTLQFLDKLPRILFDEDLLARDSLCCVCLGEFELKEEVLQIPYCK 128

Query: 584 HVFHIDCIHHWLQSNTTCPLCRCSIIPTTKFLNXXXXXXXXXXINNVIITSDPPQQGAII 763
           HVFH +CIHHWLQSN+TCPLCRCSIIPTTKFLN          IN  II+SDPPQ GAII
Sbjct: 129 HVFHFECIHHWLQSNSTCPLCRCSIIPTTKFLN------PAPPIN--IISSDPPQHGAII 180

Query: 764 SESPLQIPISLPPHGEEDIEAVSASSDTANLSRE 865
           S+SPLQ+P     H E   E V ASS+ ANLSRE
Sbjct: 181 SDSPLQLPPQPQDHQE---EVVGASSNAANLSRE 211


>ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 214

 Score =  234 bits (598), Expect = 2e-59
 Identities = 127/215 (59%), Positives = 144/215 (66%), Gaps = 4/215 (1%)
 Frame = +2

Query: 233 SPPPHLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASS---SXXXXXXXXXX 403
           SPPPHLYPQELQ+KLYQ                       KRRASS   +          
Sbjct: 9   SPPPHLYPQELQLKLYQTFIFSIPILFSIILFLLFYLFYLKRRASSLSSTPHLLPRTIAN 68

Query: 404 XXXXYRYHSSPCRLDLTVQFLDNLPRILFDEDLQARDPLCCVCLGEFEVKEEVLQIPYCK 583
                 +   PCRLDLT+ FLD LPRILFDEDL ARD LCCVCLGEFE+KEE++QIPYCK
Sbjct: 69  PPTTSSHIPQPCRLDLTLHFLDKLPRILFDEDLLARDSLCCVCLGEFELKEELVQIPYCK 128

Query: 584 HVFHIDCIHHWLQSNTTCPLCRCSIIPTTKFLNXXXXXXXXXXINNVIITSDPPQQ-GAI 760
           HVFH++CIHHWLQSN+TCPLCRCSIIPTTKFLN          IN  II++DPPQQ GAI
Sbjct: 129 HVFHLECIHHWLQSNSTCPLCRCSIIPTTKFLN------PAPPIN--IISTDPPQQHGAI 180

Query: 761 ISESPLQIPISLPPHGEEDIEAVSASSDTANLSRE 865
           IS+ PLQI +SLPP  ++  E V ASS+ ANLSRE
Sbjct: 181 ISDFPLQI-LSLPPQSQDHQEVVGASSNAANLSRE 214


>ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 209

 Score =  197 bits (501), Expect = 4e-48
 Identities = 115/223 (51%), Positives = 129/223 (57%), Gaps = 6/223 (2%)
 Frame = +2

Query: 197 GVPQXXXXXXXXSPPP--HLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASS 370
           GVPQ         PPP  HLYPQE+Q+KLYQA                      KRRASS
Sbjct: 2   GVPQP--------PPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASS 53

Query: 371 ----SXXXXXXXXXXXXXXYRYHSSPCRLDLTVQFLDNLPRILFDEDLQARDPLCCVCLG 538
                              Y Y + PCRLDLTVQFLD LPRILFDEDL+ RD +CCVCLG
Sbjct: 54  LSSPPLHILPSTSTDPQTAYPYSTQPCRLDLTVQFLDKLPRILFDEDLRTRDSVCCVCLG 113

Query: 539 EFEVKEEVLQIPYCKHVFHIDCIHHWLQSNTTCPLCRCSIIPTTKFLNXXXXXXXXXXIN 718
           EFE+ EE+LQIPYC HVFHI CI +WLQSN+TCPLCRCSIIP++KFLN            
Sbjct: 114 EFELNEELLQIPYCNHVFHISCICNWLQSNSTCPLCRCSIIPSSKFLNPAPP-------- 165

Query: 719 NVIITSDPPQQGAIISESPLQIPISLPPHGEEDIEAVSASSDT 847
             II SDPPQQG I   S     I   PH +E  E V AS++T
Sbjct: 166 --IIISDPPQQGGISGSSS---HIMSLPHQQE--EEVGASTNT 201


>ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 206

 Score =  192 bits (488), Expect = 1e-46
 Identities = 108/215 (50%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
 Frame = +2

Query: 197 GVPQXXXXXXXXSPPP--HLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASS 370
           GVPQ         PPP  HLYPQE+Q+KLYQA                      KRRASS
Sbjct: 2   GVPQP--------PPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASS 53

Query: 371 ---SXXXXXXXXXXXXXXYRYHSSPCRLDLTVQFLDNLPRILFDEDLQARDPLCCVCLGE 541
                             Y Y S PCRLDL VQFLD LPRILFDEDL+  D +CCVCLGE
Sbjct: 54  LSSPPLHILPSTTNSQTTYPYPSQPCRLDLAVQFLDKLPRILFDEDLRTGDSVCCVCLGE 113

Query: 542 FEVKEEVLQIPYCKHVFHIDCIHHWLQSNTTCPLCRCSIIPTTKFLNXXXXXXXXXXINN 721
           FE+KEE+LQIPYCKHVFHI CI +WLQSN+TCPLCRCSIIP+TKFLN             
Sbjct: 114 FELKEELLQIPYCKHVFHISCISNWLQSNSTCPLCRCSIIPSTKFLNPAPP--------- 164

Query: 722 VIITSDPPQQGAIISESPLQIPISLPPHGEEDIEA 826
             I SDP +QG +   S   + +   PH +E++ A
Sbjct: 165 --IISDPTRQGGVSGSSSHILSL---PHQQEEVGA 194


>ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Cucumis sativus]
           gi|449532338|ref|XP_004173139.1| PREDICTED: RING-H2 zinc
           finger protein RHA4a-like [Cucumis sativus]
          Length = 196

 Score =  152 bits (384), Expect = 1e-34
 Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 7/152 (4%)
 Frame = +2

Query: 239 PPHLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASS------SXXXXXXXXX 400
           PPHLYPQ LQ+KLYQA                      KRRASS      S         
Sbjct: 9   PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSSPPILPTS 68

Query: 401 XXXXXYRYHSSPCRLDLTVQ-FLDNLPRILFDEDLQARDPLCCVCLGEFEVKEEVLQIPY 577
                  Y ++ C++DL     +D LP+I F+E+L+ RD LCCVCLGEFE+KEE+LQ+P 
Sbjct: 69  SNNTLTLYVTTACQVDLKADNLIDKLPKIQFNEELKIRDSLCCVCLGEFEIKEELLQVPS 128

Query: 578 CKHVFHIDCIHHWLQSNTTCPLCRCSIIPTTK 673
           CKHVFHIDC++HWL SN+TCPLCRCS+IPTT+
Sbjct: 129 CKHVFHIDCMNHWLISNSTCPLCRCSVIPTTQ 160


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