BLASTX nr result

ID: Glycyrrhiza24_contig00018663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018663
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein A...    79   9e-13
ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812...    79   9e-13
ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811...    79   9e-13
gb|ABD33209.1| Ribonuclease H [Medicago truncatula]                    75   1e-11
dbj|BAE71259.1| hypothetical protein [Trifolium pratense]              64   5e-11

>ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 192

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +2

Query: 269 WACPDPGWSKLNCDGAVAEFGGKAGCGGVLRSDMGTFIMGFAASLNPC-SVTEAELWAIL 445
           W  P  G+ KLNCDGA   +G K   GGVLR   G FI+GF+ +L  C S  EAELWAI 
Sbjct: 30  WTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIK 89

Query: 446 ISLKLAKETGHIKIQVETDSLAALRLI 526
           I ++     G+  + VE+DSL A+++I
Sbjct: 90  IGMQTVVARGYRNLIVESDSLKAIQII 116


>ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812157 [Glycine max]
          Length = 551

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +2

Query: 269 WACPDPGWSKLNCDGAVAEFGGKAGCGGVLRSDMGTFIMGFAASLNPC-SVTEAELWAIL 445
           W  P  G+ KLNCDGA   +G K   GGVLR   G FI+GF+ +L  C S  EAELWAI 
Sbjct: 128 WTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIK 187

Query: 446 ISLKLAKETGHIKIQVETDSLAALRLI 526
           I ++     G+  + VE+DSL A+++I
Sbjct: 188 IGMQTVVARGYRNLIVESDSLKAIQII 214


>ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811627 [Glycine max]
          Length = 445

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +2

Query: 269 WACPDPGWSKLNCDGAVAEFGGKAGCGGVLRSDMGTFIMGFAASLNPC-SVTEAELWAIL 445
           W  P  G+ KLNCDGA   +G K   GGVLR   G FI+GF+ +L  C S  EAELWAI 
Sbjct: 128 WTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIK 187

Query: 446 ISLKLAKETGHIKIQVETDSLAALRLI 526
           I ++     G+  + VE+DSL A+++I
Sbjct: 188 IGMQTVVARGYRNLIVESDSLKAIQII 214


>gb|ABD33209.1| Ribonuclease H [Medicago truncatula]
          Length = 302

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 35/86 (40%), Positives = 48/86 (55%)
 Frame = +2

Query: 269 WACPDPGWSKLNCDGAVAEFGGKAGCGGVLRSDMGTFIMGFAASLNPCSVTEAELWAILI 448
           W  P  GW KLNCDGA    G  AGCGG+LR   GT+I GF+  +  C    AE+W + +
Sbjct: 202 WKRPLDGWVKLNCDGACKGNGELAGCGGLLRQSDGTWIKGFSRKIGACDALHAEMWGLYL 261

Query: 449 SLKLAKETGHIKIQVETDSLAALRLI 526
            L +A   G   + VE+DS   + ++
Sbjct: 262 GLDMAWREGISHLIVESDSKVLIDMV 287


>dbj|BAE71259.1| hypothetical protein [Trifolium pratense]
          Length = 553

 Score = 63.9 bits (154), Expect(2) = 5e-11
 Identities = 32/97 (32%), Positives = 50/97 (51%)
 Frame = +2

Query: 239 IKHQFDHFNPWACPDPGWSKLNCDGAVAEFGGKAGCGGVLRSDMGTFIMGFAASLNPCSV 418
           IK+    +  W  P   + KLN DGA  +   + GCGG++R   G ++ GFA  L  CS 
Sbjct: 376 IKNDMLVYISWKPPCGSYVKLNTDGACKD-QNRGGCGGIIRGSQGEWLGGFARGLGNCSA 434

Query: 419 TEAELWAILISLKLAKETGHIKIQVETDSLAALRLIQ 529
             AELW +   L  A+  G   +++  DS+  ++ I+
Sbjct: 435 IIAELWGVAEGLSYARRLGFTAVELNVDSVVVVQAIK 471



 Score = 29.6 bits (65), Expect(2) = 5e-11
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 633 KTMMDPVENFKIGHTMREAN*VADGLAKYSLSMESSCVTFDNVPL 767
           + M+D     KI H  RE+N  AD +A     ++   + +D+ P+
Sbjct: 488 RRMLDLDWEIKIEHAYRESNKCADAMANIGCHLDRETIFYDSCPI 532


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