BLASTX nr result

ID: Glycyrrhiza24_contig00018643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018643
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242667.1| uncharacterized protein LOC100788419 [Glycin...   438   e-121
gb|AFK38409.1| unknown [Medicago truncatula]                          431   e-118
ref|XP_003629290.1| Ribosomal RNA small subunit methyltransferas...   431   e-118
gb|AFK48391.1| unknown [Medicago truncatula]                          421   e-115
ref|XP_002303410.1| predicted protein [Populus trichocarpa] gi|2...   368   e-100

>ref|NP_001242667.1| uncharacterized protein LOC100788419 [Glycine max]
           gi|255642235|gb|ACU21382.1| unknown [Glycine max]
          Length = 392

 Score =  438 bits (1126), Expect = e-121
 Identities = 213/265 (80%), Positives = 230/265 (86%)
 Frame = -1

Query: 797 EHAARVQLPDAFLHFLEANGLDPSIYTAIDSTPRYIRLKPGCXXXXXXXXXXXXXKPEKL 618
           EHAA+  LPDAFL FLE NGLDPSIYTAIDSTPRYIRLKPG              K EKL
Sbjct: 4   EHAAKAPLPDAFLQFLETNGLDPSIYTAIDSTPRYIRLKPGFESCIEEVEAEVKCKLEKL 63

Query: 617 EWLPGFYSLPSHIQIAGTKPYQEGKIYGIDASSGAAVMALNISPGDHVLDLCAAPGAKLC 438
           EWLPGFYSLP H+QIAG++ Y+EGKIYGIDA+SGAAVMALNISPGDHVLDLCAAPGAKLC
Sbjct: 64  EWLPGFYSLPPHVQIAGSRAYREGKIYGIDAASGAAVMALNISPGDHVLDLCAAPGAKLC 123

Query: 437 MILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSLIPGGFRSDLT 258
           MILDLLGDSGSV GVD ARHRLAACRTMLQKY +G RCRLFVADGT FS+IP GF SD  
Sbjct: 124 MILDLLGDSGSVAGVDVARHRLAACRTMLQKYMIGGRCRLFVADGTAFSVIPSGFCSDCK 183

Query: 257 SCVSGLEERIEVFKEWTSRRPWKERKRANKCGTPQLLSRSDPPELIYYGRHSGVIGLTKG 78
           SC SGLE R++VFKEWTSRRPWKERK+ANK GT QL+SRS PPELIYYG+HSGV+GLTKG
Sbjct: 184 SCESGLEGRVDVFKEWTSRRPWKERKKANKSGTAQLVSRSQPPELIYYGQHSGVVGLTKG 243

Query: 77  ELYKTVSDNEIASHGYDKVLVDAEC 3
           ELY+T+SDNEIA+HGYDKVLVDAEC
Sbjct: 244 ELYRTLSDNEIANHGYDKVLVDAEC 268


>gb|AFK38409.1| unknown [Medicago truncatula]
          Length = 389

 Score =  431 bits (1108), Expect = e-118
 Identities = 216/267 (80%), Positives = 232/267 (86%), Gaps = 1/267 (0%)
 Frame = -1

Query: 800 MEH-AARVQLPDAFLHFLEANGLDPSIYTAIDSTPRYIRLKPGCXXXXXXXXXXXXXKPE 624
           MEH AA   LPDAFL+FLE+NG+DPSIYT+IDSTPRYIRLKPG              KP+
Sbjct: 1   MEHGAATAALPDAFLNFLESNGIDPSIYTSIDSTPRYIRLKPGFEDYIEEFESEVKCKPQ 60

Query: 623 KLEWLPGFYSLPSHIQIAGTKPYQEGKIYGIDASSGAAVMALNISPGDHVLDLCAAPGAK 444
           KL+WLPGFY+LP +IQIA TK YQEGKIYGIDASSGAAVMAL I PGDHVLDLCAAPGAK
Sbjct: 61  KLDWLPGFYTLPPNIQIASTKAYQEGKIYGIDASSGAAVMALGIEPGDHVLDLCAAPGAK 120

Query: 443 LCMILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSLIPGGFRSD 264
           LCM+LDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFS+IP GF SD
Sbjct: 121 LCMMLDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSVIPLGFCSD 180

Query: 263 LTSCVSGLEERIEVFKEWTSRRPWKERKRANKCGTPQLLSRSDPPELIYYGRHSGVIGLT 84
             SC S LEER++VFKEWTSRRPWKERKR  KCGTPQ++S+S PPELIYYG HSGVIGLT
Sbjct: 181 --SCESRLEERMDVFKEWTSRRPWKERKRTKKCGTPQVVSKSHPPELIYYGGHSGVIGLT 238

Query: 83  KGELYKTVSDNEIASHGYDKVLVDAEC 3
           KGELYKT S NEIAS+GYDKVLVDAEC
Sbjct: 239 KGELYKTASKNEIASYGYDKVLVDAEC 265


>ref|XP_003629290.1| Ribosomal RNA small subunit methyltransferase, putative [Medicago
           truncatula] gi|355523312|gb|AET03766.1| Ribosomal RNA
           small subunit methyltransferase, putative [Medicago
           truncatula]
          Length = 389

 Score =  431 bits (1108), Expect = e-118
 Identities = 216/267 (80%), Positives = 232/267 (86%), Gaps = 1/267 (0%)
 Frame = -1

Query: 800 MEH-AARVQLPDAFLHFLEANGLDPSIYTAIDSTPRYIRLKPGCXXXXXXXXXXXXXKPE 624
           MEH AA   LPDAFL+FLE+NG+DPSIYT+IDSTPRYIRLKPG              KP+
Sbjct: 1   MEHGAATAALPDAFLNFLESNGIDPSIYTSIDSTPRYIRLKPGFEDYIEEFESEVKCKPQ 60

Query: 623 KLEWLPGFYSLPSHIQIAGTKPYQEGKIYGIDASSGAAVMALNISPGDHVLDLCAAPGAK 444
           KL+WLPGFY+LP +IQIA TK YQEGKIYGIDASSGAAVMAL I PGDHVLDLCAAPGAK
Sbjct: 61  KLDWLPGFYTLPPNIQIASTKAYQEGKIYGIDASSGAAVMALGIEPGDHVLDLCAAPGAK 120

Query: 443 LCMILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSLIPGGFRSD 264
           LCM+LDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFS+IP GF SD
Sbjct: 121 LCMMLDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSVIPLGFCSD 180

Query: 263 LTSCVSGLEERIEVFKEWTSRRPWKERKRANKCGTPQLLSRSDPPELIYYGRHSGVIGLT 84
             SC S LEER++VFKEWTSRRPWKERKR  KCGTPQ++S+S PPELIYYG HSGVIGLT
Sbjct: 181 --SCESRLEERMDVFKEWTSRRPWKERKRTKKCGTPQVVSKSHPPELIYYGGHSGVIGLT 238

Query: 83  KGELYKTVSDNEIASHGYDKVLVDAEC 3
           KGELYKT S NEIAS+GYDKVLVDAEC
Sbjct: 239 KGELYKTASKNEIASYGYDKVLVDAEC 265


>gb|AFK48391.1| unknown [Medicago truncatula]
          Length = 311

 Score =  421 bits (1081), Expect = e-115
 Identities = 213/267 (79%), Positives = 231/267 (86%), Gaps = 1/267 (0%)
 Frame = -1

Query: 800 MEH-AARVQLPDAFLHFLEANGLDPSIYTAIDSTPRYIRLKPGCXXXXXXXXXXXXXKPE 624
           MEH AA   LPDAFL+FLE+NG+DPSIYT+IDSTPRYIRLKPG              KP+
Sbjct: 1   MEHGAATAALPDAFLNFLESNGIDPSIYTSIDSTPRYIRLKPGFEDYIEEFESEVKCKPQ 60

Query: 623 KLEWLPGFYSLPSHIQIAGTKPYQEGKIYGIDASSGAAVMALNISPGDHVLDLCAAPGAK 444
           KL+WLPGFY+LP +IQIA TK YQEG+IYGIDASSGAAVMAL I PGDHVLDLCAAPGAK
Sbjct: 61  KLDWLPGFYTLPPNIQIASTKAYQEGRIYGIDASSGAAVMALGIEPGDHVLDLCAAPGAK 120

Query: 443 LCMILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSLIPGGFRSD 264
           LCM+LDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFS+IP GF SD
Sbjct: 121 LCMMLDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSVIPLGFCSD 180

Query: 263 LTSCVSGLEERIEVFKEWTSRRPWKERKRANKCGTPQLLSRSDPPELIYYGRHSGVIGLT 84
            +S  S LEER++VFKE TSRRPWKERKR  KCGTPQ++S+S PPELIYYG HSGVIGLT
Sbjct: 181 -SSGESRLEERMDVFKERTSRRPWKERKRTKKCGTPQVVSKSHPPELIYYGGHSGVIGLT 239

Query: 83  KGELYKTVSDNEIASHGYDKVLVDAEC 3
           KGELYKT S NEIAS+GYDKVLVDAEC
Sbjct: 240 KGELYKTASKNEIASYGYDKVLVDAEC 266


>ref|XP_002303410.1| predicted protein [Populus trichocarpa] gi|222840842|gb|EEE78389.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  368 bits (945), Expect = e-100
 Identities = 183/268 (68%), Positives = 212/268 (79%), Gaps = 3/268 (1%)
 Frame = -1

Query: 797 EHAARVQLPDAFLHFLEANGLDPSIYTAIDSTPRYIRLKPGCXXXXXXXXXXXXXKPEKL 618
           E  +++ LPDAFL FL+ NG+DP IYTAI+STPRYIRLKPG              + +KL
Sbjct: 3   EETSKLPLPDAFLDFLQTNGIDPLIYTAIESTPRYIRLKPGSEAYLEEIEAEIKCRLQKL 62

Query: 617 EWLPGFYSLPSHIQIAGTKPYQEGKIYGIDASSGAAVMALNISPGDHVLDLCAAPGAKLC 438
            WLPGFYSLP HIQIA +KPY+EGKIYGIDA+SGAAV+AL+IS GDHVLDLC APGAKLC
Sbjct: 63  NWLPGFYSLPPHIQIANSKPYKEGKIYGIDAASGAAVLALDISVGDHVLDLCCAPGAKLC 122

Query: 437 MILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSLIPGGFRSDLT 258
           MI DLLGDSGSVTGVD ARHRLAACRTMLQKY LGD CRLFVADGTTFSL+P     D  
Sbjct: 123 MISDLLGDSGSVTGVDVARHRLAACRTMLQKYVLGDACRLFVADGTTFSLMPVRDHLDSI 182

Query: 257 SCVSGLEERIEVFKEWTSRRPWKERKRANKC---GTPQLLSRSDPPELIYYGRHSGVIGL 87
           SC   LEE+ + F+EWTSRRPWKERKRA +       +L+S +D PELI+YG+ SGV+GL
Sbjct: 183 SCEFALEEKKDTFREWTSRRPWKERKRAARARENAASRLVSETDHPELIFYGKASGVVGL 242

Query: 86  TKGELYKTVSDNEIASHGYDKVLVDAEC 3
           +K ELY+TVS +E++S GYDKVLVDAEC
Sbjct: 243 SKDELYQTVSSSEVSSSGYDKVLVDAEC 270


Top