BLASTX nr result

ID: Glycyrrhiza24_contig00018627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018627
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814...   461   e-128
ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807...   456   e-126
ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 k...   421   e-115
ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, pu...   362   6e-98
ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|2...   360   4e-97

>ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
          Length = 347

 Score =  461 bits (1187), Expect = e-128
 Identities = 233/306 (76%), Positives = 247/306 (80%), Gaps = 4/306 (1%)
 Frame = +2

Query: 86  KNLNSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTL 265
           KNLNSVFYADSYHPIQAGSIDGTD++PHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTL
Sbjct: 6   KNLNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTL 65

Query: 266 FVGRLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAH 445
           FV RLSRLTTE  LRKVMSKYG+VKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAH
Sbjct: 66  FVARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAH 125

Query: 446 HLIVDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXXQLRFGGREKPFRAPLKPIPYED 625
           HLIVDDSEIIVDYNRQQLMPGWIP              QLRFGGREKPFRAPLKPIPYE+
Sbjct: 126 HLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGREKPFRAPLKPIPYEE 185

Query: 626 LKKLGIPPPPEGRYMSRFQVPSPPXXXXXXXXXXXXXXXXXXXXXXXK----EGARKSPV 793
           LKKLGIPPPPEGRYMSRFQVPSPP                            E   +S V
Sbjct: 186 LKKLGIPPPPEGRYMSRFQVPSPPRSERSLSDREEDSHSHRRGSNDRNRNKTEDGLRSSV 245

Query: 794 DMEEGRYKRSSSHREDHSRGRSSMERSGHYHDRSSAEKEHRYRSSTETDRHSRKRKEKDD 973
           D+EEG Y RSSSHR++HSRGRSSMERSG YHDRSS+EKEHR+ SST+ D+HS+KRKE D 
Sbjct: 246 DIEEGHY-RSSSHRDNHSRGRSSMERSGRYHDRSSSEKEHRHGSSTDKDKHSQKRKESDR 304

Query: 974 HSRRRE 991
            S  +E
Sbjct: 305 SSLEKE 310


>ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807978 [Glycine max]
          Length = 358

 Score =  456 bits (1173), Expect = e-126
 Identities = 228/304 (75%), Positives = 245/304 (80%), Gaps = 2/304 (0%)
 Frame = +2

Query: 86  KNLNSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTL 265
           KNLNSVFYADSYHPIQAGSIDGTD++PHDNAVYRAQLCSSIGLYDPFGDP+A GDPYCTL
Sbjct: 6   KNLNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPRAAGDPYCTL 65

Query: 266 FVGRLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAH 445
           FV RLSRLT E  LRKVMSKYG+VKN RLVRDIVTGASRGYAFVEYETEREMRRAYMDAH
Sbjct: 66  FVARLSRLTNEDNLRKVMSKYGRVKNFRLVRDIVTGASRGYAFVEYETEREMRRAYMDAH 125

Query: 446 HLIVDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXXQLRFGGREKPFRAPLKPIPYED 625
           HLIVDDSEIIVDYNRQQLMPGWIP              QLRFGG+EKPFRAPLKPIPYE+
Sbjct: 126 HLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGKEKPFRAPLKPIPYEE 185

Query: 626 LKKLGIPPPPEGRYMSRFQVPSPPXXXXXXXXXXXXXXXXXXXXXXXK--EGARKSPVDM 799
           LKKLGIPPPPEGRYMSRFQVPSPP                          E + +S VD+
Sbjct: 186 LKKLGIPPPPEGRYMSRFQVPSPPRRERNLSDREEDSHSHRRGSNDRNRTEDSHRSSVDI 245

Query: 800 EEGRYKRSSSHREDHSRGRSSMERSGHYHDRSSAEKEHRYRSSTETDRHSRKRKEKDDHS 979
            EG + RSSSHR+DHSRGRSS+ERSG YHDRSS+EKEHRYRSST+ D+HS+KRKE D  S
Sbjct: 246 GEG-HCRSSSHRDDHSRGRSSLERSGRYHDRSSSEKEHRYRSSTDKDKHSQKRKESDRSS 304

Query: 980 RRRE 991
             +E
Sbjct: 305 SEKE 308


>ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
           truncatula] gi|355499353|gb|AES80556.1| U11/U12 small
           nuclear ribonucleoprotein 35 kDa protein [Medicago
           truncatula]
          Length = 566

 Score =  421 bits (1082), Expect = e-115
 Identities = 218/305 (71%), Positives = 236/305 (77%), Gaps = 6/305 (1%)
 Frame = +2

Query: 86  KNLNSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTL 265
           +NLNSVFY+++YHPIQAGSIDGTDI+PHDNA++RAQLCSSIGLYDPFGDPKATGDPYCTL
Sbjct: 6   RNLNSVFYSNAYHPIQAGSIDGTDIVPHDNAIFRAQLCSSIGLYDPFGDPKATGDPYCTL 65

Query: 266 FVGRLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAH 445
           FVGRLSRLTTE TLRKVMS++GQVKNLRLVRDIVTGASRGYAFVE+ETEREMRRAYMDAH
Sbjct: 66  FVGRLSRLTTEETLRKVMSEFGQVKNLRLVRDIVTGASRGYAFVEFETEREMRRAYMDAH 125

Query: 446 HLIVDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXXQLRFGGREKPFRAPLKPIPYED 625
           HLIVDD EIIVDYNRQQLMPGWIP              QLRFGGREKPFRAPLKPIPYE+
Sbjct: 126 HLIVDDCEIIVDYNRQQLMPGWIPRRLGGGLSGNKESGQLRFGGREKPFRAPLKPIPYEE 185

Query: 626 LKKLGIPPPPEGRYMSRFQVPSPPXXXXXXXXXXXXXXXXXXXXXXXKEGARKSPVDMEE 805
           LKKLGIPPPPEG YMSRFQVPSPP                       +   +KS   MEE
Sbjct: 186 LKKLGIPPPPEGSYMSRFQVPSPP---RRDTNLSDKDEDSDRRGSSERNMTKKS--KMEE 240

Query: 806 GRYKRSSSHREDHSRGRSSMERSGHYHDRSSAEKEHRYR-----SSTETDR-HSRKRKEK 967
             YK SSSHR D+SRGRSS ERS HYHDRSS ++  R R     SS  +DR H R   EK
Sbjct: 241 EHYKISSSHRGDYSRGRSSSERSDHYHDRSSLKRTDRDRYHDRSSSERSDRYHKRSSAEK 300

Query: 968 DDHSR 982
            DH+R
Sbjct: 301 ADHNR 305



 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 38/75 (50%), Positives = 50/75 (66%)
 Frame = +2

Query: 767 KEGARKSPVDMEEGRYKRSSSHREDHSRGRSSMERSGHYHDRSSAEKEHRYRSSTETDRH 946
           +  A K+  D +   + +S S R DH R + S ERS  Y DRSS E+EH  RSST++D+H
Sbjct: 485 RSSAEKADRDYD---HDKSPSERSDHYRVKCSSERSDRYQDRSSTEREHSNRSSTKSDKH 541

Query: 947 SRKRKEKDDHSRRRE 991
           SRKRKE+D+ SRR E
Sbjct: 542 SRKRKERDESSRRWE 556


>ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
           communis] gi|223530750|gb|EEF32618.1| U1 small nuclear
           ribonucleoprotein 70 kD, putative [Ricinus communis]
          Length = 389

 Score =  362 bits (930), Expect = 6e-98
 Identities = 186/304 (61%), Positives = 215/304 (70%), Gaps = 4/304 (1%)
 Frame = +2

Query: 92  LNSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTLFV 271
           +NSVFYA SYHPIQAGSIDGTDILPHDNA+YRA LC S GLYDP GDPK  GDP+CTLFV
Sbjct: 6   VNSVFYAKSYHPIQAGSIDGTDILPHDNAIYRAFLCFSAGLYDPLGDPKVIGDPFCTLFV 65

Query: 272 GRLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAHHL 451
           GRLS  TTE+TL K MSKYG+V+NLRLVRDIVTGASRGYAFVEY TEREMRRAYMDAHH 
Sbjct: 66  GRLSHSTTENTLLKAMSKYGKVRNLRLVRDIVTGASRGYAFVEYGTEREMRRAYMDAHHS 125

Query: 452 IVDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXXQLRFGGREKPFRAPLKPIPYEDLK 631
            +DDSEIIVDYNRQQLMPGWIP              QLRFGGRE+PFRAPL+ +P+++LK
Sbjct: 126 FIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQSVPFDELK 185

Query: 632 KLGIPPPPEGRYMSRFQVPSPPXXXXXXXXXXXXXXXXXXXXXXXKEGA--RKSPVDMEE 805
           +LGI PPPEGRYMSRF VPSPP                       +EG+  R+S +D EE
Sbjct: 186 RLGISPPPEGRYMSRFGVPSPP--------------RRNQSSIDREEGSSHRRSSIDKEE 231

Query: 806 GRYKRSSSHREDHSRGRSSMERSGHYHDRSSAEKEHRY--RSSTETDRHSRKRKEKDDHS 979
            R++  S+ RE+  R RS   +  H H  SS E+E R+  RSS   + HS K   ++   
Sbjct: 232 SRHRSRSAEREERYRNRSPRLKEEHSHRSSSVEREERHSKRSSRGKEEHSGKWHSEEKEG 291

Query: 980 RRRE 991
           R R+
Sbjct: 292 RHRK 295


>ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|222837365|gb|EEE75744.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  360 bits (923), Expect = 4e-97
 Identities = 181/304 (59%), Positives = 210/304 (69%), Gaps = 3/304 (0%)
 Frame = +2

Query: 86  KNLNSVFYADSYHPIQAGSIDGTDILPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTL 265
           +++NSVFYAD+YHPIQAGSIDGTD  PHDNAVYRA LCSS GLYDPFGDPKA GDPYCT+
Sbjct: 4   RSINSVFYADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKAIGDPYCTI 63

Query: 266 FVGRLSRLTTEHTLRKVMSKYGQVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAH 445
           FVGRLS LTTE TLRK MSKYG+VKNLRLVR IVTGASRGYAFVE+ETEREMRRAY D  
Sbjct: 64  FVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFVEFETEREMRRAYKDGQ 123

Query: 446 HLIVDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXXXXQLRFGGREKPFRAPLKPIPYED 625
           H  +DDSEIIVDYNRQQLMPGWIP              QLRFGGRE+PFRAPL+ IPY+D
Sbjct: 124 HSYIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQTIPYDD 183

Query: 626 LKKLGIPPPPEGRYMSRFQVPSPPXXXXXXXXXXXXXXXXXXXXXXXKEGARKSPVDMEE 805
           LK+LGIPPPPEGRYMS ++VPSPP                       +E +       +E
Sbjct: 184 LKRLGIPPPPEGRYMSHYEVPSPPRRKRSSRDKEESSHRRSSIDKEAEESSNIRSYRDKE 243

Query: 806 GRYKRSSSHREDHSRGRSSMERSGHYHDRSSAEKE---HRYRSSTETDRHSRKRKEKDDH 976
             Y+R   H +     RSS++R  HY  RS  + E   H+     E   H R  +++++ 
Sbjct: 244 EHYERGGYHHK-----RSSLDREEHYEKRSPVDMEEPSHKKLRDREERTHKRSSRDREEG 298

Query: 977 SRRR 988
           SR+R
Sbjct: 299 SRKR 302