BLASTX nr result

ID: Glycyrrhiza24_contig00018621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018621
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...   626   e-177
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   412   e-112
emb|CBI27197.3| unnamed protein product [Vitis vinifera]              412   e-112
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...   396   e-108
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...   381   e-103

>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score =  626 bits (1614), Expect = e-177
 Identities = 310/389 (79%), Positives = 340/389 (87%)
 Frame = +3

Query: 3    GTELLTHSPATVKGGDLGAGPVHSVQEGTSINIEDNKNTQHSEAQNNNADSFSRINKVSK 182
            G ELL+HSPA   GGDLGAGP+HSVQEG SIN++D    Q SEA+N+N DS SRI+K+SK
Sbjct: 1465 GNELLSHSPAITMGGDLGAGPMHSVQEGPSINLQDR---QLSEAKNSNTDSLSRIDKLSK 1521

Query: 183  HKMSNHFDVSVNNPGRPLHDFLLPNHHHKGGVNMTNSIATNNLLPVLGLCAPNANQIESS 362
            HKM++HFD SV+N GR L D  LP+H  KGG++MT+S+ TNNLLPVLGLCAPNAN+I+SS
Sbjct: 1522 HKMNSHFDASVSNLGRSLPDIFLPSHP-KGGLSMTSSMPTNNLLPVLGLCAPNANRIDSS 1580

Query: 363  ESNISKLNWRQSRHGTRQEFPFSLAPCTGTSMDAEVRSKETAANTKLSDASTENLQQGFR 542
            ESNISK NWR  RHG+RQEFPFSLAPC+GTS+DAEVRSKE AANTKL+DASTENLQ  F+
Sbjct: 1581 ESNISKFNWRH-RHGSRQEFPFSLAPCSGTSVDAEVRSKEVAANTKLADASTENLQPSFK 1639

Query: 543  NSIPDNSLPFIPFPPSVQGKESDAFENSGSRFSAFQEKMALPNLPFDERLLVRFPLTTKS 722
            NSIPDNSLPF+PFPPSVQGKESDAFENSG+RFS FQEKMALPNLPFDERLL RFPLTTKS
Sbjct: 1640 NSIPDNSLPFVPFPPSVQGKESDAFENSGARFSHFQEKMALPNLPFDERLLARFPLTTKS 1699

Query: 723  IPNSHLDLLPNLSLGGRLEALNGSMQDLSTIPALPTFKIPPGDLFRYNQQDRDVTPTLGL 902
            +PNSHLDLLP+LS+GGRLE+LNGSMQDL T+P LP FKIPP DLFRYNQQDRDV PTLGL
Sbjct: 1700 MPNSHLDLLPSLSIGGRLESLNGSMQDLPTMPVLPNFKIPPEDLFRYNQQDRDVPPTLGL 1759

Query: 903  GQRPTTLSSFPENHRKVLENIMMRTXXXXXXXXXXXXXXDGWSEDELDSLWIGVRRHGRG 1082
            GQRPTT SSFPENHRKVLENIMMRT              DGWSEDELDSLWIGVRRHGRG
Sbjct: 1760 GQRPTTFSSFPENHRKVLENIMMRTGSGSSNLLKKKSRSDGWSEDELDSLWIGVRRHGRG 1819

Query: 1083 NWDAMLRDPKLKFSKYKTSEDLSVRWEEE 1169
            NWDAMLRDPKLKFSKYKTSEDLSVRWEEE
Sbjct: 1820 NWDAMLRDPKLKFSKYKTSEDLSVRWEEE 1848


>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  412 bits (1058), Expect = e-112
 Identities = 214/366 (58%), Positives = 261/366 (71%), Gaps = 2/366 (0%)
 Frame = +3

Query: 78   QEGTSINIEDNKNTQHSEAQNNNADSFSRINKVSKHKMSNHFDVSVNNPGRPLHDFLLPN 257
            ++  +I++ED K  Q  +A    ADS  R+ + S+HK  +H D+S    G P  D  LP+
Sbjct: 1503 EKAPAIDLEDGKIGQPLDAMKGKADSNVRLGRQSRHK--SHLDLSARALGHPSPDIFLPS 1560

Query: 258  HHHKGGVNMTNSIATNNLLPVLGLCAPNANQIESSESNISKLNWRQSRHGTRQEFPFSLA 437
            HH++G  + TN +A NNLLPVLGLCAPNA Q+ESS  N S+ N RQ+RHG   EFPF LA
Sbjct: 1561 HHYQG-TSYTNLVA-NNLLPVLGLCAPNATQLESSHKNFSRSNGRQTRHGVGPEFPFCLA 1618

Query: 438  PCTGTSMDAEVRSKETAANT-KLSDASTENLQQGFRNSIPDNSLPFIPFPPSV-QGKESD 611
            PC+GTSM+ +++  E A++  +L DAST+  Q   +N+ PDN  PF P PP+  Q K SD
Sbjct: 1619 PCSGTSMEMDIKGHENASDKLRLLDASTDLPQLQRKNNNPDNCSPFGPSPPAAPQEKGSD 1678

Query: 612  AFENSGSRFSAFQEKMALPNLPFDERLLVRFPLTTKSIPNSHLDLLPNLSLGGRLEALNG 791
              E SG+ FS F EKMA+ NLPFDE+LL RFPL  +S+PN + D LP+LSLG R+EA N 
Sbjct: 1679 YVERSGAGFSDFPEKMAMANLPFDEKLLPRFPLPARSMPNPYPDFLPSLSLGTRVEAAND 1738

Query: 792  SMQDLSTIPALPTFKIPPGDLFRYNQQDRDVTPTLGLGQRPTTLSSFPENHRKVLENIMM 971
            S+QDLST+P LP FK PP D  RYNQQ+R+  PTLGLGQ P TLSSFPENHRKVLENIMM
Sbjct: 1739 SVQDLSTMPLLPKFKFPPQDAPRYNQQEREGPPTLGLGQTPATLSSFPENHRKVLENIMM 1798

Query: 972  RTXXXXXXXXXXXXXXDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTSEDLS 1151
            RT              +GWSEDELD LWIGVRRHGRGNWDAMLRDP+LKFSKYKT++DLS
Sbjct: 1799 RTGSGSMNLFKKKSRVEGWSEDELDFLWIGVRRHGRGNWDAMLRDPRLKFSKYKTADDLS 1858

Query: 1152 VRWEEE 1169
             RWEEE
Sbjct: 1859 ARWEEE 1864


>emb|CBI27197.3| unnamed protein product [Vitis vinifera]
          Length = 1638

 Score =  412 bits (1058), Expect = e-112
 Identities = 214/366 (58%), Positives = 261/366 (71%), Gaps = 2/366 (0%)
 Frame = +3

Query: 78   QEGTSINIEDNKNTQHSEAQNNNADSFSRINKVSKHKMSNHFDVSVNNPGRPLHDFLLPN 257
            ++  +I++ED K  Q  +A    ADS  R+ + S+HK  +H D+S    G P  D  LP+
Sbjct: 890  EKAPAIDLEDGKIGQPLDAMKGKADSNVRLGRQSRHK--SHLDLSARALGHPSPDIFLPS 947

Query: 258  HHHKGGVNMTNSIATNNLLPVLGLCAPNANQIESSESNISKLNWRQSRHGTRQEFPFSLA 437
            HH++G  + TN +A NNLLPVLGLCAPNA Q+ESS  N S+ N RQ+RHG   EFPF LA
Sbjct: 948  HHYQG-TSYTNLVA-NNLLPVLGLCAPNATQLESSHKNFSRSNGRQTRHGVGPEFPFCLA 1005

Query: 438  PCTGTSMDAEVRSKETAANT-KLSDASTENLQQGFRNSIPDNSLPFIPFPPSV-QGKESD 611
            PC+GTSM+ +++  E A++  +L DAST+  Q   +N+ PDN  PF P PP+  Q K SD
Sbjct: 1006 PCSGTSMEMDIKGHENASDKLRLLDASTDLPQLQRKNNNPDNCSPFGPSPPAAPQEKGSD 1065

Query: 612  AFENSGSRFSAFQEKMALPNLPFDERLLVRFPLTTKSIPNSHLDLLPNLSLGGRLEALNG 791
              E SG+ FS F EKMA+ NLPFDE+LL RFPL  +S+PN + D LP+LSLG R+EA N 
Sbjct: 1066 YVERSGAGFSDFPEKMAMANLPFDEKLLPRFPLPARSMPNPYPDFLPSLSLGTRVEAAND 1125

Query: 792  SMQDLSTIPALPTFKIPPGDLFRYNQQDRDVTPTLGLGQRPTTLSSFPENHRKVLENIMM 971
            S+QDLST+P LP FK PP D  RYNQQ+R+  PTLGLGQ P TLSSFPENHRKVLENIMM
Sbjct: 1126 SVQDLSTMPLLPKFKFPPQDAPRYNQQEREGPPTLGLGQTPATLSSFPENHRKVLENIMM 1185

Query: 972  RTXXXXXXXXXXXXXXDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTSEDLS 1151
            RT              +GWSEDELD LWIGVRRHGRGNWDAMLRDP+LKFSKYKT++DLS
Sbjct: 1186 RTGSGSMNLFKKKSRVEGWSEDELDFLWIGVRRHGRGNWDAMLRDPRLKFSKYKTADDLS 1245

Query: 1152 VRWEEE 1169
             RWEEE
Sbjct: 1246 ARWEEE 1251


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score =  396 bits (1017), Expect = e-108
 Identities = 205/361 (56%), Positives = 258/361 (71%), Gaps = 2/361 (0%)
 Frame = +3

Query: 93   INIEDNKNTQHSEAQNNNADSFSRINKVSKHKMSNHFDVSVNNPGRPLHDFLLPNHHHKG 272
            I++ED + TQ  +A  +NAD+  +   +S HK+  H D+S+N+ G P  D  LP H ++G
Sbjct: 1502 IDLEDYEFTQ-PDATRSNADATIKSGHLSNHKLRGHLDLSINSLGHP-SDTKLPAHQNQG 1559

Query: 273  GVNMTNSIATNNLLPVLGLCAPNANQIESSESNISKLNWRQSRHGTRQEFPFSLAPCTGT 452
              N  N + +NNLLPVLGLCAPNANQ++    N S+   RQS+  T  EFPFSL PC+GT
Sbjct: 1560 TGN-ANLLLSNNLLPVLGLCAPNANQLDLLHKNSSRSKGRQSKPVTGPEFPFSLPPCSGT 1618

Query: 453  SMDAEVRSKETAANT-KLSDASTENLQQGFRNSIPDNSLPFIPFPPSVQ-GKESDAFENS 626
            S++ +V+ +ET ++  KL DAS E LQQ  +N++ D   PF P PP +  GK+SD  E S
Sbjct: 1619 SIETDVKHQETTSDKPKLLDASAEVLQQRLKNNLSDGWHPFSPCPPPISHGKDSDRLEGS 1678

Query: 627  GSRFSAFQEKMALPNLPFDERLLVRFPLTTKSIPNSHLDLLPNLSLGGRLEALNGSMQDL 806
             S F+ FQEKM+LPNLPFDE+LL RFPL +KSIP++H DLLP+LSLG RLEA+N SM+DL
Sbjct: 1679 SSSFAGFQEKMSLPNLPFDEKLLPRFPLPSKSIPSTHHDLLPSLSLGRRLEAVNDSMRDL 1738

Query: 807  STIPALPTFKIPPGDLFRYNQQDRDVTPTLGLGQRPTTLSSFPENHRKVLENIMMRTXXX 986
              +P LP  K  P D  RYNQ +++V PTLGLGQ P++  SFPENHRKVLENI+MRT   
Sbjct: 1739 PAMPLLPNLKFHPQDAIRYNQLEKEVPPTLGLGQMPSSFPSFPENHRKVLENIIMRTGSG 1798

Query: 987  XXXXXXXXXXXDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTSEDLSVRWEE 1166
                       D WSEDELD LW+GVRR+GRGNWDAMLRDP+LKFSKYKTSEDL+VRWEE
Sbjct: 1799 SSSLYSKKSKVDVWSEDELDFLWVGVRRYGRGNWDAMLRDPRLKFSKYKTSEDLAVRWEE 1858

Query: 1167 E 1169
            E
Sbjct: 1859 E 1859


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score =  381 bits (979), Expect = e-103
 Identities = 198/362 (54%), Positives = 253/362 (69%), Gaps = 3/362 (0%)
 Frame = +3

Query: 93   INIEDNKNTQHSEAQNNNADSFSRINKVSKHKMSNHFDVSVNNPGRPLHDFLLP--NHHH 266
            IN+ED++ +Q  +A   NAD+  ++  +S HK+S+H D+S+N+ G P  D +LP   +H 
Sbjct: 1501 INLEDDEFSQQ-DATKRNADATIKLGHLSNHKLSSHLDLSMNSLGHPSSDTILPIPQNHG 1559

Query: 267  KGGVNMTNSIATNNLLPVLGLCAPNANQIESSESNISKLNWRQSRHGTRQEFPFSLAPCT 446
            +G  N+ +S   NN LPVLGLCAPNANQ++    + S+   +QS+     EFPFSL PC+
Sbjct: 1560 RGNKNLLSS---NNQLPVLGLCAPNANQLDLLHKSSSRSKGQQSKPVPGPEFPFSLPPCS 1616

Query: 447  GTSMDAEVRSKETAANT-KLSDASTENLQQGFRNSIPDNSLPFIPFPPSVQGKESDAFEN 623
             TS++ +++ +E A++  KL DAS E LQ   +N+  D    F P PP  QGK+SD  E 
Sbjct: 1617 ETSIEMDIKHQEPASDKPKLLDASAEILQPRLKNNFADGWHSFSPCPPISQGKDSDHLEG 1676

Query: 624  SGSRFSAFQEKMALPNLPFDERLLVRFPLTTKSIPNSHLDLLPNLSLGGRLEALNGSMQD 803
            S S F+ FQEKM+LPN PFDE LL RFPL +KS+P++H DLLP+LSLG RLEA+N S +D
Sbjct: 1677 SSSSFAGFQEKMSLPNFPFDENLLSRFPLPSKSMPSNH-DLLPSLSLGRRLEAVNDSTRD 1735

Query: 804  LSTIPALPTFKIPPGDLFRYNQQDRDVTPTLGLGQRPTTLSSFPENHRKVLENIMMRTXX 983
            L  +P LP  K PP D  RYNQ +R+V PTLGLGQ P+  SSFPENHRKVLENIMMRT  
Sbjct: 1736 LPAMPLLPNLKFPPQDATRYNQLEREVPPTLGLGQMPSAFSSFPENHRKVLENIMMRTGS 1795

Query: 984  XXXXXXXXXXXXDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTSEDLSVRWE 1163
                        D WSEDELD LW+GVRR+GRGNWDA+LRDP+LKFSKYKTSEDL+ RWE
Sbjct: 1796 GSSSLYRKKSKIDVWSEDELDFLWVGVRRYGRGNWDAILRDPRLKFSKYKTSEDLAARWE 1855

Query: 1164 EE 1169
            EE
Sbjct: 1856 EE 1857


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