BLASTX nr result

ID: Glycyrrhiza24_contig00018596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018596
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica...    74   2e-11
ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica...    69   6e-10
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-08
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...    62   5e-08
emb|CBI22072.3| unnamed protein product [Vitis vinifera]               62   5e-08

>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
           max]
          Length = 1162

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 42/103 (40%), Positives = 62/103 (60%)
 Frame = +3

Query: 165 KFDKEKLESLQREGYTVVVPKKLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQ 344
           K +K+K E L R+   V    +++ S IL++F +S DEVY F+ +LS +ER LVHQ++ +
Sbjct: 8   KREKKKGEPLFRQNPNVDEVTRIRISQILEHFRASNDEVYKFDADLSNQERALVHQMALK 67

Query: 345 MGLNCTFFGRGIKCKAFVHKTKKEVDTTKVLEILPHVTFSKES 473
           MG     +G G + +  V K KK+VDT      LP  TFS E+
Sbjct: 68  MGFRSKSYGLGKERRVCVQKMKKKVDTDNGFGSLPQFTFSGEA 110


>ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
           max]
          Length = 1164

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/103 (40%), Positives = 58/103 (56%)
 Frame = +3

Query: 165 KFDKEKLESLQREGYTVVVPKKLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQ 344
           K  K+K E L R+   V    ++  S IL+ F +S DEVY F+  LS +ER LVHQ++ +
Sbjct: 9   KTGKKKGEPLFRQNPNVDEVTRICISQILEQFRASNDEVYKFDAGLSNQERALVHQMALK 68

Query: 345 MGLNCTFFGRGIKCKAFVHKTKKEVDTTKVLEILPHVTFSKES 473
           MG     +G G + +  V K KK+VDT      LP  TFS E+
Sbjct: 69  MGFRSKSYGLGKERRVCVQKMKKKVDTDNGFGSLPPFTFSGEA 111


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
           predicted protein [Populus trichocarpa]
          Length = 1195

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/100 (35%), Positives = 59/100 (59%)
 Frame = +3

Query: 174 KEKLESLQREGYTVVVPKKLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQMGL 353
           K + ++ Q++   V     ++ S IL+ F ++ D+VY FE  LS  +R +VH++ ++MG+
Sbjct: 4   KNQRKAAQQQNPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKKMGM 63

Query: 354 NCTFFGRGIKCKAFVHKTKKEVDTTKVLEILPHVTFSKES 473
                GRG + +  V+K  K++D  K  E L H+TFS ES
Sbjct: 64  KSKSSGRGGQRRVSVYKNTKKLDDVKGKENLTHLTFSGES 103


>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
           vinifera]
          Length = 1231

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 33/84 (39%), Positives = 54/84 (64%)
 Frame = +3

Query: 228 KLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQMGLNCTFFGRGIKCKAFVHKT 407
           +++ S  LQ F  + +EVY FE  L+  ER +VH++ ++MG+     GRG + +  V+KT
Sbjct: 24  RIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRVSVYKT 83

Query: 408 KKEVDTTKVLEILPHVTFSKESNQ 479
           KK+VDT K  E  P++ FS+E+ +
Sbjct: 84  KKKVDTKKE-EGNPYLNFSEEAKE 106


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 33/84 (39%), Positives = 54/84 (64%)
 Frame = +3

Query: 228 KLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQMGLNCTFFGRGIKCKAFVHKT 407
           +++ S  LQ F  + +EVY FE  L+  ER +VH++ ++MG+     GRG + +  V+KT
Sbjct: 24  RIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRVSVYKT 83

Query: 408 KKEVDTTKVLEILPHVTFSKESNQ 479
           KK+VDT K  E  P++ FS+E+ +
Sbjct: 84  KKKVDTKKE-EGNPYLNFSEEAKE 106


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