BLASTX nr result
ID: Glycyrrhiza24_contig00018596
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00018596 (587 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica... 74 2e-11 ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica... 69 6e-10 ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2... 65 1e-08 ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica... 62 5e-08 emb|CBI22072.3| unnamed protein product [Vitis vinifera] 62 5e-08 >ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine max] Length = 1162 Score = 73.9 bits (180), Expect = 2e-11 Identities = 42/103 (40%), Positives = 62/103 (60%) Frame = +3 Query: 165 KFDKEKLESLQREGYTVVVPKKLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQ 344 K +K+K E L R+ V +++ S IL++F +S DEVY F+ +LS +ER LVHQ++ + Sbjct: 8 KREKKKGEPLFRQNPNVDEVTRIRISQILEHFRASNDEVYKFDADLSNQERALVHQMALK 67 Query: 345 MGLNCTFFGRGIKCKAFVHKTKKEVDTTKVLEILPHVTFSKES 473 MG +G G + + V K KK+VDT LP TFS E+ Sbjct: 68 MGFRSKSYGLGKERRVCVQKMKKKVDTDNGFGSLPQFTFSGEA 110 >ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine max] Length = 1164 Score = 68.9 bits (167), Expect = 6e-10 Identities = 42/103 (40%), Positives = 58/103 (56%) Frame = +3 Query: 165 KFDKEKLESLQREGYTVVVPKKLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQ 344 K K+K E L R+ V ++ S IL+ F +S DEVY F+ LS +ER LVHQ++ + Sbjct: 9 KTGKKKGEPLFRQNPNVDEVTRICISQILEQFRASNDEVYKFDAGLSNQERALVHQMALK 68 Query: 345 MGLNCTFFGRGIKCKAFVHKTKKEVDTTKVLEILPHVTFSKES 473 MG +G G + + V K KK+VDT LP TFS E+ Sbjct: 69 MGFRSKSYGLGKERRVCVQKMKKKVDTDNGFGSLPPFTFSGEA 111 >ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1| predicted protein [Populus trichocarpa] Length = 1195 Score = 64.7 bits (156), Expect = 1e-08 Identities = 35/100 (35%), Positives = 59/100 (59%) Frame = +3 Query: 174 KEKLESLQREGYTVVVPKKLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQMGL 353 K + ++ Q++ V ++ S IL+ F ++ D+VY FE LS +R +VH++ ++MG+ Sbjct: 4 KNQRKAAQQQNPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKKMGM 63 Query: 354 NCTFFGRGIKCKAFVHKTKKEVDTTKVLEILPHVTFSKES 473 GRG + + V+K K++D K E L H+TFS ES Sbjct: 64 KSKSSGRGGQRRVSVYKNTKKLDDVKGKENLTHLTFSGES 103 >ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis vinifera] Length = 1231 Score = 62.4 bits (150), Expect = 5e-08 Identities = 33/84 (39%), Positives = 54/84 (64%) Frame = +3 Query: 228 KLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQMGLNCTFFGRGIKCKAFVHKT 407 +++ S LQ F + +EVY FE L+ ER +VH++ ++MG+ GRG + + V+KT Sbjct: 24 RIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRVSVYKT 83 Query: 408 KKEVDTTKVLEILPHVTFSKESNQ 479 KK+VDT K E P++ FS+E+ + Sbjct: 84 KKKVDTKKE-EGNPYLNFSEEAKE 106 >emb|CBI22072.3| unnamed protein product [Vitis vinifera] Length = 1190 Score = 62.4 bits (150), Expect = 5e-08 Identities = 33/84 (39%), Positives = 54/84 (64%) Frame = +3 Query: 228 KLQFSLILQNFLSSKDEVYNFEHELSLKERDLVHQLSQQMGLNCTFFGRGIKCKAFVHKT 407 +++ S LQ F + +EVY FE L+ ER +VH++ ++MG+ GRG + + V+KT Sbjct: 24 RIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRVSVYKT 83 Query: 408 KKEVDTTKVLEILPHVTFSKESNQ 479 KK+VDT K E P++ FS+E+ + Sbjct: 84 KKKVDTKKE-EGNPYLNFSEEAKE 106