BLASTX nr result

ID: Glycyrrhiza24_contig00018593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018593
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   406   e-111
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
emb|CBI39605.3| unnamed protein product [Vitis vinifera]              393   e-107
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi...   393   e-107
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi...   393   e-107

>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
            predicted protein [Populus trichocarpa]
          Length = 665

 Score =  406 bits (1043), Expect = e-111
 Identities = 195/288 (67%), Positives = 244/288 (84%)
 Frame = -1

Query: 865  KVSTWNAMIMGLSIHGRAEDAIELFTKMHGEEKRQKPNGVSFVGVLNACAHAGMVKRGLA 686
            +V TWNAMI GL +HGRAEDAIELF KM  ++++ +PNG++ +GVL+ACAH+GMV  GL 
Sbjct: 358  EVFTWNAMICGLGMHGRAEDAIELFFKM--QKQKFRPNGITLLGVLSACAHSGMVDEGLR 415

Query: 685  LLNSMKRVYGIEPEMEHFGCVVDLLGRAGLMEEAEKFIESMPVKPNAAVLGALLNACRIH 506
            + NSM+ VYGIEP MEH+GCVVDLLGRAGL+ EAE+ + SMP++P+AAV GALL ACR H
Sbjct: 416  IFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKH 475

Query: 505  GNVELGEKVGWVLLDMEPQNSGRYALLSNIYAKAGRWDDVTRVRKLMKERGIKTVPGSSM 326
            G+VELGE+VG +LL++EPQNSGRYALLSNIYA+AGRWDDV  VRKLMKERG+KT  G SM
Sbjct: 476  GDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISM 535

Query: 325  MEVGGRVHEFKMGDDSHPQKKEIYVMLERVMEKLRMEGYSPNTSVVSFDIEEEEKETALR 146
            ++  G VHEFKMGD SHPQ K IY+ML+ ++++L+MEG+SPNTS V FDIEEEEKE  L+
Sbjct: 536  IDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQ 595

Query: 145  LHSEKLALAFGLLHTEAGSTLRIVKNLRVCEDCHFAFKLASRIYGRTI 2
             HSEKLA+AFGL++T+ G+T+ +VKNLR+CEDCH AFKL S++Y R I
Sbjct: 596  YHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREI 643


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 666

 Score =  394 bits (1011), Expect = e-107
 Identities = 188/288 (65%), Positives = 237/288 (82%)
 Frame = -1

Query: 865  KVSTWNAMIMGLSIHGRAEDAIELFTKMHGEEKRQKPNGVSFVGVLNACAHAGMVKRGLA 686
            ++ TWNAMI GL+IHGRAEDA+ELF+K+  +E R KPNG++ VGVL ACAHAG V +GL 
Sbjct: 359  EIFTWNAMIGGLAIHGRAEDALELFSKL--QEGRMKPNGITLVGVLTACAHAGFVDKGLR 416

Query: 685  LLNSMKRVYGIEPEMEHFGCVVDLLGRAGLMEEAEKFIESMPVKPNAAVLGALLNACRIH 506
            +  +M+  YG++PE+EH+GC+VDLLGR+GL  EAE  I SMP+KPNAAV GALL ACRIH
Sbjct: 417  IFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIH 476

Query: 505  GNVELGEKVGWVLLDMEPQNSGRYALLSNIYAKAGRWDDVTRVRKLMKERGIKTVPGSSM 326
            GN +L E+VG +LL++EPQNSGRY LLSNIYAK GR+DDV+++RKLMK+RGIKTVPG S+
Sbjct: 477  GNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSI 536

Query: 325  MEVGGRVHEFKMGDDSHPQKKEIYVMLERVMEKLRMEGYSPNTSVVSFDIEEEEKETALR 146
            +++ G VHEFKMGD SHPQ KEIY  L+ + E+L+M G+SP+TS V FDI+EEEKETA+ 
Sbjct: 537  VDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVN 596

Query: 145  LHSEKLALAFGLLHTEAGSTLRIVKNLRVCEDCHFAFKLASRIYGRTI 2
             HSEKLA+AFGL++T  G  + IVKNLRVC+DCH A KL S+I+ R I
Sbjct: 597  YHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREI 644


>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  393 bits (1010), Expect = e-107
 Identities = 189/289 (65%), Positives = 240/289 (83%), Gaps = 1/289 (0%)
 Frame = -1

Query: 865  KVSTWNAMIMGLSIHGRAEDAIELFTKMHGEEKRQKPNGVSFVGVLNACAHAGMVKRGLA 686
            +VS+WNAMI GL++HGRAEDAI+LF+KM        PN ++FVGVLNACAH G+V++GL 
Sbjct: 319  EVSSWNAMIGGLAMHGRAEDAIDLFSKMD-----INPNEITFVGVLNACAHGGLVQKGLT 373

Query: 685  LLNSMKRVYGIEPEMEHFGCVVDLLGRAGLMEEAEKFIESMPVKPNAAVLGALLNACRIH 506
            + NSM++ YG+EP++EH+GC+VDLLGRAGL+ EAEK + S+P +P  AV GALL ACR H
Sbjct: 374  IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH 433

Query: 505  GNVELGEKVGWVLLDMEPQNSGRYALLSNIYAKAGRWDDVTRVRKLMKERGIKTVPGSSM 326
            GNVELGE+VG +LL++EPQNSGRY LLSNIYAKAGRW++V  VRKLMKERGIKT PG+S+
Sbjct: 434  GNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSI 493

Query: 325  MEVG-GRVHEFKMGDDSHPQKKEIYVMLERVMEKLRMEGYSPNTSVVSFDIEEEEKETAL 149
            +++G G VH+F +GD SHPQ K+IY ML++V E+L+MEGY P+ S V FDI+EEEKETA+
Sbjct: 494  IDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAV 553

Query: 148  RLHSEKLALAFGLLHTEAGSTLRIVKNLRVCEDCHFAFKLASRIYGRTI 2
              HSEKLA+ FGL++T  G+T+RIVKNLRVCEDCH A KL S++Y R I
Sbjct: 554  WQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREI 602


>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
            isoform 1 [Vitis vinifera]
          Length = 672

 Score =  393 bits (1010), Expect = e-107
 Identities = 189/289 (65%), Positives = 240/289 (83%), Gaps = 1/289 (0%)
 Frame = -1

Query: 865  KVSTWNAMIMGLSIHGRAEDAIELFTKMHGEEKRQKPNGVSFVGVLNACAHAGMVKRGLA 686
            +VS+WNAMI GL++HGRAEDAI+LF+KM        PN ++FVGVLNACAH G+V++GL 
Sbjct: 367  EVSSWNAMIGGLAMHGRAEDAIDLFSKMD-----INPNEITFVGVLNACAHGGLVQKGLT 421

Query: 685  LLNSMKRVYGIEPEMEHFGCVVDLLGRAGLMEEAEKFIESMPVKPNAAVLGALLNACRIH 506
            + NSM++ YG+EP++EH+GC+VDLLGRAGL+ EAEK + S+P +P  AV GALL ACR H
Sbjct: 422  IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH 481

Query: 505  GNVELGEKVGWVLLDMEPQNSGRYALLSNIYAKAGRWDDVTRVRKLMKERGIKTVPGSSM 326
            GNVELGE+VG +LL++EPQNSGRY LLSNIYAKAGRW++V  VRKLMKERGIKT PG+S+
Sbjct: 482  GNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSI 541

Query: 325  MEVG-GRVHEFKMGDDSHPQKKEIYVMLERVMEKLRMEGYSPNTSVVSFDIEEEEKETAL 149
            +++G G VH+F +GD SHPQ K+IY ML++V E+L+MEGY P+ S V FDI+EEEKETA+
Sbjct: 542  IDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAV 601

Query: 148  RLHSEKLALAFGLLHTEAGSTLRIVKNLRVCEDCHFAFKLASRIYGRTI 2
              HSEKLA+ FGL++T  G+T+RIVKNLRVCEDCH A KL S++Y R I
Sbjct: 602  WQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREI 650


>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 666

 Score =  393 bits (1009), Expect = e-107
 Identities = 188/288 (65%), Positives = 236/288 (81%)
 Frame = -1

Query: 865  KVSTWNAMIMGLSIHGRAEDAIELFTKMHGEEKRQKPNGVSFVGVLNACAHAGMVKRGLA 686
            ++ TWNAMI GL+IHGRAEDA+ELF+K+  +E R KPNG++ VGVL ACAHAG V +GL 
Sbjct: 359  EIFTWNAMIGGLAIHGRAEDALELFSKL--QEGRMKPNGITLVGVLTACAHAGFVDKGLR 416

Query: 685  LLNSMKRVYGIEPEMEHFGCVVDLLGRAGLMEEAEKFIESMPVKPNAAVLGALLNACRIH 506
            +  +M+  YG++PE+EH+GC+VDLLGR+GL  EAE  I SMP+KPNAAV GALL ACRIH
Sbjct: 417  IFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIH 476

Query: 505  GNVELGEKVGWVLLDMEPQNSGRYALLSNIYAKAGRWDDVTRVRKLMKERGIKTVPGSSM 326
            GN +L E+VG +LL++EPQNSGRY LLSNIYAK GR+DDV+++RKLMK RGIKTVPG S+
Sbjct: 477  GNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSI 536

Query: 325  MEVGGRVHEFKMGDDSHPQKKEIYVMLERVMEKLRMEGYSPNTSVVSFDIEEEEKETALR 146
            +++ G VHEFKMGD SHPQ KEIY  L+ + E+L+M G+SP+TS V FDI+EEEKETA+ 
Sbjct: 537  VDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVN 596

Query: 145  LHSEKLALAFGLLHTEAGSTLRIVKNLRVCEDCHFAFKLASRIYGRTI 2
             HSEKLA+AFGL++T  G  + IVKNLRVC+DCH A KL S+I+ R I
Sbjct: 597  YHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREI 644


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