BLASTX nr result

ID: Glycyrrhiza24_contig00018569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018569
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like...   271   6e-71
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...   244   5e-63
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   238   6e-61
ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi...   237   1e-60
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   225   3e-57

>ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max]
          Length = 522

 Score =  271 bits (692), Expect = 6e-71
 Identities = 135/170 (79%), Positives = 142/170 (83%), Gaps = 1/170 (0%)
 Frame = -3

Query: 508 PSEQPPYFLSEPINQPFPPPTTVRSDSFNFNDKALRVSPSXXXXXXXXXIVFFISGLLHL 329
           P EQPPYFLSEP N PFPP TTVRSDSF+ ND+AL+VSPS         IVFFISGLLHL
Sbjct: 5   PPEQPPYFLSEP-NPPFPPTTTVRSDSFSLNDRALKVSPSILLIIIILAIVFFISGLLHL 63

Query: 328 LVRFLWRPQSRDPDDYDNVTAXXXXXXXXXXXHDSGVDQSFIDTLPVFLYKAIIGLKN-P 152
           LVRFLWRPQ+R+PD+ DNVTA           HD+GVDQSFIDTLPVFLYKAIIGLK  P
Sbjct: 64  LVRFLWRPQTREPDELDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKKYP 123

Query: 151 FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 2
           FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP
Sbjct: 124 FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 173


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score =  244 bits (624), Expect = 5e-63
 Identities = 123/159 (77%), Positives = 132/159 (83%), Gaps = 2/159 (1%)
 Frame = -3

Query: 472 INQPFPP-PTTVRSDSFNFNDKALRVSPSXXXXXXXXXIVFFISGLLHLLVRFLWRPQSR 296
           I +P PP P TVRSDSF+FND+AL+VSPS         IVFFISGLLHLLVRFLWRPQ+R
Sbjct: 23  IPRPTPPFPPTVRSDSFSFNDRALKVSPSILLIIIILAIVFFISGLLHLLVRFLWRPQTR 82

Query: 295 DPDDYDNVTAXXXXXXXXXXXHDSGVDQSFIDTLPVFLYKAIIGLKN-PFDCAVCLCEFE 119
           +PD+ DNVTA           HD+GVDQSFIDTLPVFLYKAIIGLK  PFDCAVCLCEFE
Sbjct: 83  EPDELDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKKYPFDCAVCLCEFE 142

Query: 118 PEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 2
           PEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRA+LLP
Sbjct: 143 PEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRATLLP 181


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  238 bits (606), Expect = 6e-61
 Identities = 126/187 (67%), Positives = 135/187 (72%), Gaps = 7/187 (3%)
 Frame = -3

Query: 541 FLQGKGDTFLPPSEQPPYFLSEPINQPFPPPTTVR-------SDSFNFNDKALRVSPSXX 383
           FLQ K +T+L PS+QP YFLS+P      PP           SD FN N K   +SPS  
Sbjct: 5   FLQSKENTYLSPSQQP-YFLSQP------PPQQQNNNLDGSSSDGFNLNSK---ISPSVL 54

Query: 382 XXXXXXXIVFFISGLLHLLVRFLWRPQSRDPDDYDNVTAXXXXXXXXXXXHDSGVDQSFI 203
                  I+FF+SGLLHLLVRFL RP +RDPDD DNVTA           HD+GVDQSFI
Sbjct: 55  LIIIILAIIFFVSGLLHLLVRFLLRPPNRDPDDLDNVTALQGQLQQLFHLHDAGVDQSFI 114

Query: 202 DTLPVFLYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPL 23
           DTLPVF YKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPL
Sbjct: 115 DTLPVFHYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPL 174

Query: 22  CRASLLP 2
           CR SLLP
Sbjct: 175 CRGSLLP 181


>ref|XP_003610233.1| RING finger protein [Medicago truncatula]
           gi|355511288|gb|AES92430.1| RING finger protein
           [Medicago truncatula]
          Length = 511

 Score =  237 bits (604), Expect = 1e-60
 Identities = 129/189 (68%), Positives = 143/189 (75%), Gaps = 9/189 (4%)
 Frame = -3

Query: 544 SFLQGKGD-TFLPPS--EQPPYFLSEPINQPFPPPT--TVRSDS---FNFNDKALRVSPS 389
           SF   +GD TF+ PS  EQPPY+     + PFPP T  T+RS++   F+FN+  L+VSP 
Sbjct: 4   SFEPFQGDNTFMIPSPLEQPPYYFQP--HPPFPPITVSTLRSNNNSNFSFNNSTLKVSPG 61

Query: 388 XXXXXXXXXIVFFISGLLHLLVRFLWRPQSRDPDDYDNVTAXXXXXXXXXXXHDSGVDQS 209
                    IVFFISGLLHLLVRFLWRPQSRDPD+ D+VTA           HD+GVDQS
Sbjct: 62  ILIIITILAIVFFISGLLHLLVRFLWRPQSRDPDELDDVTALQGQLQQLFHLHDAGVDQS 121

Query: 208 FIDTLPVFLYKAIIGLK-NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHST 32
           FIDTLPVFLYK IIGLK NPFDCAVCLCEFE EDKLRLLPKCSHAFHMECIDTWLLSHST
Sbjct: 122 FIDTLPVFLYKTIIGLKVNPFDCAVCLCEFEHEDKLRLLPKCSHAFHMECIDTWLLSHST 181

Query: 31  CPLCRASLL 5
           CPLCRA+LL
Sbjct: 182 CPLCRANLL 190


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  225 bits (574), Expect = 3e-57
 Identities = 115/172 (66%), Positives = 126/172 (73%)
 Frame = -3

Query: 517 FLPPSEQPPYFLSEPINQPFPPPTTVRSDSFNFNDKALRVSPSXXXXXXXXXIVFFISGL 338
           F  PSE P +     ++QP PPP   +S  +N N K   VSPS         I+FF+SGL
Sbjct: 58  FNSPSESPAF-----LSQPPPPPANFQSGDYNLNSK---VSPSILLIIIILAIIFFVSGL 109

Query: 337 LHLLVRFLWRPQSRDPDDYDNVTAXXXXXXXXXXXHDSGVDQSFIDTLPVFLYKAIIGLK 158
           LHLLVRFL R  +R+P+D DNVTA           HD+GVDQSFIDTLPVFLYKAIIG K
Sbjct: 110 LHLLVRFLLRQPNREPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGAK 169

Query: 157 NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 2
           NPFDCAVCLCEFE EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP
Sbjct: 170 NPFDCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 221


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