BLASTX nr result

ID: Glycyrrhiza24_contig00018541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018541
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloro...   276   4e-72
ref|XP_003544871.1| PREDICTED: uncharacterized protein LOC100785...   168   2e-39
ref|NP_001239978.1| uncharacterized protein LOC100789822 [Glycin...   167   4e-39
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...   150   4e-34
ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|2...   130   5e-28

>ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
            max]
          Length = 544

 Score =  276 bits (707), Expect = 4e-72
 Identities = 158/255 (61%), Positives = 170/255 (66%), Gaps = 3/255 (1%)
 Frame = +1

Query: 58   PGGSAQTKHYYXXXXXXXXXXXXXXXXXV--MGDVDELRVISNAKVSPATTELFYGAKVL 231
            PGGSAQTKHYY                    MG+VDELR ISNAKVSPATTELFYGAKVL
Sbjct: 289  PGGSAQTKHYYSNWHRRRRSFDRSNSRRKSSMGEVDELRAISNAKVSPATTELFYGAKVL 348

Query: 232  ITEKDLRDANLKPKNNNVHSDCRMGSASKD-ACDVGIGGDQKGLNKFQKLGRLWNKLGLV 408
            ITE DLRDANLKP N+ V SD  MGSASKD ACDV IG DQKGLN+F K GRLW+KLGL+
Sbjct: 349  ITENDLRDANLKPINS-VQSDNVMGSASKDDACDVAIGDDQKGLNRFHKWGRLWSKLGLM 407

Query: 409  QRRREDKLXXXXXXXXXXXDVVNKPIAESWQKLRRVVNGQGSESVSQKLIRSYSVSCRNP 588
            Q+RRED+L           DVV+KPIAESWQKLRRVVNGQ SESVSQKLIRSYSVSCR+ 
Sbjct: 408  QKRREDRLEEGEYAGGGGGDVVDKPIAESWQKLRRVVNGQVSESVSQKLIRSYSVSCRDS 467

Query: 589  CRTPGLVNGIGGPETKGSVLNGRQELMLPXXXXXXXXXXXXDTGLLRFYLTPXXXXXXXX 768
             RT GLV+G  G ETKG V NGRQ+ ML             D GLLRFYLTP        
Sbjct: 468  SRTAGLVSGFVGSETKGHVFNGRQKFMLQRNRSVRYSPSNVDNGLLRFYLTPLKSYRRSR 527

Query: 769  XXXXXXXDLNSTARN 813
                     N TAR+
Sbjct: 528  SGKSSLKSSNPTARS 542


>ref|XP_003544871.1| PREDICTED: uncharacterized protein LOC100785680 [Glycine max]
          Length = 271

 Score =  168 bits (426), Expect = 2e-39
 Identities = 110/232 (47%), Positives = 134/232 (57%), Gaps = 7/232 (3%)
 Frame = +1

Query: 145 MGDVDELRVISNA----KVSPATTELFYGAKVLITEKDLRDANLKPKNNNV-HSDCRMGS 309
           + ++DEL+ +SN     KVSPAT   FYGAK+LITEK+L D+ ++  + +V  SDC + S
Sbjct: 50  IAELDELKSMSNVNANVKVSPAT---FYGAKLLITEKELMDSYVRSSSGDVVQSDCVVES 106

Query: 310 ASKDACDVGIGGDQKGLNKFQKLGRLWNKLGLVQ--RRREDKLXXXXXXXXXXXDVVNKP 483
            SKD  DV     QKG  K QK   +WNKLGLVQ   R+ED++           D   KP
Sbjct: 107 DSKDVADVATR--QKGSKKLQKWRGVWNKLGLVQGTERKEDRVREEEGDSGVEVD---KP 161

Query: 484 IAESWQKLRRVVNGQGSESVSQKLIRSYSVSCRNPCRTPGLVNGIGGPETKGSVLNGRQE 663
           +AES ++LRRVVN Q SE V QKL+RSYSVSCR+PC T G        E KGS LNGRQE
Sbjct: 162 LAESLERLRRVVNVQASEPVGQKLMRSYSVSCRSPCGTDGYAT--EESENKGSALNGRQE 219

Query: 664 LMLPXXXXXXXXXXXXDTGLLRFYLTPXXXXXXXXXXXXXXXDLNSTARNSL 819
           LM              DTGLLRFYLTP               DL+S AR+ L
Sbjct: 220 LMFQRNRSVRYSPNNPDTGLLRFYLTPTKSYKRSKVGRSRVKDLHSAARSGL 271


>ref|NP_001239978.1| uncharacterized protein LOC100789822 [Glycine max]
           gi|255647416|gb|ACU24173.1| unknown [Glycine max]
          Length = 276

 Score =  167 bits (423), Expect = 4e-39
 Identities = 109/241 (45%), Positives = 135/241 (56%), Gaps = 16/241 (6%)
 Frame = +1

Query: 145 MGDVDELRVISNA--------------KVSPATTELFYGAKVLITEKDLRDANLKPKNNN 282
           + ++DEL+ +SNA              KVSPAT   FYGAK+LITEK+L D+ ++  ++ 
Sbjct: 45  IAELDELKSMSNANANANVNANAKVSPKVSPAT---FYGAKLLITEKELMDSYVRSSSDV 101

Query: 283 VHSDCRMGSASKDACDVGIGGDQKGLNKFQKLGRLWNKLGLVQR--RREDKLXXXXXXXX 456
           V  DC + S SK   DV     QKG  K QK   +WNKLGLVQR  R+ED++        
Sbjct: 102 VEPDCVVESDSKGVADVATR--QKGSKKLQKWRGIWNKLGLVQRTERKEDRMGEEKGDSG 159

Query: 457 XXXDVVNKPIAESWQKLRRVVNGQGSESVSQKLIRSYSVSCRNPCRTPGLVNGIGGPETK 636
              +V  KP+AES ++LRRVVN Q SE V QKL+RSYSVSCR+PCRT G        E+K
Sbjct: 160 VEVEV-EKPLAESLERLRRVVNVQASEPVGQKLMRSYSVSCRSPCRTDGFTE---ESESK 215

Query: 637 GSVLNGRQELMLPXXXXXXXXXXXXDTGLLRFYLTPXXXXXXXXXXXXXXXDLNSTARNS 816
           GS LN RQE M              DTGLLRFYLTP               DL+S AR+ 
Sbjct: 216 GSALNVRQEFMFQRNRSVRYSPNNPDTGLLRFYLTPTKSYKRSKAGRSSVKDLHSAARSG 275

Query: 817 L 819
           L
Sbjct: 276 L 276


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
            sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
            UPF0503 protein At3g09070, chloroplastic-like [Cucumis
            sativus]
          Length = 575

 Score =  150 bits (380), Expect = 4e-34
 Identities = 99/235 (42%), Positives = 125/235 (53%), Gaps = 6/235 (2%)
 Frame = +1

Query: 58   PGGSAQTKHYYXXXXXXXXXXXXXXXXX-----VMGDVDELRVISNAKVSPATTELFYGA 222
            PGGSAQTK YY                        GD DEL++ISNAKVSPATTELFYGA
Sbjct: 322  PGGSAQTKDYYMDSLSSMRRRKSFDRSCSHRKGASGDFDELKLISNAKVSPATTELFYGA 381

Query: 223  KVLITEKDLRDANLKPKNNNVHSDCRMGSASKDACDVGIGGDQKGLNKFQKLGRLWNKLG 402
            KVLITEKDL  +  +PK             SKD+       D+K   K  +  ++ + LG
Sbjct: 382  KVLITEKDLNSS--RPKTTGDGDLSGTDVTSKDSVPDAPVIDRKTFKKVHRWRKVLSVLG 439

Query: 403  LVQRRREDKLXXXXXXXXXXXDVVNKPIAESWQKLRRVVNGQGSESVSQKLIRSYSVSCR 582
            +VQ+R  +             +VV++P+ ESW+KLRRV NG+ +  VSQKLIRSYSVSCR
Sbjct: 440  MVQKRNGES-KSDDEESSVGGNVVDRPVVESWEKLRRVANGEANSCVSQKLIRSYSVSCR 498

Query: 583  NPCRTPGLVNGIGGPETKGSVLNGRQELMLPXXXXXXXXXXXXDT-GLLRFYLTP 744
            +P +  G     GG ++K +V   R +  L             D  GLLRFYLTP
Sbjct: 499  DPSKLAGF---NGGNDSKLNVTRWRDDFTLQRNRSVRYSPNNFDNGGLLRFYLTP 550


>ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|222850533|gb|EEE88080.1|
            predicted protein [Populus trichocarpa]
          Length = 552

 Score =  130 bits (327), Expect = 5e-28
 Identities = 90/257 (35%), Positives = 127/257 (49%), Gaps = 3/257 (1%)
 Frame = +1

Query: 58   PGGSAQTKHYYXXXXXXXXXXXXXXXXXVMGDVDELRVISNAKVSPATTELFYGAKVLIT 237
            PGG+  T +YY                  +GD +E + +SNAKVSP T  LF+GAK+L+T
Sbjct: 304  PGGTMLTMNYYSDRRRKSFDRSGSNRRVGLGD-EEFKSMSNAKVSPETVGLFHGAKLLVT 362

Query: 238  EKDLRDANLKPKNNNVHSDCRMGSASKDACDVGIGGDQKGLNKFQKLGR---LWNKLGLV 408
            EK+LRD+N     +  H +    + SKD   +  GG +K   KF+K  +   +WN  GL+
Sbjct: 363  EKELRDSNWYSLKD--HREENADAVSKDVSSITGGGVRKKGFKFKKSHKWYGVWNIWGLM 420

Query: 409  QRRREDKLXXXXXXXXXXXDVVNKPIAESWQKLRRVVNGQGSESVSQKLIRSYSVSCRNP 588
            QR  + K            + V+ PI ESWQ L  V +G+ +  V+ KLIRSY+VS R+ 
Sbjct: 421  QRSSQSK--CGDEESRVSGNAVDGPIPESWQNLSGVADGEANRIVNPKLIRSYTVSARDS 478

Query: 589  CRTPGLVNGIGGPETKGSVLNGRQELMLPXXXXXXXXXXXXDTGLLRFYLTPXXXXXXXX 768
            CR     N   G E+K + +   +EL+L             D GLLRFYL+P        
Sbjct: 479  CRMACSTN---GAESKANDIKRGEELLLQRNRSTRYSPNNLDNGLLRFYLSPLRSYGRSK 535

Query: 769  XXXXXXXDLNSTARNSL 819
                   + NS +RN L
Sbjct: 536  SGKSRLKNTNSMSRNVL 552


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