BLASTX nr result

ID: Glycyrrhiza24_contig00018528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018528
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543637.1| PREDICTED: golgin candidate 5-like [Glycine ...   333   5e-89
gb|ABD32289.1| tRNA-binding arm; t-snare [Medicago truncatula]        326   6e-87
ref|XP_003597734.1| Golgin candidate [Medicago truncatula] gi|35...   326   6e-87
ref|XP_003546463.1| PREDICTED: golgin candidate 5-like [Glycine ...   320   5e-85
ref|XP_002303293.1| predicted protein [Populus trichocarpa] gi|2...   131   3e-28

>ref|XP_003543637.1| PREDICTED: golgin candidate 5-like [Glycine max]
          Length = 989

 Score =  333 bits (853), Expect = 5e-89
 Identities = 168/240 (70%), Positives = 184/240 (76%)
 Frame = +2

Query: 230 MAWFNAKNAWGNFPDLAGAVNKLQESVKNIEKNFDTALGFEEKAESSNEAAGSWPIPADR 409
           MAWF+ KN WGNFPDLAGAVNKLQESVKNIEKNFD+ALGFEEK ESSNE AGSWPIPADR
Sbjct: 1   MAWFSGKNTWGNFPDLAGAVNKLQESVKNIEKNFDSALGFEEKGESSNEDAGSWPIPADR 60

Query: 410 KALFNPVLSLMGNKGXXXXXXXXXXXXXXPQGSEIERSVEKPESLDHIPVAEGKEAFETD 589
           K LFNPV+S MGNK                Q SE+E+S+E+PESLDH  VAEG  A ETD
Sbjct: 61  KTLFNPVISFMGNKSEETTEEMSEKDESSQQDSEMEKSLEQPESLDHTSVAEGSNALETD 120

Query: 590 KTVHVEAEETTIQEENKVHKDEEDGEHTESADETTTQNLDHGKDEHQLPETPVELPESPI 769
            TVH+EAEE T +EENKV K+EEDGEHTES D T  QNLDHGK+E+ L E PVELPESP+
Sbjct: 121 NTVHMEAEENTTKEENKVLKEEEDGEHTESVDGTVAQNLDHGKEENHLLELPVELPESPV 180

Query: 770 EKFESLDSVDSPQEKEITEVGTLESPVMMQPMSSNLGDNEVEGSTSELGESHGISDVHEN 949
           EKFES DSV+  QEKEI + GT  SPV +Q M SNLGDN VEG T E  ESH ISD HEN
Sbjct: 181 EKFESSDSVEHSQEKEIADPGTSGSPVSVQFMPSNLGDNVVEGITRESDESHDISDGHEN 240


>gb|ABD32289.1| tRNA-binding arm; t-snare [Medicago truncatula]
          Length = 992

 Score =  326 bits (835), Expect = 6e-87
 Identities = 173/249 (69%), Positives = 191/249 (76%), Gaps = 8/249 (3%)
 Frame = +2

Query: 230 MAWFNAKNAWGNFPDLAGAVNKLQESVKNIEKNFDTALGFEEK-AESSN-----EAAGSW 391
           MAWFNAKNAWGNFPDLAGAVNKLQESVK+IEKNFD ALGFEEK  ESSN     E++GSW
Sbjct: 1   MAWFNAKNAWGNFPDLAGAVNKLQESVKSIEKNFDNALGFEEKDGESSNNEQASESSGSW 60

Query: 392 PIPADRKALFNPVLSLMGNKGXXXXXXXXXXXXXXPQGSEIERSVEKPESLDHIPVAEGK 571
           PIP D KALFNPVL+ MGNKG                 SE E + EKPESLDH+PVAEGK
Sbjct: 61  PIPTDGKALFNPVLAFMGNKGEEDSEETSENIESSKLESEPEMAEEKPESLDHVPVAEGK 120

Query: 572 EAFETDKTVHVEAEETTIQEENKVHKDEEDGEHTESADETTTQNLDHGKDE-HQLPETPV 748
           E  ETDK  +VEAEE T+QEENKVH+ EEDGEH ES D TT Q+LDH KDE  QLPE PV
Sbjct: 121 EVIETDKRDNVEAEEITVQEENKVHETEEDGEHVESVDGTTVQDLDHRKDEQQQLPEMPV 180

Query: 749 ELPESPIEKFESLDSVDSPQEKEITEVGTLESPVM-MQPMSSNLGDNEVEGSTSELGESH 925
           ELPESPI+K E+ DS+ + +EKEI EVGTLESPVM  QPM SN+ D+ VEGSTSELGES 
Sbjct: 181 ELPESPIQKSENSDSISNSEEKEIAEVGTLESPVMTQQPMVSNIVDDVVEGSTSELGESR 240

Query: 926 GISDVHENI 952
           G SDVH+ I
Sbjct: 241 GTSDVHDTI 249


>ref|XP_003597734.1| Golgin candidate [Medicago truncatula] gi|355486782|gb|AES67985.1|
           Golgin candidate [Medicago truncatula]
          Length = 1101

 Score =  326 bits (835), Expect = 6e-87
 Identities = 173/249 (69%), Positives = 191/249 (76%), Gaps = 8/249 (3%)
 Frame = +2

Query: 230 MAWFNAKNAWGNFPDLAGAVNKLQESVKNIEKNFDTALGFEEK-AESSN-----EAAGSW 391
           MAWFNAKNAWGNFPDLAGAVNKLQESVK+IEKNFD ALGFEEK  ESSN     E++GSW
Sbjct: 1   MAWFNAKNAWGNFPDLAGAVNKLQESVKSIEKNFDNALGFEEKDGESSNNEQASESSGSW 60

Query: 392 PIPADRKALFNPVLSLMGNKGXXXXXXXXXXXXXXPQGSEIERSVEKPESLDHIPVAEGK 571
           PIP D KALFNPVL+ MGNKG                 SE E + EKPESLDH+PVAEGK
Sbjct: 61  PIPTDGKALFNPVLAFMGNKGEEDSEETSENIESSKLESEPEMAEEKPESLDHVPVAEGK 120

Query: 572 EAFETDKTVHVEAEETTIQEENKVHKDEEDGEHTESADETTTQNLDHGKDE-HQLPETPV 748
           E  ETDK  +VEAEE T+QEENKVH+ EEDGEH ES D TT Q+LDH KDE  QLPE PV
Sbjct: 121 EVIETDKRDNVEAEEITVQEENKVHETEEDGEHVESVDGTTVQDLDHRKDEQQQLPEMPV 180

Query: 749 ELPESPIEKFESLDSVDSPQEKEITEVGTLESPVM-MQPMSSNLGDNEVEGSTSELGESH 925
           ELPESPI+K E+ DS+ + +EKEI EVGTLESPVM  QPM SN+ D+ VEGSTSELGES 
Sbjct: 181 ELPESPIQKSENSDSISNSEEKEIAEVGTLESPVMTQQPMVSNIVDDVVEGSTSELGESR 240

Query: 926 GISDVHENI 952
           G SDVH+ I
Sbjct: 241 GTSDVHDTI 249


>ref|XP_003546463.1| PREDICTED: golgin candidate 5-like [Glycine max]
          Length = 988

 Score =  320 bits (819), Expect = 5e-85
 Identities = 164/240 (68%), Positives = 181/240 (75%)
 Frame = +2

Query: 230 MAWFNAKNAWGNFPDLAGAVNKLQESVKNIEKNFDTALGFEEKAESSNEAAGSWPIPADR 409
           MAWF+ KN WGNFPDLAGAVNKLQESVKNIEKNFD+ALGFEEK ESSNE AGSWPIPADR
Sbjct: 1   MAWFSGKNTWGNFPDLAGAVNKLQESVKNIEKNFDSALGFEEKGESSNEDAGSWPIPADR 60

Query: 410 KALFNPVLSLMGNKGXXXXXXXXXXXXXXPQGSEIERSVEKPESLDHIPVAEGKEAFETD 589
           K LFNPV+S M NK                Q SE E+S EKP+SLDH PVAEG +  ETD
Sbjct: 61  KTLFNPVMSFMANKSEETTEEMSQKDEYSQQDSETEKSPEKPKSLDHTPVAEGNDTLETD 120

Query: 590 KTVHVEAEETTIQEENKVHKDEEDGEHTESADETTTQNLDHGKDEHQLPETPVELPESPI 769
            T+H+E EE T +EENKV K EEDGEHTESAD T  QNLDHGK+E+ L E PVELPESP+
Sbjct: 121 NTMHMEPEENTTKEENKVVK-EEDGEHTESADGTVAQNLDHGKEENHLLELPVELPESPV 179

Query: 770 EKFESLDSVDSPQEKEITEVGTLESPVMMQPMSSNLGDNEVEGSTSELGESHGISDVHEN 949
           EK ES DSV+  QEKEI + G+  S V +Q M SNLGDN VEG T+E GESH ISD HEN
Sbjct: 180 EKLESSDSVEHSQEKEIADPGSSGSLVSVQFMPSNLGDNVVEGVTTESGESHDISDGHEN 239


>ref|XP_002303293.1| predicted protein [Populus trichocarpa] gi|222840725|gb|EEE78272.1|
           predicted protein [Populus trichocarpa]
          Length = 975

 Score =  131 bits (329), Expect = 3e-28
 Identities = 93/241 (38%), Positives = 124/241 (51%), Gaps = 6/241 (2%)
 Frame = +2

Query: 230 MAWFNAKNAWGNFPDLAGAVNKLQESVKNIEKNFDTALGFEEKAESSN--EAAGSWPIPA 403
           MAWF+ K + GNFPDLAGAVNKL ESVKNIEKNFDTALGFE+K++SS+  EA+G W    
Sbjct: 1   MAWFSGKVSLGNFPDLAGAVNKLSESVKNIEKNFDTALGFEDKSDSSSTTEASGLW---- 56

Query: 404 DRKALFNPVLSLMGNKGXXXXXXXXXXXXXXPQGSEIERSVEKPESLDHIPVAEGKEAFE 583
                  PV+S MGNK                     + S  K  S   +   E KE+  
Sbjct: 57  -------PVMSFMGNKSE----------------DSTDESSGKTVSPQKLSTVEEKESQN 93

Query: 584 TDKTVHVEAEETTIQEENKVHKDEEDGEHTESADETTTQNLDHGK----DEHQLPETPVE 751
           +D       ++TT  EEN++ + ++D EH E A++      D GK     E Q     VE
Sbjct: 94  SD------TQQTTSAEENQMLERKKDAEHPEIAEKKDDVISDTGKAELESEIQSETKAVE 147

Query: 752 LPESPIEKFESLDSVDSPQEKEITEVGTLESPVMMQPMSSNLGDNEVEGSTSELGESHGI 931
            PE  +   +  +SVD  Q KEI+E G  E+   ++  S     +EVE  +    ESH +
Sbjct: 148 PPEPVVHDVKVPESVDDVQGKEISEEGCAENLDTLEVRSEASRVDEVEAPSILHDESHNV 207

Query: 932 S 934
           S
Sbjct: 208 S 208


Top