BLASTX nr result

ID: Glycyrrhiza24_contig00018526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018526
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523752.1| PREDICTED: protein cereblon-like [Glycine max]    371   e-101
ref|XP_003588430.1| Protein cereblon [Medicago truncatula] gi|35...   347   2e-93
ref|XP_003588429.1| Protein cereblon [Medicago truncatula] gi|35...   347   2e-93
ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|2...   328   6e-88
ref|XP_004164765.1| PREDICTED: LOW QUALITY PROTEIN: protein cere...   323   3e-86

>ref|XP_003523752.1| PREDICTED: protein cereblon-like [Glycine max]
          Length = 543

 Score =  371 bits (953), Expect = e-101
 Identities = 181/222 (81%), Positives = 200/222 (90%)
 Frame = +2

Query: 5   CSTSGKQSSKEELNRCYKNIHTHPSHKISKAFLPHWVYRMYDSYWLAQRAADMWKQIVGV 184
           CSTSGKQSSKEEL+RC KNI  +PS+KISKAF PHW Y+M+DSY LAQRAADMWK+IVG+
Sbjct: 323 CSTSGKQSSKEELSRC-KNICAYPSYKISKAFWPHWAYQMFDSYSLAQRAADMWKRIVGM 381

Query: 185 PSMDSLIQKPDVLSFHIASKIPVSESTRQELLDINGIAYRLRREIELLDSIDLIRCKRCQ 364
           P MDSLI+KPD+LSFHIASKIPVSESTRQELLDI+GIAYRLRREIELL+SIDLIRCK C+
Sbjct: 382 PDMDSLIKKPDILSFHIASKIPVSESTRQELLDIDGIAYRLRREIELLESIDLIRCKSCE 441

Query: 365 TIIAKRSDMMVMSSEGPLGAYVNPDGYVHEIMTLDKANGLDLIGPAVTEYSWFPGYAWTI 544
           TIIAKRSDM+VMSSEGPL AYVNP GYVHEIMTL KANGL L+G A T+YSWFPGYAWTI
Sbjct: 442 TIIAKRSDMLVMSSEGPLSAYVNPGGYVHEIMTLYKANGLALVGSAATDYSWFPGYAWTI 501

Query: 545 AKCATCRTQMGWLFTATNKKLTPVAFWGIRSSQVAEERLRNL 670
           A CATC+TQMGWLFTA NK+L P  FWGIRS Q+AEE  +NL
Sbjct: 502 ATCATCKTQMGWLFTARNKQLKPSYFWGIRSCQLAEEIRQNL 543


>ref|XP_003588430.1| Protein cereblon [Medicago truncatula] gi|355477478|gb|AES58681.1|
           Protein cereblon [Medicago truncatula]
          Length = 396

 Score =  347 bits (889), Expect = 2e-93
 Identities = 170/219 (77%), Positives = 191/219 (87%), Gaps = 1/219 (0%)
 Frame = +2

Query: 2   NCSTSGKQSS-KEELNRCYKNIHTHPSHKISKAFLPHWVYRMYDSYWLAQRAADMWKQIV 178
           +CSTSGKQSS +E LN C KN   + S + S+AFLP WVYRM+DSY LAQ+AADMWKQIV
Sbjct: 176 SCSTSGKQSSIREGLNWCSKNRDLYSSRRTSRAFLPGWVYRMFDSYLLAQKAADMWKQIV 235

Query: 179 GVPSMDSLIQKPDVLSFHIASKIPVSESTRQELLDINGIAYRLRREIELLDSIDLIRCKR 358
           G PSMD+L++KPDVLSF IASKIPVSESTRQELLDI+GI+YRLRREIELL+SIDLIRCK 
Sbjct: 236 GAPSMDALVKKPDVLSFSIASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKI 295

Query: 359 CQTIIAKRSDMMVMSSEGPLGAYVNPDGYVHEIMTLDKANGLDLIGPAVTEYSWFPGYAW 538
           CQ IIAKRSDM+VMSSEGP+GAYVN  GYVHEI TL KANGL L GPA+T+YSWFPGYAW
Sbjct: 296 CQIIIAKRSDMLVMSSEGPVGAYVNATGYVHEITTLYKANGLALTGPALTKYSWFPGYAW 355

Query: 539 TIAKCATCRTQMGWLFTATNKKLTPVAFWGIRSSQVAEE 655
           TIA CATC T MGWLFTATN+KL P +FWGIR+ QVA+E
Sbjct: 356 TIANCATCETHMGWLFTATNRKLKPKSFWGIRNCQVADE 394


>ref|XP_003588429.1| Protein cereblon [Medicago truncatula] gi|355477477|gb|AES58680.1|
           Protein cereblon [Medicago truncatula]
          Length = 556

 Score =  347 bits (889), Expect = 2e-93
 Identities = 170/219 (77%), Positives = 191/219 (87%), Gaps = 1/219 (0%)
 Frame = +2

Query: 2   NCSTSGKQSS-KEELNRCYKNIHTHPSHKISKAFLPHWVYRMYDSYWLAQRAADMWKQIV 178
           +CSTSGKQSS +E LN C KN   + S + S+AFLP WVYRM+DSY LAQ+AADMWKQIV
Sbjct: 336 SCSTSGKQSSIREGLNWCSKNRDLYSSRRTSRAFLPGWVYRMFDSYLLAQKAADMWKQIV 395

Query: 179 GVPSMDSLIQKPDVLSFHIASKIPVSESTRQELLDINGIAYRLRREIELLDSIDLIRCKR 358
           G PSMD+L++KPDVLSF IASKIPVSESTRQELLDI+GI+YRLRREIELL+SIDLIRCK 
Sbjct: 396 GAPSMDALVKKPDVLSFSIASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKI 455

Query: 359 CQTIIAKRSDMMVMSSEGPLGAYVNPDGYVHEIMTLDKANGLDLIGPAVTEYSWFPGYAW 538
           CQ IIAKRSDM+VMSSEGP+GAYVN  GYVHEI TL KANGL L GPA+T+YSWFPGYAW
Sbjct: 456 CQIIIAKRSDMLVMSSEGPVGAYVNATGYVHEITTLYKANGLALTGPALTKYSWFPGYAW 515

Query: 539 TIAKCATCRTQMGWLFTATNKKLTPVAFWGIRSSQVAEE 655
           TIA CATC T MGWLFTATN+KL P +FWGIR+ QVA+E
Sbjct: 516 TIANCATCETHMGWLFTATNRKLKPKSFWGIRNCQVADE 554


>ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|222854569|gb|EEE92116.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score =  328 bits (842), Expect = 6e-88
 Identities = 153/207 (73%), Positives = 179/207 (86%)
 Frame = +2

Query: 35  EELNRCYKNIHTHPSHKISKAFLPHWVYRMYDSYWLAQRAADMWKQIVGVPSMDSLIQKP 214
           E   RC+KN   +  H++ +AF PHWVYRMYDSY LA+RAADMWKQIVG PSMD L++KP
Sbjct: 319 EGSKRCWKNTDLNHFHRVPRAFWPHWVYRMYDSYCLAERAADMWKQIVGAPSMDGLVRKP 378

Query: 215 DVLSFHIASKIPVSESTRQELLDINGIAYRLRREIELLDSIDLIRCKRCQTIIAKRSDMM 394
           D+LSF+IASKIPVSE TRQELL+I+GI+YRLRREI LL+S DL++CK C+T+IA+RSDM+
Sbjct: 379 DLLSFYIASKIPVSEETRQELLEIDGISYRLRREIGLLESFDLVQCKTCKTVIAQRSDML 438

Query: 395 VMSSEGPLGAYVNPDGYVHEIMTLDKANGLDLIGPAVTEYSWFPGYAWTIAKCATCRTQM 574
           VMS+EGPLGAYVN  GYVHEIMTL KANGL LIG A  EYSWFPGYAWTIA+CA+C TQM
Sbjct: 439 VMSTEGPLGAYVNSHGYVHEIMTLQKANGLALIGRATVEYSWFPGYAWTIAECASCETQM 498

Query: 575 GWLFTATNKKLTPVAFWGIRSSQVAEE 655
           GWLFTAT KKL P +FWGIRSSQVA++
Sbjct: 499 GWLFTATKKKLKPQSFWGIRSSQVADD 525


>ref|XP_004164765.1| PREDICTED: LOW QUALITY PROTEIN: protein cereblon-like [Cucumis
           sativus]
          Length = 546

 Score =  323 bits (827), Expect = 3e-86
 Identities = 152/216 (70%), Positives = 183/216 (84%), Gaps = 1/216 (0%)
 Frame = +2

Query: 8   STSGKQSSK-EELNRCYKNIHTHPSHKISKAFLPHWVYRMYDSYWLAQRAADMWKQIVGV 184
           STS ++SS+ +EL RC +N   +P H++SKAF P+WVY MYDSY LAQ+AA MWKQIVG 
Sbjct: 328 STSARESSESKELKRCRRNSSFNPMHRVSKAFWPYWVYSMYDSYCLAQKAAAMWKQIVGA 387

Query: 185 PSMDSLIQKPDVLSFHIASKIPVSESTRQELLDINGIAYRLRREIELLDSIDLIRCKRCQ 364
           P+MD  ++ PD+LSF+IASKIPVSESTRQELL+I+GI+YRLRREIELL SID+I+CK C+
Sbjct: 388 PNMDGFVKNPDILSFYIASKIPVSESTRQELLEIDGISYRLRREIELLKSIDIIQCKNCK 447

Query: 365 TIIAKRSDMMVMSSEGPLGAYVNPDGYVHEIMTLDKANGLDLIGPAVTEYSWFPGYAWTI 544
           T+IAK SDM+VM +EGP GAYVNP GYVHEIMTL +ANGL L G A TEYSWFPGYAWTI
Sbjct: 448 TVIAKHSDMLVMPNEGPFGAYVNPHGYVHEIMTLYRANGLALRGRAQTEYSWFPGYAWTI 507

Query: 545 AKCATCRTQMGWLFTATNKKLTPVAFWGIRSSQVAE 652
           + CATC TQ+GWLFTATN+ L P +FWGIR SQ+A+
Sbjct: 508 SICATCETQLGWLFTATNRNLKPXSFWGIRCSQLAD 543


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