BLASTX nr result

ID: Glycyrrhiza24_contig00018525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018525
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588430.1| Protein cereblon [Medicago truncatula] gi|35...   245   2e-63
ref|XP_003588429.1| Protein cereblon [Medicago truncatula] gi|35...   245   2e-63
ref|XP_003523752.1| PREDICTED: protein cereblon-like [Glycine max]    223   2e-56
ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|2...   199   3e-49
ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|2...   198   4e-49

>ref|XP_003588430.1| Protein cereblon [Medicago truncatula] gi|355477478|gb|AES58681.1|
           Protein cereblon [Medicago truncatula]
          Length = 396

 Score =  245 bits (626), Expect = 2e-63
 Identities = 126/141 (89%), Positives = 130/141 (92%)
 Frame = +2

Query: 2   NCSTSGKQSSIREGLNWHCKNIVPYSSRRISRAFWPHWVYRMFDSYWLAQRAADMWKQIV 181
           +CSTSGKQSSIREGLNW  KN   YSSRR SRAF P WVYRMFDSY LAQ+AADMWKQIV
Sbjct: 176 SCSTSGKQSSIREGLNWCSKNRDLYSSRRTSRAFLPGWVYRMFDSYLLAQKAADMWKQIV 235

Query: 182 GAPSMDGLVKKPDVLSFYIASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKI 361
           GAPSMD LVKKPDVLSF IASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKI
Sbjct: 236 GAPSMDALVKKPDVLSFSIASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKI 295

Query: 362 CQIIIAKRSDMLVMSSDGPLG 424
           CQIIIAKRSDMLVMSS+GP+G
Sbjct: 296 CQIIIAKRSDMLVMSSEGPVG 316


>ref|XP_003588429.1| Protein cereblon [Medicago truncatula] gi|355477477|gb|AES58680.1|
           Protein cereblon [Medicago truncatula]
          Length = 556

 Score =  245 bits (626), Expect = 2e-63
 Identities = 126/141 (89%), Positives = 130/141 (92%)
 Frame = +2

Query: 2   NCSTSGKQSSIREGLNWHCKNIVPYSSRRISRAFWPHWVYRMFDSYWLAQRAADMWKQIV 181
           +CSTSGKQSSIREGLNW  KN   YSSRR SRAF P WVYRMFDSY LAQ+AADMWKQIV
Sbjct: 336 SCSTSGKQSSIREGLNWCSKNRDLYSSRRTSRAFLPGWVYRMFDSYLLAQKAADMWKQIV 395

Query: 182 GAPSMDGLVKKPDVLSFYIASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKI 361
           GAPSMD LVKKPDVLSF IASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKI
Sbjct: 396 GAPSMDALVKKPDVLSFSIASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKI 455

Query: 362 CQIIIAKRSDMLVMSSDGPLG 424
           CQIIIAKRSDMLVMSS+GP+G
Sbjct: 456 CQIIIAKRSDMLVMSSEGPVG 476


>ref|XP_003523752.1| PREDICTED: protein cereblon-like [Glycine max]
          Length = 543

 Score =  223 bits (567), Expect = 2e-56
 Identities = 112/139 (80%), Positives = 124/139 (89%)
 Frame = +2

Query: 5   CSTSGKQSSIREGLNWHCKNIVPYSSRRISRAFWPHWVYRMFDSYWLAQRAADMWKQIVG 184
           CSTSGKQSS +E L+  CKNI  Y S +IS+AFWPHW Y+MFDSY LAQRAADMWK+IVG
Sbjct: 323 CSTSGKQSS-KEELS-RCKNICAYPSYKISKAFWPHWAYQMFDSYSLAQRAADMWKRIVG 380

Query: 185 APSMDGLVKKPDVLSFYIASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKIC 364
            P MD L+KKPD+LSF+IASKIPVSESTRQELLDIDGI+YRLRREIELLESIDLIRCK C
Sbjct: 381 MPDMDSLIKKPDILSFHIASKIPVSESTRQELLDIDGIAYRLRREIELLESIDLIRCKSC 440

Query: 365 QIIIAKRSDMLVMSSDGPL 421
           + IIAKRSDMLVMSS+GPL
Sbjct: 441 ETIIAKRSDMLVMSSEGPL 459


>ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|222854569|gb|EEE92116.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score =  199 bits (505), Expect = 3e-49
 Identities = 93/113 (82%), Positives = 106/113 (93%)
 Frame = +2

Query: 86  RISRAFWPHWVYRMFDSYWLAQRAADMWKQIVGAPSMDGLVKKPDVLSFYIASKIPVSES 265
           R+ RAFWPHWVYRM+DSY LA+RAADMWKQIVGAPSMDGLV+KPD+LSFYIASKIPVSE 
Sbjct: 335 RVPRAFWPHWVYRMYDSYCLAERAADMWKQIVGAPSMDGLVRKPDLLSFYIASKIPVSEE 394

Query: 266 TRQELLDIDGISYRLRREIELLESIDLIRCKICQIIIAKRSDMLVMSSDGPLG 424
           TRQELL+IDGISYRLRREI LLES DL++CK C+ +IA+RSDMLVMS++GPLG
Sbjct: 395 TRQELLEIDGISYRLRREIGLLESFDLVQCKTCKTVIAQRSDMLVMSTEGPLG 447


>ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|222865643|gb|EEF02774.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/129 (73%), Positives = 111/129 (86%)
 Frame = +2

Query: 38  EGLNWHCKNIVPYSSRRISRAFWPHWVYRMFDSYWLAQRAADMWKQIVGAPSMDGLVKKP 217
           EG     KN      RR+ R FWP+WVY M+DSY LA++AADMWKQIVGAPSMDGLV+KP
Sbjct: 334 EGSKRCWKNTDLNQFRRVPRTFWPYWVYSMYDSYCLAEKAADMWKQIVGAPSMDGLVRKP 393

Query: 218 DVLSFYIASKIPVSESTRQELLDIDGISYRLRREIELLESIDLIRCKICQIIIAKRSDML 397
           D+LSFYIASKIPVSE TRQELL+IDGISYRLRREI+LLE+ DL+RCK C+I+I++RSDML
Sbjct: 394 DLLSFYIASKIPVSEETRQELLEIDGISYRLRREIDLLETFDLVRCKTCKIVISRRSDML 453

Query: 398 VMSSDGPLG 424
           VMSS+GPLG
Sbjct: 454 VMSSEGPLG 462


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