BLASTX nr result

ID: Glycyrrhiza24_contig00018504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018504
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615694.1| Omega-3 fatty acid desaturase [Medicago trun...   113   2e-23
sp|P32291.1|FAD3E_PHAAU RecName: Full=Omega-3 fatty acid desatur...   103   1e-20
gb|ABY60736.1| microsomal omega-3 fatty acid desaturase [Vigna u...   103   1e-20
ref|NP_001236114.1| microsomal omega-3-fatty acid desaturase [Gl...   101   5e-20
ref|NP_001237507.1| omega-3 fatty acid desaturase, endoplasmic r...   101   5e-20

>ref|XP_003615694.1| Omega-3 fatty acid desaturase [Medicago truncatula]
           gi|355517029|gb|AES98652.1| Omega-3 fatty acid
           desaturase [Medicago truncatula]
          Length = 391

 Score =  113 bits (282), Expect = 2e-23
 Identities = 48/61 (78%), Positives = 58/61 (95%)
 Frame = -1

Query: 409 ATQAAKPIFGEYYREPEKSGPIPFHLIKYLIQSIKQDHFVSDTGDVVYYQSDPQLHQKHQ 230
           AT+AAKPIFG+YYREPEKS P+PFHLIKYL+QS+ +DHFVSDTGDVV+YQ+DPQLH+KH 
Sbjct: 331 ATKAAKPIFGDYYREPEKSSPLPFHLIKYLLQSMNEDHFVSDTGDVVFYQTDPQLHKKHN 390

Query: 229 D 227
           +
Sbjct: 391 E 391


>sp|P32291.1|FAD3E_PHAAU RecName: Full=Omega-3 fatty acid desaturase, endoplasmic reticulum;
           AltName: Full=Indole-3-acetic acid-induced protein ARG1
           gi|287562|dbj|BAA03306.1| hypothetical protein [Vigna
           radiata var. radiata]
          Length = 380

 Score =  103 bits (258), Expect = 1e-20
 Identities = 43/57 (75%), Positives = 54/57 (94%)
 Frame = -1

Query: 409 ATQAAKPIFGEYYREPEKSGPIPFHLIKYLIQSIKQDHFVSDTGDVVYYQSDPQLHQ 239
           AT++AK + G+YYREP+KSGP+PFHL+KYL+QSI QDHFVSDTGD+VYYQ+DP+LHQ
Sbjct: 317 ATKSAKSVLGKYYREPQKSGPLPFHLLKYLLQSISQDHFVSDTGDIVYYQTDPKLHQ 373


>gb|ABY60736.1| microsomal omega-3 fatty acid desaturase [Vigna unguiculata]
          Length = 371

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/57 (78%), Positives = 53/57 (92%)
 Frame = -1

Query: 409 ATQAAKPIFGEYYREPEKSGPIPFHLIKYLIQSIKQDHFVSDTGDVVYYQSDPQLHQ 239
           AT+AAK + GEYYREPE+S PIPFHLIKYL+QS+++DHFVSDTGDVVYYQ+DP LHQ
Sbjct: 314 ATKAAKGVLGEYYREPERSAPIPFHLIKYLMQSMREDHFVSDTGDVVYYQTDPHLHQ 370


>ref|NP_001236114.1| microsomal omega-3-fatty acid desaturase [Glycine max]
           gi|27902575|gb|AAO24264.1| microsomal omega-3-fatty acid
           desaturase [Glycine max]
          Length = 380

 Score =  101 bits (252), Expect = 5e-20
 Identities = 45/61 (73%), Positives = 53/61 (86%)
 Frame = -1

Query: 409 ATQAAKPIFGEYYREPEKSGPIPFHLIKYLIQSIKQDHFVSDTGDVVYYQSDPQLHQKHQ 230
           ATQAAKP+ G+YYREPE+S P+PFHLIKYLIQS++QDHFVSDTGDVVYYQ+D  L    +
Sbjct: 320 ATQAAKPVLGDYYREPERSAPLPFHLIKYLIQSMRQDHFVSDTGDVVYYQTDSLLLHSQR 379

Query: 229 D 227
           D
Sbjct: 380 D 380


>ref|NP_001237507.1| omega-3 fatty acid desaturase, endoplasmic reticulum [Glycine max]
           gi|1345974|sp|P48625.1|FAD3E_SOYBN RecName: Full=Omega-3
           fatty acid desaturase, endoplasmic reticulum
           gi|408794|gb|AAA61777.1| omega-3 fatty acid desaturase
           [Glycine soja] gi|34787274|dbj|BAC87756.1| microsomal
           omega-3 fatty acid desaturase [Glycine max]
          Length = 380

 Score =  101 bits (252), Expect = 5e-20
 Identities = 45/61 (73%), Positives = 53/61 (86%)
 Frame = -1

Query: 409 ATQAAKPIFGEYYREPEKSGPIPFHLIKYLIQSIKQDHFVSDTGDVVYYQSDPQLHQKHQ 230
           ATQAAKP+ G+YYREPE+S P+PFHLIKYLIQS++QDHFVSDTGDVVYYQ+D  L    +
Sbjct: 320 ATQAAKPVLGDYYREPERSAPLPFHLIKYLIQSMRQDHFVSDTGDVVYYQTDSLLLHSQR 379

Query: 229 D 227
           D
Sbjct: 380 D 380


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