BLASTX nr result

ID: Glycyrrhiza24_contig00018503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018503
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34970.1| unknown [Medicago truncatula]                           98   8e-19
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...    98   8e-19
ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic...    95   5e-18
gb|ABD33114.2| RecA bacterial DNA recombination protein [Medicag...    95   5e-18
ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog ...    85   7e-15

>gb|AFK34970.1| unknown [Medicago truncatula]
          Length = 269

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/50 (94%), Positives = 49/50 (98%)
 Frame = +2

Query: 2   TNRIILYWNGDERHAFIDKSPSLKSASAPYSVTTRGIRNSTPSSKRIKMV 151
           TNRIILYWNGDERHA+IDKSPSLKSASAPYSVT+RGIRNST SSKRIKMV
Sbjct: 220 TNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIKMV 269


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|357477663|ref|XP_003609117.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510139|gb|AES91281.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510172|gb|AES91314.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/50 (94%), Positives = 49/50 (98%)
 Frame = +2

Query: 2   TNRIILYWNGDERHAFIDKSPSLKSASAPYSVTTRGIRNSTPSSKRIKMV 151
           TNRIILYWNGDERHA+IDKSPSLKSASAPYSVT+RGIRNST SSKRIKMV
Sbjct: 298 TNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIKMV 347


>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355506214|gb|AES87356.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = +2

Query: 2   TNRIILYWNGDERHAFIDKSPSLKSASAPYSVTTRGIRNSTPSSKRIKMV 151
           TNRIILYWN DERHA+IDKSPSLKSASAPYSVT+RGIRNST SSKRIKMV
Sbjct: 298 TNRIILYWNDDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIKMV 347


>gb|ABD33114.2| RecA bacterial DNA recombination protein [Medicago truncatula]
          Length = 269

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = +2

Query: 2   TNRIILYWNGDERHAFIDKSPSLKSASAPYSVTTRGIRNSTPSSKRIKMV 151
           TNRIILYWN DERHA+IDKSPSLKSASAPYSVT+RGIRNST SSKRIKMV
Sbjct: 220 TNRIILYWNDDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIKMV 269


>ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis
           sativus] gi|449480051|ref|XP_004155785.1| PREDICTED: DNA
           repair protein RAD51 homolog 3-like [Cucumis sativus]
          Length = 346

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/50 (78%), Positives = 46/50 (92%)
 Frame = +2

Query: 2   TNRIILYWNGDERHAFIDKSPSLKSASAPYSVTTRGIRNSTPSSKRIKMV 151
           TNRIILYWNGDER+A+++KSPSL+SASAPYSVT RGIRN T S+KR KM+
Sbjct: 297 TNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346


Top