BLASTX nr result

ID: Glycyrrhiza24_contig00018485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018485
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554690.1| PREDICTED: lamin-like protein-like [Glycine ...   206   2e-51
ref|XP_003543863.1| PREDICTED: lamin-like protein-like [Glycine ...   202   3e-50
gb|ABD32487.1| Blue (type 1) copper domain [Medicago truncatula]      176   2e-42
ref|XP_004172438.1| PREDICTED: lamin-like protein-like, partial ...   150   1e-34
ref|XP_004136681.1| PREDICTED: lamin-like protein-like [Cucumis ...   149   2e-34

>ref|XP_003554690.1| PREDICTED: lamin-like protein-like [Glycine max]
          Length = 176

 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/159 (61%), Positives = 115/159 (72%), Gaps = 6/159 (3%)
 Frame = -2

Query: 464 LGWLSLEVLGGPVRHRVGGSKGW-TQDVNYTEWSSHEHVFVGDWLLFMFDKRYYNVLEVN 288
           +GWLS+  +G PV H+VGGSKGW  QDVNYTEWS+ EH++VGDWL+F FDKRY+NVLEVN
Sbjct: 18  MGWLSVVAMGSPVLHKVGGSKGWINQDVNYTEWSAQEHIYVGDWLIFKFDKRYFNVLEVN 77

Query: 287 KTSYERCIERDFIKNATRGGRDVVELTEARTYYYLSGGGYCFHGMRVAVQVEEHQ----- 123
           KTSYE CI+RDFIKN TRGGRDVV++TEARTYYYLSGGGYCFHGMRVAVQV++       
Sbjct: 78  KTSYENCIDRDFIKNITRGGRDVVQMTEARTYYYLSGGGYCFHGMRVAVQVQQEDQDPAL 137

Query: 122 LAXXXXXXXXXXXXXXXXXXXXYKWIWIVVVANVLFVIN 6
                                    IWI++VANV+  +N
Sbjct: 138 AMAAPPAPSPVAYGSSSPLPSVCTCIWIIIVANVVVFVN 176


>ref|XP_003543863.1| PREDICTED: lamin-like protein-like [Glycine max]
          Length = 175

 Score =  202 bits (513), Expect = 3e-50
 Identities = 97/152 (63%), Positives = 114/152 (75%), Gaps = 1/152 (0%)
 Frame = -2

Query: 464 LGWLSLEVLGGPVRHRVGGSKGW-TQDVNYTEWSSHEHVFVGDWLLFMFDKRYYNVLEVN 288
           +GWLSL V+G PV H+VGGSKGW   DVNYTEW++ EHV+VGDWL+F FD+RY+NVLEVN
Sbjct: 18  IGWLSLVVMGSPVLHKVGGSKGWINHDVNYTEWAAQEHVYVGDWLIFKFDRRYFNVLEVN 77

Query: 287 KTSYERCIERDFIKNATRGGRDVVELTEARTYYYLSGGGYCFHGMRVAVQVEEHQLAXXX 108
           KTSYE CI+RDFIKN TRGGRDVV++TEARTYYYLS GGYCFHGM+VAVQV+E+Q     
Sbjct: 78  KTSYENCIDRDFIKNITRGGRDVVQMTEARTYYYLSDGGYCFHGMKVAVQVQEYQ--DPA 135

Query: 107 XXXXXXXXXXXXXXXXXYKWIWIVVVANVLFV 12
                            +  IWI+V   VLFV
Sbjct: 136 LAMVAPAPSPVVSGSSVFTCIWIIVANVVLFV 167


>gb|ABD32487.1| Blue (type 1) copper domain [Medicago truncatula]
          Length = 185

 Score =  176 bits (445), Expect = 2e-42
 Identities = 83/126 (65%), Positives = 99/126 (78%), Gaps = 13/126 (10%)
 Frame = -2

Query: 464 LGWLSL---EVLGGPVRHRVGGSKGWTQDVNYTEWSSHEHVFVGDWLL----------FM 324
           LG LSL    V+GGP  H+VGGSKGW ++VNYT WSS EHV+VGDWL           F+
Sbjct: 14  LGVLSLWPMVVMGGPKLHKVGGSKGWKENVNYTTWSSQEHVYVGDWLSRRLSGCSQGEFV 73

Query: 323 FDKRYYNVLEVNKTSYERCIERDFIKNATRGGRDVVELTEARTYYYLSGGGYCFHGMRVA 144
           FDKRYYNVLEVNKT Y+ CI+  FI+N TRGGRDVV+LTEA+TYY+++GGGYCFHGM+VA
Sbjct: 74  FDKRYYNVLEVNKTGYDYCIDMTFIRNLTRGGRDVVQLTEAKTYYFITGGGYCFHGMKVA 133

Query: 143 VQVEEH 126
           V V+EH
Sbjct: 134 VDVQEH 139


>ref|XP_004172438.1| PREDICTED: lamin-like protein-like, partial [Cucumis sativus]
          Length = 188

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/110 (64%), Positives = 84/110 (76%), Gaps = 2/110 (1%)
 Frame = -2

Query: 464 LGWLSLEVLGG-PVRHRVGGSK-GWTQDVNYTEWSSHEHVFVGDWLLFMFDKRYYNVLEV 291
           +GWL   V G  PV H VGG K  WT ++N+T+WS H+H +VGDWL F FDK  YNVLEV
Sbjct: 15  VGWLLSGVEGKQPVLHNVGGGKYTWTTNINFTDWSIHDHFYVGDWLYFGFDKHIYNVLEV 74

Query: 290 NKTSYERCIERDFIKNATRGGRDVVELTEARTYYYLSGGGYCFHGMRVAV 141
           NKTSYE C E+DFI N T+GGRDV  LTEA+TYY+LSG G+CF GM+VAV
Sbjct: 75  NKTSYENCNEKDFIFNITKGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAV 124


>ref|XP_004136681.1| PREDICTED: lamin-like protein-like [Cucumis sativus]
           gi|449494702|ref|XP_004159623.1| PREDICTED: lamin-like
           protein-like [Cucumis sativus]
          Length = 184

 Score =  149 bits (377), Expect = 2e-34
 Identities = 67/110 (60%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
 Frame = -2

Query: 461 GWLSLEVLG---GPVRHRVGGSKGWTQDVNYTEWSSHEHVFVGDWLLFMFDKRYYNVLEV 291
           GWL L ++    G   H+VG S+GWT + NYT WSS  H ++GDWL F+FDKRYYNVLEV
Sbjct: 25  GWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEV 84

Query: 290 NKTSYERCIERDFIKNATRGGRDVVELTEARTYYYLSGGGYCFHGMRVAV 141
           NK S+E C E+DFIKN TRGGRDV +LTE   Y+++ GGGYCF GM++AV
Sbjct: 85  NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 134


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