BLASTX nr result

ID: Glycyrrhiza24_contig00018455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018455
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36976.1| unknown [Lotus japonicus]                              179   2e-43
gb|AFK45997.1| unknown [Lotus japonicus]                              177   8e-43
gb|ACJ86267.1| unknown [Medicago truncatula] gi|388502346|gb|AFK...   167   8e-40
ref|XP_003539027.1| PREDICTED: uncharacterized protein LOC100805...   164   5e-39
ref|XP_003541098.1| PREDICTED: uncharacterized protein LOC100790...   159   3e-37

>gb|AFK36976.1| unknown [Lotus japonicus]
          Length = 261

 Score =  179 bits (455), Expect = 2e-43
 Identities = 82/110 (74%), Positives = 93/110 (84%)
 Frame = +3

Query: 54  MYSMGKFPHQRDTNMMMMSSTKCNEITHFSHPKHKLRFHYSEFPFKCDGCNEIGIGSRYK 233
           MYS  K   +++T++   ++TKC+EI+HFSHPKHKLRF YSEFPFKCDGC E+GIGSRYK
Sbjct: 2   MYSTSK-SFRKETSI---TNTKCSEISHFSHPKHKLRFEYSEFPFKCDGCKEVGIGSRYK 57

Query: 234 CSINCDYDLHMHCAIPSSPNSLFHPFYPKCSFQFLSKPQGNTPRYCNACE 383
           CS  CDYDLHMHCAIPS   SL+HPFYPKCSFQFLSKP GN PRYCNACE
Sbjct: 58  CSSICDYDLHMHCAIPSP--SLYHPFYPKCSFQFLSKPPGNIPRYCNACE 105


>gb|AFK45997.1| unknown [Lotus japonicus]
          Length = 182

 Score =  177 bits (449), Expect = 8e-43
 Identities = 81/110 (73%), Positives = 92/110 (83%)
 Frame = +3

Query: 54  MYSMGKFPHQRDTNMMMMSSTKCNEITHFSHPKHKLRFHYSEFPFKCDGCNEIGIGSRYK 233
           MYS  K   +++T++   ++TKC+EI+HFSHPKHKLRF YSEFPFKCDGC E+GIG RYK
Sbjct: 2   MYSTSK-SFRKETSI---TNTKCSEISHFSHPKHKLRFEYSEFPFKCDGCKEVGIGLRYK 57

Query: 234 CSINCDYDLHMHCAIPSSPNSLFHPFYPKCSFQFLSKPQGNTPRYCNACE 383
           CS  CDYDLHMHCAIPS   SL+HPFYPKCSFQFLSKP GN PRYCNACE
Sbjct: 58  CSSICDYDLHMHCAIPSP--SLYHPFYPKCSFQFLSKPPGNIPRYCNACE 105


>gb|ACJ86267.1| unknown [Medicago truncatula] gi|388502346|gb|AFK39239.1| unknown
           [Medicago truncatula]
          Length = 267

 Score =  167 bits (423), Expect = 8e-40
 Identities = 77/110 (70%), Positives = 89/110 (80%)
 Frame = +3

Query: 54  MYSMGKFPHQRDTNMMMMSSTKCNEITHFSHPKHKLRFHYSEFPFKCDGCNEIGIGSRYK 233
           MYS+ KF + +DT M   ++ + +EI+HFSH KHKL F +SEFPFKCDGC EIGIGSRY 
Sbjct: 1   MYSIAKFSNHKDTTMN--TTKRYDEISHFSHQKHKLTFQHSEFPFKCDGCKEIGIGSRYS 58

Query: 234 CSINCDYDLHMHCAIPSSPNSLFHPFYPKCSFQFLSKPQGNTPRYCNACE 383
           C+I CDYDLHMHC+IPS   SLFHPFYPKC FQFLSKP G+ PRYCNACE
Sbjct: 59  CNI-CDYDLHMHCSIPSP--SLFHPFYPKCCFQFLSKPPGDIPRYCNACE 105


>ref|XP_003539027.1| PREDICTED: uncharacterized protein LOC100805046 [Glycine max]
          Length = 258

 Score =  164 bits (416), Expect = 5e-39
 Identities = 74/105 (70%), Positives = 88/105 (83%), Gaps = 2/105 (1%)
 Frame = +3

Query: 75  PHQRDTNMMMMSST--KCNEITHFSHPKHKLRFHYSEFPFKCDGCNEIGIGSRYKCSINC 248
           PH  DT ++ + +T  K NEI+HFSH +HKLRF YSEFPFKCDGC E+GIGSRYKCSI C
Sbjct: 5   PHHSDTKLLPIINTAMKYNEISHFSHTEHKLRFEYSEFPFKCDGCKEVGIGSRYKCSI-C 63

Query: 249 DYDLHMHCAIPSSPNSLFHPFYPKCSFQFLSKPQGNTPRYCNACE 383
           D+DLHMHCA+ +SP +L HPFY KC+FQF+SKP G+TPRYCNACE
Sbjct: 64  DFDLHMHCAMITSP-TLHHPFYTKCNFQFMSKPPGDTPRYCNACE 107


>ref|XP_003541098.1| PREDICTED: uncharacterized protein LOC100790779 [Glycine max]
          Length = 238

 Score =  159 bits (401), Expect = 3e-37
 Identities = 69/89 (77%), Positives = 80/89 (89%)
 Frame = +3

Query: 117 KCNEITHFSHPKHKLRFHYSEFPFKCDGCNEIGIGSRYKCSINCDYDLHMHCAIPSSPNS 296
           K +EI+HFSHP+HKLRF YSEFPFKCDGC E+GIGSRYKCSI CD+DLHMHCA+ +SP +
Sbjct: 2   KYSEISHFSHPQHKLRFEYSEFPFKCDGCKEVGIGSRYKCSI-CDFDLHMHCAMITSP-T 59

Query: 297 LFHPFYPKCSFQFLSKPQGNTPRYCNACE 383
           L HPFY KC+FQF+SKP G+TPRYCNACE
Sbjct: 60  LLHPFYTKCNFQFMSKPPGDTPRYCNACE 88


Top