BLASTX nr result
ID: Glycyrrhiza24_contig00018435
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00018435 (538 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814... 229 3e-58 ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791... 222 3e-56 ref|XP_002519367.1| replication factor C / DNA polymerase III ga... 196 1e-48 ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|2... 192 4e-47 ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212... 191 6e-47 >ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814391 [Glycine max] Length = 1237 Score = 229 bits (583), Expect = 3e-58 Identities = 127/186 (68%), Positives = 135/186 (72%), Gaps = 7/186 (3%) Frame = -1 Query: 538 TTSINXXXXXXXXXXXXXLPGRQGCGIPCYWSKRK-------GSCCSPSLSDTLRRKGSS 380 TTS+N LPGRQGCGIPCYWSKR GSC SPSLSDTLRRKGSS Sbjct: 288 TTSVNDGDGDDEIDDHLDLPGRQGCGIPCYWSKRTPKHRGMCGSCYSPSLSDTLRRKGSS 347 Query: 379 MFCGSQSIYPXXXXXXXXXXXXXXSLRSAQGVLPLLTNSGDVREGSSMGTGRSYDDDELS 200 M CGSQ+IYP SLRSA+GV+PLLTNSGDVREGSS+GTGRS DDELS Sbjct: 348 MLCGSQTIYPRHRRSASASHKRRLSLRSARGVIPLLTNSGDVREGSSVGTGRS--DDELS 405 Query: 199 TNFGELDLEGLSRLDGXXXXXXXXXXSQEGLEIVALNGEGEDDGTPENSRSFSHKYKPLF 20 TNFGELDLEGLSRLDG SQEGLEIVALNGEGE DGTPEN+RSFS KY+P+F Sbjct: 406 TNFGELDLEGLSRLDG--RRWSSSCRSQEGLEIVALNGEGEYDGTPENNRSFSQKYRPMF 463 Query: 19 FGELIG 2 FGELIG Sbjct: 464 FGELIG 469 >ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791561 [Glycine max] Length = 1236 Score = 222 bits (565), Expect = 3e-56 Identities = 123/186 (66%), Positives = 132/186 (70%), Gaps = 7/186 (3%) Frame = -1 Query: 538 TTSINXXXXXXXXXXXXXLPGRQGCGIPCYWSKRK-------GSCCSPSLSDTLRRKGSS 380 TTS+N LPGRQGCGIPCYWSKR GSC SPSLSDTLRRKGSS Sbjct: 285 TTSVNDGDGDDEIDDHLDLPGRQGCGIPCYWSKRTPKHRRMCGSCYSPSLSDTLRRKGSS 344 Query: 379 MFCGSQSIYPXXXXXXXXXXXXXXSLRSAQGVLPLLTNSGDVREGSSMGTGRSYDDDELS 200 M CGSQSIYP SLRSA+GV+PLLTNSGDVREGSS+GTG + DDELS Sbjct: 345 MLCGSQSIYPTHRRSASASHKRRLSLRSARGVIPLLTNSGDVREGSSVGTG--WSDDELS 402 Query: 199 TNFGELDLEGLSRLDGXXXXXXXXXXSQEGLEIVALNGEGEDDGTPENSRSFSHKYKPLF 20 TNFGELDLEGLSRLDG SQEGLEIVALNGEGE + TPEN+RSFS KY+P+F Sbjct: 403 TNFGELDLEGLSRLDG--RRWSSSCRSQEGLEIVALNGEGEYESTPENNRSFSQKYRPMF 460 Query: 19 FGELIG 2 FGEL G Sbjct: 461 FGELFG 466 >ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] gi|223541434|gb|EEF42984.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] Length = 1270 Score = 196 bits (499), Expect = 1e-48 Identities = 108/167 (64%), Positives = 119/167 (71%), Gaps = 7/167 (4%) Frame = -1 Query: 481 PGRQGCGIPCYWSKRK-------GSCCSPSLSDTLRRKGSSMFCGSQSIYPXXXXXXXXX 323 PGRQGCGIPCYWSKR GSCCSPSLSDT++RKG+SM CG QS+Y Sbjct: 309 PGRQGCGIPCYWSKRTPRHRGVCGSCCSPSLSDTIQRKGTSMLCGRQSMYHRRWHSSSVY 368 Query: 322 XXXXXSLRSAQGVLPLLTNSGDVREGSSMGTGRSYDDDELSTNFGELDLEGLSRLDGXXX 143 S RSAQG+LPLL NS D R GSS+GTG S DDELSTNFGELDLE LSRLDG Sbjct: 369 NKRRISSRSAQGLLPLLANS-DGRGGSSIGTGNS--DDELSTNFGELDLEALSRLDGRRW 425 Query: 142 XXXXXXXSQEGLEIVALNGEGEDDGTPENSRSFSHKYKPLFFGELIG 2 Q+GLEIVALNG+GE++GTPEN RS S KYKPLFFGE+IG Sbjct: 426 SSCRS---QDGLEIVALNGDGEEEGTPENIRSLSQKYKPLFFGEVIG 469 >ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|222839109|gb|EEE77460.1| predicted protein [Populus trichocarpa] Length = 1197 Score = 192 bits (487), Expect = 4e-47 Identities = 104/168 (61%), Positives = 114/168 (67%), Gaps = 8/168 (4%) Frame = -1 Query: 481 PGRQGCGIPCYWSKRK--------GSCCSPSLSDTLRRKGSSMFCGSQSIYPXXXXXXXX 326 PGRQGCGIPCYWSKR SCCSPSLSDTLRRKGSSMFCGSQ +Y Sbjct: 329 PGRQGCGIPCYWSKRTPRYRGVCGSSCCSPSLSDTLRRKGSSMFCGSQPLYHRRRRSWSI 388 Query: 325 XXXXXXSLRSAQGVLPLLTNSGDVREGSSMGTGRSYDDDELSTNFGELDLEGLSRLDGXX 146 R+ +LPLLTNSGD GSS+GTG S DDELSTN+GELDLE LSRLDG Sbjct: 389 SNKRRIGSRTGHALLPLLTNSGDGIGGSSIGTGLS--DDELSTNYGELDLEALSRLDGRR 446 Query: 145 XXXXXXXXSQEGLEIVALNGEGEDDGTPENSRSFSHKYKPLFFGELIG 2 Q+GLEIVALNG+GE++GTPEN S S KYKP+FF ELIG Sbjct: 447 WSSCRS---QDGLEIVALNGDGEEEGTPENIGSLSQKYKPVFFSELIG 491 >ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212356 [Cucumis sativus] gi|449478091|ref|XP_004155220.1| PREDICTED: uncharacterized protein LOC101227259 [Cucumis sativus] Length = 1267 Score = 191 bits (485), Expect = 6e-47 Identities = 109/167 (65%), Positives = 115/167 (68%), Gaps = 7/167 (4%) Frame = -1 Query: 481 PGRQGCGIPCYWSKRK-------GSCCSPSLSDTLRRKGSSMFCGSQSIYPXXXXXXXXX 323 PGRQGCGIPCYWSKR GSCCSPSLSDTLRRKGSS+ GSQSIY Sbjct: 333 PGRQGCGIPCYWSKRTPKHRGICGSCCSPSLSDTLRRKGSSILFGSQSIYSRRKSINSSK 392 Query: 322 XXXXXSLRSAQGVLPLLTNSGDVREGSSMGTGRSYDDDELSTNFGELDLEGLSRLDGXXX 143 SA+GVLPLLTNS D GSS+GTGRS DDELSTNFGELDLE LSRLDG Sbjct: 393 RRFASG--SARGVLPLLTNSADGGVGSSIGTGRS--DDELSTNFGELDLEALSRLDGRRW 448 Query: 142 XXXXXXXSQEGLEIVALNGEGEDDGTPENSRSFSHKYKPLFFGELIG 2 EGLEIVALNGE E GTPE++RSFS KYKP+FF ELIG Sbjct: 449 SSSCRS--HEGLEIVALNGEVEGGGTPESTRSFSQKYKPMFFNELIG 493