BLASTX nr result

ID: Glycyrrhiza24_contig00018425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018425
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46661.1| unknown [Lotus japonicus]                              290   8e-77
ref|XP_003621882.1| Geranylgeranyl transferase type-1 subunit be...   290   1e-76
ref|XP_003518650.1| PREDICTED: geranylgeranyl transferase type-1...   275   5e-72
ref|XP_003552693.1| PREDICTED: geranylgeranyl transferase type-1...   273   1e-71
ref|XP_003520042.1| PREDICTED: LOW QUALITY PROTEIN: geranylgeran...   229   3e-58

>gb|AFK46661.1| unknown [Lotus japonicus]
          Length = 341

 Score =  290 bits (743), Expect = 8e-77
 Identities = 137/157 (87%), Positives = 146/157 (92%)
 Frame = -2

Query: 472 MEKDLHVTFVEMMYHLLPTPYESQEINHLTLAYFVISSLDILNALHSVDKEVIANWVLSF 293
           M KDLHVTF++MMY LLP+PYESQEINHLTLAYF+IS LDILNALHSV+KE +ANWVLSF
Sbjct: 1   MNKDLHVTFLQMMYQLLPSPYESQEINHLTLAYFIISGLDILNALHSVEKEAVANWVLSF 60

Query: 292 QFHPGTMADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCALAILKIVGYDLSS 113
           Q HPGT  DPNNGQFYGFHGSRTSQFPPD+NGV  HNNSHLAS+YCALAILKIVGYDLSS
Sbjct: 61  QVHPGTKPDPNNGQFYGFHGSRTSQFPPDENGVLLHNNSHLASSYCALAILKIVGYDLSS 120

Query: 112 LDSESMLTSMRNLQQPDGSFMPIHTGGETDLRFVYCA 2
           LDSE ML+SMRNLQQ DGSFMPIHTGGETDLRFVYCA
Sbjct: 121 LDSELMLSSMRNLQQSDGSFMPIHTGGETDLRFVYCA 157


>ref|XP_003621882.1| Geranylgeranyl transferase type-1 subunit beta [Medicago
           truncatula] gi|355496897|gb|AES78100.1| Geranylgeranyl
           transferase type-1 subunit beta [Medicago truncatula]
          Length = 520

 Score =  290 bits (742), Expect = 1e-76
 Identities = 136/157 (86%), Positives = 146/157 (92%)
 Frame = -2

Query: 472 MEKDLHVTFVEMMYHLLPTPYESQEINHLTLAYFVISSLDILNALHSVDKEVIANWVLSF 293
           ++KDLHVTF +MMYHLLP PYESQEINHLTLAYFVISSLDILN+LH V+KE +ANWVLSF
Sbjct: 15  IDKDLHVTFAQMMYHLLPNPYESQEINHLTLAYFVISSLDILNSLHLVEKEAVANWVLSF 74

Query: 292 QFHPGTMADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCALAILKIVGYDLSS 113
           Q   GT  DPNNGQFYGFHGS+TSQFPPD+NGVFHHNNSHLASTYCALAILKIVGYDLSS
Sbjct: 75  QVQRGTTNDPNNGQFYGFHGSKTSQFPPDENGVFHHNNSHLASTYCALAILKIVGYDLSS 134

Query: 112 LDSESMLTSMRNLQQPDGSFMPIHTGGETDLRFVYCA 2
           LDSESM +SM+NLQQPDGSFMPIH GGETDLRFVYCA
Sbjct: 135 LDSESMSSSMKNLQQPDGSFMPIHIGGETDLRFVYCA 171


>ref|XP_003518650.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
           [Glycine max]
          Length = 355

 Score =  275 bits (702), Expect = 5e-72
 Identities = 126/159 (79%), Positives = 147/159 (92%)
 Frame = -2

Query: 478 EIMEKDLHVTFVEMMYHLLPTPYESQEINHLTLAYFVISSLDILNALHSVDKEVIANWVL 299
           EIMEKD+HVTF+E+MY+LLP+PYESQEINHLTLAYFVIS LDIL++LH V K+ + +WVL
Sbjct: 13  EIMEKDVHVTFLELMYYLLPSPYESQEINHLTLAYFVISGLDILDSLHKVAKDAVVSWVL 72

Query: 298 SFQFHPGTMADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCALAILKIVGYDL 119
           SFQ HPG   D N+GQFYGFHGS+TSQFPPD+NGV  HNNSHLASTYCA++ILKIVGY+L
Sbjct: 73  SFQAHPGAKTDLNDGQFYGFHGSKTSQFPPDENGVLIHNNSHLASTYCAISILKIVGYEL 132

Query: 118 SSLDSESMLTSMRNLQQPDGSFMPIHTGGETDLRFVYCA 2
           S+LDSE+++TSMRNLQQPDGSF+PIHTGGETDLRFVYCA
Sbjct: 133 SNLDSETIVTSMRNLQQPDGSFIPIHTGGETDLRFVYCA 171


>ref|XP_003552693.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
           [Glycine max]
          Length = 347

 Score =  273 bits (698), Expect = 1e-71
 Identities = 129/169 (76%), Positives = 150/169 (88%), Gaps = 2/169 (1%)
 Frame = -2

Query: 502 SSFPEEC--WEIMEKDLHVTFVEMMYHLLPTPYESQEINHLTLAYFVISSLDILNALHSV 329
           +S  EEC   EIMEKD HV F+E+MY++LP+PYESQEINHLTLAYFVIS LDILN+LH V
Sbjct: 2   NSTEEECRGCEIMEKDAHVRFLELMYYMLPSPYESQEINHLTLAYFVISGLDILNSLHKV 61

Query: 328 DKEVIANWVLSFQFHPGTMADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCAL 149
            K+ + +WVLSFQ HPG  AD N+GQFYGFHGS+TSQFPPD+NGV  HNNSHLASTYCA+
Sbjct: 62  AKDAVISWVLSFQAHPGAKADLNDGQFYGFHGSKTSQFPPDENGVLIHNNSHLASTYCAI 121

Query: 148 AILKIVGYDLSSLDSESMLTSMRNLQQPDGSFMPIHTGGETDLRFVYCA 2
           +ILKIVGY+LS+LDSE+++TSMRNLQQPDGSF+ IHTGGETDLRFVYCA
Sbjct: 122 SILKIVGYELSNLDSETIVTSMRNLQQPDGSFISIHTGGETDLRFVYCA 170


>ref|XP_003520042.1| PREDICTED: LOW QUALITY PROTEIN: geranylgeranyl transferase type-1
           subunit beta-like [Glycine max]
          Length = 268

 Score =  229 bits (583), Expect = 3e-58
 Identities = 106/150 (70%), Positives = 130/150 (86%)
 Frame = -2

Query: 451 TFVEMMYHLLPTPYESQEINHLTLAYFVISSLDILNALHSVDKEVIANWVLSFQFHPGTM 272
           + +E+MY+LLP+PYESQEINHLTLAYFVIS L IL++   V K+V+ +WVL FQ HP   
Sbjct: 13  SILELMYYLLPSPYESQEINHLTLAYFVISGLGILDSXLKVAKDVVVSWVLCFQAHPNAK 72

Query: 271 ADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCALAILKIVGYDLSSLDSESML 92
           AD N+G+F GFHGS+TSQFPPD+NG+  HNNS LASTYCA++ILKI G +LS+LDSE+++
Sbjct: 73  ADLNDGKFNGFHGSKTSQFPPDENGIRKHNNSQLASTYCAISILKIFGCELSNLDSETIV 132

Query: 91  TSMRNLQQPDGSFMPIHTGGETDLRFVYCA 2
           TSMRNLQQPDGSF+PIHTGG+TDLRFVYCA
Sbjct: 133 TSMRNLQQPDGSFIPIHTGGQTDLRFVYCA 162


Top