BLASTX nr result

ID: Glycyrrhiza24_contig00018409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018409
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621750.1| 60S acidic ribosomal protein P0 [Medicago tr...   253   1e-65
gb|AFK45016.1| unknown [Lotus japonicus]                              248   3e-64
ref|XP_003519385.1| PREDICTED: 60S acidic ribosomal protein P0-l...   245   3e-63
ref|NP_001236064.1| uncharacterized protein LOC100305996 [Glycin...   245   3e-63
ref|XP_003626217.1| 60S acidic ribosomal protein P0 [Medicago tr...   208   4e-52

>ref|XP_003621750.1| 60S acidic ribosomal protein P0 [Medicago truncatula]
           gi|355496765|gb|AES77968.1| 60S acidic ribosomal protein
           P0 [Medicago truncatula]
          Length = 188

 Score =  253 bits (646), Expect = 1e-65
 Identities = 125/145 (86%), Positives = 134/145 (92%), Gaps = 1/145 (0%)
 Frame = -2

Query: 432 GIRRALHADSVVVMGKNSLMKRSITQVAQKTGNN-AFLNLVPLLVGNVALVFTKADLREV 256
           GIRRALH DSVVVMGKNSLMKRSI Q A+KTGN+ AFLNLVPLLVGNVAL+FTK DLR+V
Sbjct: 39  GIRRALHEDSVVVMGKNSLMKRSIIQAAEKTGNSHAFLNLVPLLVGNVALIFTKGDLRDV 98

Query: 255 SKQVAKYKVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGLTCCQQQSSQASEPFLVCSKF 76
           S+++AK KVVNPILMCPKYMSYDSY TCSYMQSGQLPLGLTCC QQSSQASEPFLV SKF
Sbjct: 99  SERIAKLKVVNPILMCPKYMSYDSYKTCSYMQSGQLPLGLTCCNQQSSQASEPFLVSSKF 158

Query: 75  SPAQHCFMMRSRQFLTTSIWAPFLL 1
           SP QHC+MMRSRQFL TSIW+PFLL
Sbjct: 159 SPPQHCYMMRSRQFLLTSIWSPFLL 183


>gb|AFK45016.1| unknown [Lotus japonicus]
          Length = 187

 Score =  248 bits (634), Expect = 3e-64
 Identities = 120/144 (83%), Positives = 130/144 (90%)
 Frame = -2

Query: 432 GIRRALHADSVVVMGKNSLMKRSITQVAQKTGNNAFLNLVPLLVGNVALVFTKADLREVS 253
           GIRRALH DSVVVMGKN+LMKRSI   A+KTGN AFLNLVPLLVGNVAL+FTK DLREVS
Sbjct: 39  GIRRALHGDSVVVMGKNTLMKRSIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVS 98

Query: 252 KQVAKYKVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGLTCCQQQSSQASEPFLVCSKFS 73
           +Q+AKYKVV+PILMCPKYM+YDSY TCSY+QSGQLPLGLTCC QQS+Q SEPFLV SKF 
Sbjct: 99  EQIAKYKVVDPILMCPKYMTYDSYRTCSYLQSGQLPLGLTCCNQQSTQTSEPFLVSSKFL 158

Query: 72  PAQHCFMMRSRQFLTTSIWAPFLL 1
           P QHC +MRSRQFL TSIWAPFLL
Sbjct: 159 PHQHCHLMRSRQFLMTSIWAPFLL 182


>ref|XP_003519385.1| PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max]
          Length = 187

 Score =  245 bits (625), Expect = 3e-63
 Identities = 118/144 (81%), Positives = 129/144 (89%)
 Frame = -2

Query: 432 GIRRALHADSVVVMGKNSLMKRSITQVAQKTGNNAFLNLVPLLVGNVALVFTKADLREVS 253
           GIRR L+ADSVVVMGKNS+MKRSI   A+KTGN AFLNLVPLLVGNVAL+FTK DLREVS
Sbjct: 39  GIRRGLNADSVVVMGKNSMMKRSIILDAKKTGNKAFLNLVPLLVGNVALIFTKGDLREVS 98

Query: 252 KQVAKYKVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGLTCCQQQSSQASEPFLVCSKFS 73
           +Q+AKYKVV PILMCPKY SYD+Y  C+YMQSGQLPLGLTCC QQS+QASEPFLVCSKF 
Sbjct: 99  EQIAKYKVVQPILMCPKYTSYDTYQNCTYMQSGQLPLGLTCCNQQSAQASEPFLVCSKFL 158

Query: 72  PAQHCFMMRSRQFLTTSIWAPFLL 1
           P QHCF+MRSRQFL TSIW+P LL
Sbjct: 159 PHQHCFLMRSRQFLMTSIWSPLLL 182


>ref|NP_001236064.1| uncharacterized protein LOC100305996 [Glycine max]
           gi|255627221|gb|ACU13955.1| unknown [Glycine max]
          Length = 187

 Score =  245 bits (625), Expect = 3e-63
 Identities = 118/144 (81%), Positives = 129/144 (89%)
 Frame = -2

Query: 432 GIRRALHADSVVVMGKNSLMKRSITQVAQKTGNNAFLNLVPLLVGNVALVFTKADLREVS 253
           GIRR L+ADSVVVMGK+S+MKRSI   AQKTGN AFLNLVPLLVGNVAL+FTK DLREVS
Sbjct: 39  GIRRGLNADSVVVMGKSSMMKRSIILDAQKTGNKAFLNLVPLLVGNVALIFTKGDLREVS 98

Query: 252 KQVAKYKVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGLTCCQQQSSQASEPFLVCSKFS 73
           +Q+AKYKVV PILMCPKY SYD+Y  C+YMQSGQ+PLGLTCC QQSSQASEPFLVCSKF 
Sbjct: 99  EQIAKYKVVQPILMCPKYTSYDTYQNCTYMQSGQIPLGLTCCNQQSSQASEPFLVCSKFL 158

Query: 72  PAQHCFMMRSRQFLTTSIWAPFLL 1
           P QHCF+MRSRQFL TSIW+P LL
Sbjct: 159 PHQHCFLMRSRQFLMTSIWSPLLL 182


>ref|XP_003626217.1| 60S acidic ribosomal protein P0 [Medicago truncatula]
           gi|355501232|gb|AES82435.1| 60S acidic ribosomal protein
           P0 [Medicago truncatula]
          Length = 203

 Score =  208 bits (529), Expect = 4e-52
 Identities = 108/145 (74%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
 Frame = -2

Query: 432 GIRRALHADSVVVMGKNSLMKRSITQVAQKTGNN-AFLNLVPLLVGNVALVFTKADLREV 256
           GIRRALH DSVVVMGKNSLMK SI Q A+KTGNN AFLNL PLLVGN             
Sbjct: 39  GIRRALHEDSVVVMGKNSLMKHSINQAAEKTGNNDAFLNLGPLLVGNFL----------- 87

Query: 255 SKQVAKYKVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGLTCCQQQSSQASEPFLVCSKF 76
                  KVVNPILMCPKYMSYDSY TCS+MQSGQLPLGLTCC QQSSQASEPFL+CSKF
Sbjct: 88  -------KVVNPILMCPKYMSYDSYKTCSFMQSGQLPLGLTCCNQQSSQASEPFLICSKF 140

Query: 75  SPAQHCFMMRSRQFLTTSIWAPFLL 1
           +P QHC+MMRSRQFL TSI +PFLL
Sbjct: 141 TPPQHCYMMRSRQFLLTSILSPFLL 165


Top