BLASTX nr result
ID: Glycyrrhiza24_contig00018399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00018399
(594 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi... 327 9e-88
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 312 3e-83
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 311 4e-83
ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ... 311 4e-83
emb|CBI26570.3| unnamed protein product [Vitis vinifera] 311 4e-83
>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 327 bits (838), Expect = 9e-88
Identities = 163/197 (82%), Positives = 178/197 (90%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
IF RAESS +G+ VQVYNAMMGVYARNGRF+KV+E+LD+MRERGC PDLVSFNTLINAR+
Sbjct: 237 IFARAESS-VGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARM 295
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
KS AM P LALQLLNE+R SG+ PDIITYNTL+S CSRESNLEEA+ VF+DME HRCQPD
Sbjct: 296 KSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPD 355
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
LWTYNAMISVYGRC A KAE LF+ELESKGF PDAVTYNSLLYAFS+EGNTEKVR ICE
Sbjct: 356 LWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICE 415
Query: 543 EMVKMGFGKDEMTYNTI 593
EMVK GFG+DEMTYNTI
Sbjct: 416 EMVKRGFGQDEMTYNTI 432
Score = 105 bits (263), Expect = 4e-21
Identities = 58/197 (29%), Positives = 100/197 (50%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
+F ES YN+++ ++R G KV+++ + M +RG D +++NT+I+
Sbjct: 378 LFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYG 437
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
K A+Q+ +M+ SG PD +TY L+ + S +EEA +V ++M +P
Sbjct: 438 KQGRH--DQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPT 495
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
L TY+A+I Y + G +AE F + G PD + Y+ +L F + +K G+
Sbjct: 496 LHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYH 555
Query: 543 EMVKMGFGKDEMTYNTI 593
EM++ GF D Y +
Sbjct: 556 EMIREGFTPDNGLYEVM 572
Score = 87.4 bits (215), Expect = 2e-15
Identities = 48/175 (27%), Positives = 92/175 (52%)
Frame = +3
Query: 33 GEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKSCAMVPGLA 212
G+ YN ++ +Y + GR ++ ++ M+ G PD V++ LI++ K+ + A
Sbjct: 423 GQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEE--A 480
Query: 213 LQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISV 392
+++EM D+G+ P + TY+ L+ ++ EEA + FN M + +PD Y+ M+
Sbjct: 481 ANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDF 540
Query: 393 YGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICEEMVKM 557
+ R KA L+ E+ +GF+PD Y +++A +E + V I +M ++
Sbjct: 541 FLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEEL 595
Score = 77.0 bits (188), Expect = 2e-12
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 5/191 (2%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
I+ +++ + VY M+ + + R V+ ML M E G +PDL N+++ +
Sbjct: 901 IYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYL 960
Query: 183 -----KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKH 347
KS ++ +++D+ L PD TYNTL+ R+ EE + N M
Sbjct: 961 GIEDFKSMGII-------YQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSL 1013
Query: 348 RCQPDLWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKV 527
+P L TY ++I+ + + + +AE LF EL S G+ D Y+ ++ + G+ K
Sbjct: 1014 GLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKA 1073
Query: 528 RGICEEMVKMG 560
+ M + G
Sbjct: 1074 ENLLAIMKESG 1084
Score = 73.6 bits (179), Expect = 2e-11
Identities = 44/192 (22%), Positives = 93/192 (48%)
Frame = +3
Query: 18 ESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKSCAM 197
E + +Q+ N+++ +Y F + + +++ +PD ++NTLI +
Sbjct: 941 EEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRP 1000
Query: 198 VPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYN 377
G +L +N+MR GL P + TY +L++ +++ E+A ++F ++ + + D Y+
Sbjct: 1001 EEGFSL--MNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYH 1058
Query: 378 AMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICEEMVKM 557
M+ Y G KAE L ++ G P T + L+ ++ K G E+ + + +
Sbjct: 1059 LMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTT 1118
Query: 558 GFGKDEMTYNTI 593
G D + Y+++
Sbjct: 1119 GVVLDTLPYSSV 1130
Score = 65.5 bits (158), Expect = 7e-09
Identities = 44/190 (23%), Positives = 94/190 (49%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
I+ + + +++ + YN ++ +Y R+ R + +++ MR G EP L ++ +LI A
Sbjct: 971 IYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFN 1030
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
K + A +L E+R +G D Y+ ++ + +A ++ M++ +P
Sbjct: 1031 KQ--RMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPT 1088
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
+ T + ++ YG+ G +AE + + L + G D + Y+S++ A+ K+G+ +
Sbjct: 1089 ISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLT 1148
Query: 543 EMVKMGFGKD 572
EM + G D
Sbjct: 1149 EMKEAGIEPD 1158
Score = 64.3 bits (155), Expect = 1e-08
Identities = 44/183 (24%), Positives = 83/183 (45%)
Frame = +3
Query: 45 QVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKSCAMVPGLALQLL 224
+V+NA++ YA +G + + + + + M G P + S N L+ A + + ++
Sbjct: 810 KVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRL--NELYVVI 867
Query: 225 NEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISVYGRC 404
E++D GL + L ++ NL E ++N M+ P + Y M+ + +C
Sbjct: 868 QELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKC 927
Query: 405 GLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICEEMVKMGFGKDEMTY 584
E + E+E GF PD NS+L + + + + I +++ DE TY
Sbjct: 928 KRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETY 987
Query: 585 NTI 593
NT+
Sbjct: 988 NTL 990
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 312 bits (799), Expect = 3e-83
Identities = 152/197 (77%), Positives = 173/197 (87%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
IF RAE+ A G VQVYNAMMGVYAR GRF KVQE+LD+MR RGCEPDLVSFNTLINAR+
Sbjct: 242 IFARAEA-AXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARL 300
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
KS MV LA++LLNE+R SG+ PDIITYNTL+S CSRESNLEEA+ V+NDM HRCQPD
Sbjct: 301 KSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 360
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
LWTYNAMISVYGRCG++ +A LF++LESKGF PDAVTYNSLLYAF++EGN +KV+ ICE
Sbjct: 361 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 420
Query: 543 EMVKMGFGKDEMTYNTI 593
+MVKMGFGKDEMTYNTI
Sbjct: 421 DMVKMGFGKDEMTYNTI 437
Score = 94.0 bits (232), Expect = 2e-17
Identities = 57/197 (28%), Positives = 99/197 (50%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
+F ES YN+++ +AR G +KV+E+ + M + G D +++NT+I+
Sbjct: 383 LFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYG 442
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
K LA QL ++M+ SG PD +TY L+ + + ++EA +V ++M +P
Sbjct: 443 KRGQH--DLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPT 500
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
L T++A+I Y + G V+AE F + G PD + Y+ +L + + K + +
Sbjct: 501 LRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQ 560
Query: 543 EMVKMGFGKDEMTYNTI 593
EMV F D Y +
Sbjct: 561 EMVLHSFKPDHALYEVM 577
Score = 82.4 bits (202), Expect = 5e-14
Identities = 47/184 (25%), Positives = 94/184 (51%)
Frame = +3
Query: 42 VQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKSCAMVPGLALQL 221
+ ++N+++ +Y G F K ++ +++E G +PD ++NTLI + GL+L
Sbjct: 954 LSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSL-- 1011
Query: 222 LNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISVYGR 401
++EMR GL P + TY +L+S + +E+A ++F + C+ D Y+ M+ ++
Sbjct: 1012 MHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRN 1071
Query: 402 CGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICEEMVKMGFGKDEMT 581
G KAE L ++ G P T + L+ ++S G E+ + + + G +
Sbjct: 1072 SGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLP 1131
Query: 582 YNTI 593
Y+++
Sbjct: 1132 YSSV 1135
Score = 77.4 bits (189), Expect = 2e-12
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Frame = +3
Query: 42 VQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVK-SCAMVPGLALQ 218
+ +Y M+G+ A+ R V+ M+ M +PDL +N+++ G Q
Sbjct: 919 MHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQ 978
Query: 219 LLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISVYG 398
L+ E +GL PD TYNTL+ R+ EE + + ++M + +P L TY ++IS +G
Sbjct: 979 LIQE---AGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFG 1035
Query: 399 RCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGN---TEKVRGICEE 545
+ + +AE LF L SK D Y+ ++ F GN EK+ G+ +E
Sbjct: 1036 KLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKE 1087
Score = 57.4 bits (137), Expect = 2e-06
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Frame = +3
Query: 57 AMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKSCAMVPGLALQLLNEMR 236
+++G Y +GR + +E+LD +RE + LI K+ + G AL+ + R
Sbjct: 642 SILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQL--GDALREYGKAR 699
Query: 237 DSGLMPDIIT-YNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISVYGRCGLA 413
D GL T Y +LL C EA +F+DM + +P Y +M+ Y + G
Sbjct: 700 DFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFP 759
Query: 414 VKAELLFRELESKGFSPDAVT-YNSLLYAFSK 506
A L + E KG D V+ + ++ A+ K
Sbjct: 760 ETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGK 791
Score = 56.6 bits (135), Expect = 3e-06
Identities = 41/216 (18%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Frame = +3
Query: 45 QVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKS------------ 188
+V+NA++ YA +G + + + + + M G P + S N L+ A +
Sbjct: 815 KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 874
Query: 189 -------------CAMVPGLA--------LQLLNEMRDSGLMPDIITYNTLLSPCSRESN 305
M+ A ++ M+ +G P + Y ++ ++
Sbjct: 875 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKR 934
Query: 306 LEEAIDVFNDMEKHRCQPDLWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNS 485
+ + + ++ME +PDL +N+++ +Y G K +++ ++ G PD TYN+
Sbjct: 935 VRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNT 994
Query: 486 LLYAFSKEGNTEKVRGICEEMVKMGFGKDEMTYNTI 593
L+ + ++ E+ + EM ++G TY ++
Sbjct: 995 LILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSL 1030
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 311 bits (798), Expect = 4e-83
Identities = 151/197 (76%), Positives = 174/197 (88%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
IF RAE+++ G VQVYNAMMGVYAR GRF KVQE+LD+MR RGCEPDLVSFNTLINAR+
Sbjct: 210 IFARAEAAS-GNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARL 268
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
KS MV LA++LLNE+R SG+ PDIITYNTL+S CSRESNLEEA+ V+NDM HRCQPD
Sbjct: 269 KSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 328
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
LWTYNAMISVYGRCG++ +A LF++LESKGF PDAVTYNSLLYAF++EGN +KV+ ICE
Sbjct: 329 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 388
Query: 543 EMVKMGFGKDEMTYNTI 593
+MVKMGFGKDEMTYNTI
Sbjct: 389 DMVKMGFGKDEMTYNTI 405
Score = 96.3 bits (238), Expect = 4e-18
Identities = 58/197 (29%), Positives = 100/197 (50%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
+F ES YN+++ +AR G +KV+E+ + M + G D +++NT+I+
Sbjct: 351 LFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYG 410
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
K LA QL ++M+ SG PD +TY L+ + + ++EA +V ++M R +P
Sbjct: 411 KRGQH--DLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPT 468
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
L T++A+I Y + G V+AE F + G PD + Y+ +L + + K + +
Sbjct: 469 LRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQ 528
Query: 543 EMVKMGFGKDEMTYNTI 593
EMV F D Y +
Sbjct: 529 EMVLHSFKPDHALYEVM 545
Score = 82.4 bits (202), Expect = 5e-14
Identities = 47/184 (25%), Positives = 94/184 (51%)
Frame = +3
Query: 42 VQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKSCAMVPGLALQL 221
+ ++N+++ +Y G F K ++ +++E G +PD ++NTLI + GL+L
Sbjct: 922 LSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSL-- 979
Query: 222 LNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISVYGR 401
++EMR GL P + TY +L+S + +E+A ++F + C+ D Y+ M+ ++
Sbjct: 980 MHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRN 1039
Query: 402 CGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICEEMVKMGFGKDEMT 581
G KAE L ++ G P T + L+ ++S G E+ + + + G +
Sbjct: 1040 SGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLP 1099
Query: 582 YNTI 593
Y+++
Sbjct: 1100 YSSV 1103
Score = 77.0 bits (188), Expect = 2e-12
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Frame = +3
Query: 42 VQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVK-SCAMVPGLALQ 218
+ +Y M+G+ A+ R V+ M+ M +PDL +N+++ G Q
Sbjct: 887 MHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQ 946
Query: 219 LLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISVYG 398
L+ E +GL PD TYNTL+ R+ EE + + ++M + +P L TY ++IS +G
Sbjct: 947 LIQE---AGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFG 1003
Query: 399 RCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGN---TEKVRGICEE 545
+ + +AE LF L SK D Y+ ++ F GN EK+ G+ +E
Sbjct: 1004 KLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKE 1055
Score = 58.9 bits (141), Expect = 6e-07
Identities = 42/216 (19%), Positives = 92/216 (42%), Gaps = 33/216 (15%)
Frame = +3
Query: 45 QVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKS------------ 188
+V+NA++ YA +G + + + + + M G P + S N L+ A +
Sbjct: 783 KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 842
Query: 189 -------------CAMVPGLA--------LQLLNEMRDSGLMPDIITYNTLLSPCSRESN 305
M+ A ++ M+ +G P + Y ++ ++
Sbjct: 843 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKR 902
Query: 306 LEEAIDVFNDMEKHRCQPDLWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNS 485
+ + + ++ME R +PDL +N+++ +Y G K +++ ++ G PD TYN+
Sbjct: 903 VRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNT 962
Query: 486 LLYAFSKEGNTEKVRGICEEMVKMGFGKDEMTYNTI 593
L+ + ++ E+ + EM ++G TY ++
Sbjct: 963 LILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSL 998
Score = 57.4 bits (137), Expect = 2e-06
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Frame = +3
Query: 57 AMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKSCAMVPGLALQLLNEMR 236
+++G Y +GR + +E+LD +RE + LI K+ + G AL+ + R
Sbjct: 610 SILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQL--GDALREYGKAR 667
Query: 237 DSGLMPDIIT-YNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISVYGRCGLA 413
D GL T Y +LL C EA +F+DM + +P Y +M+ Y + G
Sbjct: 668 DFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFP 727
Query: 414 VKAELLFRELESKGFSPDAVT-YNSLLYAFSK 506
A L + E KG D V+ + ++ A+ K
Sbjct: 728 ETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGK 759
>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 311 bits (798), Expect = 4e-83
Identities = 155/197 (78%), Positives = 172/197 (87%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
IF +AES I + VQVYNAMMGVYARNG F KV EM ++MRERGCEPD+VSFNTLINA+V
Sbjct: 252 IFAKAES-VIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKV 310
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
KSCA V GLA++LL+E+ GL PDIITYNTL+S CSRESNL+EAI VF+ ME +RCQPD
Sbjct: 311 KSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPD 370
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
LWTYNAMISVYGRCG A+KAE LF +L+S GFSPDAVTYNSLLYAFSKEGNTEKVR I E
Sbjct: 371 LWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISE 430
Query: 543 EMVKMGFGKDEMTYNTI 593
EMVKMGFGKDEMTYNTI
Sbjct: 431 EMVKMGFGKDEMTYNTI 447
Score = 99.0 bits (245), Expect = 5e-19
Identities = 55/197 (27%), Positives = 100/197 (50%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
+F + +S+ YN+++ +++ G KV+++ + M + G D +++NT+I+
Sbjct: 393 LFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYG 452
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
K AL+L +M+ SG PD +TY L+ + S +EEA V ++M +P
Sbjct: 453 KHGRHDE--ALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPT 510
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
L TY+A+I Y + G V+AE F + G D + Y+ +L F + +K + +
Sbjct: 511 LHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQ 570
Query: 543 EMVKMGFGKDEMTYNTI 593
EM++ GF D Y +
Sbjct: 571 EMIEAGFTPDTGLYEVM 587
Score = 85.1 bits (209), Expect = 8e-15
Identities = 53/184 (28%), Positives = 93/184 (50%)
Frame = +3
Query: 42 VQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKSCAMVPGLALQL 221
+ +Y M+G+ R R V+ ML M E G +PDL FN+++ S + + +
Sbjct: 929 MHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKL-YSSIEEFQNMGV-I 986
Query: 222 LNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISVYGR 401
++D+GL PD TYNTL++ R+ EE + + + M+ +P TY +MI+ + +
Sbjct: 987 YQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSK 1046
Query: 402 CGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICEEMVKMGFGKDEMT 581
L +AE LF EL S G+ D Y+ ++ + G+ +K + E M + G + T
Sbjct: 1047 QQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTAT 1106
Query: 582 YNTI 593
+ +
Sbjct: 1107 MHLL 1110
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/176 (25%), Positives = 90/176 (51%)
Frame = +3
Query: 33 GEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARVKSCAMVPGLA 212
G+ YN ++ +Y ++GR ++ + M+ G PD V++ LI+ K+ + A
Sbjct: 438 GKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEE--A 495
Query: 213 LQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPDLWTYNAMISV 392
++++EM D+G+ P + TY+ L+ ++ EA + FN M + + D Y+ M+
Sbjct: 496 SKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDF 555
Query: 393 YGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICEEMVKMG 560
+ R KA L++E+ GF+PD Y +L A +E + + + ++ ++G
Sbjct: 556 FLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELG 611
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/173 (20%), Positives = 86/173 (49%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
I+ + + + + YN ++ +Y R+ R + ++ M+ G EP ++ ++I A
Sbjct: 986 IYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFS 1045
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
K + A +L E+R +G D Y+ ++ + ++A ++ M++ +P+
Sbjct: 1046 KQ--QLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPN 1103
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTE 521
T + ++ YG+ G +A+ + + L + G D + Y+S++ A+ K+G+ +
Sbjct: 1104 TATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAK 1156
>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 311 bits (798), Expect = 4e-83
Identities = 151/197 (76%), Positives = 174/197 (88%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
IF RAE+++ G VQVYNAMMGVYAR GRF KVQE+LD+MR RGCEPDLVSFNTLINAR+
Sbjct: 185 IFARAEAAS-GNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARL 243
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
KS MV LA++LLNE+R SG+ PDIITYNTL+S CSRESNLEEA+ V+NDM HRCQPD
Sbjct: 244 KSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 303
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
LWTYNAMISVYGRCG++ +A LF++LESKGF PDAVTYNSLLYAF++EGN +KV+ ICE
Sbjct: 304 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 363
Query: 543 EMVKMGFGKDEMTYNTI 593
+MVKMGFGKDEMTYNTI
Sbjct: 364 DMVKMGFGKDEMTYNTI 380
Score = 96.3 bits (238), Expect = 4e-18
Identities = 58/197 (29%), Positives = 100/197 (50%)
Frame = +3
Query: 3 IFTRAESSAIGEQVQVYNAMMGVYARNGRFNKVQEMLDVMRERGCEPDLVSFNTLINARV 182
+F ES YN+++ +AR G +KV+E+ + M + G D +++NT+I+
Sbjct: 326 LFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYG 385
Query: 183 KSCAMVPGLALQLLNEMRDSGLMPDIITYNTLLSPCSRESNLEEAIDVFNDMEKHRCQPD 362
K LA QL ++M+ SG PD +TY L+ + + ++EA +V ++M R +P
Sbjct: 386 KRGQH--DLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPT 443
Query: 363 LWTYNAMISVYGRCGLAVKAELLFRELESKGFSPDAVTYNSLLYAFSKEGNTEKVRGICE 542
L T++A+I Y + G V+AE F + G PD + Y+ +L + + K + +
Sbjct: 444 LRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQ 503
Query: 543 EMVKMGFGKDEMTYNTI 593
EMV F D Y +
Sbjct: 504 EMVLHSFKPDHALYEVM 520