BLASTX nr result

ID: Glycyrrhiza24_contig00018396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018396
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like ...   109   3e-22
emb|CBI30096.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...    60   3e-07

>ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like [Glycine max]
          Length = 1316

 Score =  109 bits (272), Expect = 3e-22
 Identities = 66/113 (58%), Positives = 79/113 (69%), Gaps = 5/113 (4%)
 Frame = -2

Query: 531  REGFNVDTNSEDHSESNTVSDEADGEVIDAGTEETNTLSLNGKSQSKPVSEAYSGASSEL 352
            REGF V  NSEDH  SN+ S+   GE+IDA TEE  T+ LN +S+SK VSE++SGASSEL
Sbjct: 1214 REGFTVTINSEDHLSSNSSSE---GEIIDAYTEEA-TMPLNERSESKLVSESHSGASSEL 1269

Query: 351  IESDQG-----DIEVQSPCIKTRGAQRSRTKKSNVKDGKGDISVTNKRSTRSR 208
             ESDQG     DIE+QSP +KT+G QRSRT KSNVK G        KR+ RS+
Sbjct: 1270 TESDQGDIETRDIEIQSPQVKTKGVQRSRTNKSNVKGG-------TKRTIRSK 1315


>emb|CBI30096.3| unnamed protein product [Vitis vinifera]
          Length = 1290

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
 Frame = -2

Query: 528  EGFNVD-TNSEDHSESNTVSDEADGEVIDAGTEETNTLSLNGKSQSKPVS-EAYSGASSE 355
            E   VD + +E+  E++ V D   GEVID   +   T SLN  S+S+    E YS  SSE
Sbjct: 1163 ESLMVDGSTAEECQEADVVED---GEVIDPSLKGM-TQSLNDVSKSRTSKVEEYSDVSSE 1218

Query: 354  LIESDQGDIEVQSPCIKTRGAQRSRTKKSNVKDGKGD--ISVTNKRSTRS 211
            +IES+QG+ E+QS  +  RG+ +SR KK+N+KD K D   S++ +R+ RS
Sbjct: 1219 VIESEQGESEIQSAKVHLRGSSKSRGKKTNMKDQKRDTSTSMSTRRNLRS 1268


>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
            condensin, putative [Ricinus communis]
          Length = 1346

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
 Frame = -2

Query: 507  NSEDHSESNTVSDEADGEVIDAGTEETNTLSLNGKSQSKPV--------SEAYSGASSEL 352
            N  +  E + +++  DGEVID         S+ G SQSK V        S+  SG SSEL
Sbjct: 1244 NEGEECEGSNINE--DGEVIDP--------SMEGISQSKNVVPDIKLDDSDGNSGISSEL 1293

Query: 351  IESDQGDIE-VQSPCI--KTRGAQRSRTKKSNVKDGKGDISVTNKRSTRSR 208
             E++ G+ E VQSP +  K  G  RSR KKSN  D K  +S + +R TRS+
Sbjct: 1294 TETELGETEEVQSPRVTRKGTGTSRSRAKKSNTIDHKSGVSASTRRYTRSK 1344


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