BLASTX nr result
ID: Glycyrrhiza24_contig00018396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00018396 (532 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like ... 109 3e-22 emb|CBI30096.3| unnamed protein product [Vitis vinifera] 67 2e-09 ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22... 60 3e-07 >ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like [Glycine max] Length = 1316 Score = 109 bits (272), Expect = 3e-22 Identities = 66/113 (58%), Positives = 79/113 (69%), Gaps = 5/113 (4%) Frame = -2 Query: 531 REGFNVDTNSEDHSESNTVSDEADGEVIDAGTEETNTLSLNGKSQSKPVSEAYSGASSEL 352 REGF V NSEDH SN+ S+ GE+IDA TEE T+ LN +S+SK VSE++SGASSEL Sbjct: 1214 REGFTVTINSEDHLSSNSSSE---GEIIDAYTEEA-TMPLNERSESKLVSESHSGASSEL 1269 Query: 351 IESDQG-----DIEVQSPCIKTRGAQRSRTKKSNVKDGKGDISVTNKRSTRSR 208 ESDQG DIE+QSP +KT+G QRSRT KSNVK G KR+ RS+ Sbjct: 1270 TESDQGDIETRDIEIQSPQVKTKGVQRSRTNKSNVKGG-------TKRTIRSK 1315 >emb|CBI30096.3| unnamed protein product [Vitis vinifera] Length = 1290 Score = 67.0 bits (162), Expect = 2e-09 Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 4/110 (3%) Frame = -2 Query: 528 EGFNVD-TNSEDHSESNTVSDEADGEVIDAGTEETNTLSLNGKSQSKPVS-EAYSGASSE 355 E VD + +E+ E++ V D GEVID + T SLN S+S+ E YS SSE Sbjct: 1163 ESLMVDGSTAEECQEADVVED---GEVIDPSLKGM-TQSLNDVSKSRTSKVEEYSDVSSE 1218 Query: 354 LIESDQGDIEVQSPCIKTRGAQRSRTKKSNVKDGKGD--ISVTNKRSTRS 211 +IES+QG+ E+QS + RG+ +SR KK+N+KD K D S++ +R+ RS Sbjct: 1219 VIESEQGESEIQSAKVHLRGSSKSRGKKTNMKDQKRDTSTSMSTRRNLRS 1268 >ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1| condensin, putative [Ricinus communis] Length = 1346 Score = 59.7 bits (143), Expect = 3e-07 Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 11/111 (9%) Frame = -2 Query: 507 NSEDHSESNTVSDEADGEVIDAGTEETNTLSLNGKSQSKPV--------SEAYSGASSEL 352 N + E + +++ DGEVID S+ G SQSK V S+ SG SSEL Sbjct: 1244 NEGEECEGSNINE--DGEVIDP--------SMEGISQSKNVVPDIKLDDSDGNSGISSEL 1293 Query: 351 IESDQGDIE-VQSPCI--KTRGAQRSRTKKSNVKDGKGDISVTNKRSTRSR 208 E++ G+ E VQSP + K G RSR KKSN D K +S + +R TRS+ Sbjct: 1294 TETELGETEEVQSPRVTRKGTGTSRSRAKKSNTIDHKSGVSASTRRYTRSK 1344