BLASTX nr result
ID: Glycyrrhiza24_contig00018373
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00018373
(1774 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containi... 869 0.0
ref|XP_003614316.1| Pentatricopeptide repeat-containing protein ... 864 0.0
ref|XP_003619886.1| Pentatricopeptide repeat-containing protein ... 801 0.0
ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|2... 696 0.0
ref|XP_002515072.1| pentatricopeptide repeat-containing protein,... 685 0.0
>ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05600-like
[Glycine max]
Length = 502
Score = 869 bits (2245), Expect = 0.0
Identities = 426/503 (84%), Positives = 465/503 (92%)
Frame = +2
Query: 161 MSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSGR 340
MS+RWPRVLTPTYLSQII+TQKNPLKAL+IFNEAK RYP Y HNGP YATMI+ILGTSGR
Sbjct: 1 MSIRWPRVLTPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGR 60
Query: 341 ITEMRGVIEQMREDSCECKDSVFVSAIKTYVKAGLVDEAISLYKNIPQFNCVNWTESFNT 520
+ EMR VIEQM+EDSCECKDSVFVS IKTY AGLVDEAISLYK+IP+FNCVNWTESFNT
Sbjct: 61 LNEMRDVIEQMKEDSCECKDSVFVSVIKTYANAGLVDEAISLYKSIPRFNCVNWTESFNT 120
Query: 521 LLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDYQ 700
+LQIMV ENRLE AHRLFVESSCGW+V+S ++ALNLLMYALCQKSRSDLALQ+FQEMDYQ
Sbjct: 121 MLQIMVKENRLEIAHRLFVESSCGWEVRSLVRALNLLMYALCQKSRSDLALQLFQEMDYQ 180
Query: 701 GCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNGK 880
CYPNRDSYAILMKGLCQD+RLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCD GK
Sbjct: 181 SCYPNRDSYAILMKGLCQDRRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDAGK 240
Query: 881 FEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSYN 1060
FEEA EILGKILRKGLKAPKRC+++LDL SDGKDIE AKR+IH+AL++GSVPSL SYN
Sbjct: 241 FEEAEEILGKILRKGLKAPKRCHSRLDLDQLSDGKDIESAKRMIHEALIKGSVPSLASYN 300
Query: 1061 AMAVDLYSEGKIGEADEVIVEMRGKGFKPTHSIFEAKVAALCKVGKVDEAIKVIEEDMVE 1240
AMAVDLYSEGKI EAD+VI+EM+ +GFKPTHSIFEAKVAALCKV KVDEAIKVIEEDMV+
Sbjct: 301 AMAVDLYSEGKIDEADKVIIEMQVRGFKPTHSIFEAKVAALCKVSKVDEAIKVIEEDMVK 360
Query: 1241 VNCLPTGRVYNILLKNLCNNVGNSTAVLESLNKMSRKLGCKGDGETYSILLEMLCHERKY 1420
VNCLPT +VYNILLKNLC NVGNSTA+LESLNKMS K+GC GD +TYSILLEMLC ER+Y
Sbjct: 361 VNCLPTAKVYNILLKNLC-NVGNSTAILESLNKMSSKVGCTGDRDTYSILLEMLCGERRY 419
Query: 1421 LEASQLLEQMSIKSYWPCASSYNLLIKGLCSHGRQYEAVMWLEDMISQGKVPEISVWNSL 1600
LEASQLLE+MSIKSYWPC +SYN LI+GLCS GRQYEAVMWLEDMISQGK+PEISVWNSL
Sbjct: 420 LEASQLLEKMSIKSYWPCTNSYNSLIRGLCSIGRQYEAVMWLEDMISQGKLPEISVWNSL 479
Query: 1601 ASSFCNTGMMNVSCETSNRLRSL 1669
AS FCN+ + VS ET +RLRSL
Sbjct: 480 ASLFCNSEKIKVSSETFSRLRSL 502
>ref|XP_003614316.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515651|gb|AES97274.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 504
Score = 864 bits (2233), Expect = 0.0
Identities = 423/504 (83%), Positives = 458/504 (90%)
Frame = +2
Query: 158 SMSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSG 337
SMS+RWPRVL PTYL+QIIRTQKNPLKAL IFNEAK +YPKYSHNGP YATMI ILGTSG
Sbjct: 2 SMSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKLKYPKYSHNGPVYATMINILGTSG 61
Query: 338 RITEMRGVIEQMREDSCECKDSVFVSAIKTYVKAGLVDEAISLYKNIPQFNCVNWTESFN 517
R+ EM +IEQM+EDSCECKDSVFVSAIKTY K GLVDEAISLYKNIPQFNCVNWT+SFN
Sbjct: 62 RLKEMSDLIEQMKEDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFN 121
Query: 518 TLLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDY 697
TLL+IMVNEN+LE AH LFVESSCGW+VKSR+QALNLLMYALC+KSRSDLALQIFQEMDY
Sbjct: 122 TLLEIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDY 181
Query: 698 QGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNG 877
QGCYPNR+SY I+MKGLCQDKRLHEATHLLYSMFWRIS KGNGEDIV+YRTLLDALCDNG
Sbjct: 182 QGCYPNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNG 241
Query: 878 KFEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSY 1057
KF+EA+EILGKILRKGLKAPKRCYN+LD+ C DGKD E KR IH+ALVRGSVPS SY
Sbjct: 242 KFDEAVEILGKILRKGLKAPKRCYNRLDISQCGDGKDAEVTKRWIHEALVRGSVPSTASY 301
Query: 1058 NAMAVDLYSEGKIGEADEVIVEMRGKGFKPTHSIFEAKVAALCKVGKVDEAIKVIEEDMV 1237
+MAVDLY EGKI EAD+VI+EM+ + FKP HSIFEAKVAALCKVGKVDEAIKVIEEDMV
Sbjct: 302 TSMAVDLYEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCKVGKVDEAIKVIEEDMV 361
Query: 1238 EVNCLPTGRVYNILLKNLCNNVGNSTAVLESLNKMSRKLGCKGDGETYSILLEMLCHERK 1417
EVNCLP VY ILLKNL VGNST+VLESLNKMS+K+ C D ETY ILLEMLC ERK
Sbjct: 362 EVNCLPNATVYTILLKNL-GGVGNSTSVLESLNKMSKKVNCMADKETYCILLEMLCRERK 420
Query: 1418 YLEASQLLEQMSIKSYWPCASSYNLLIKGLCSHGRQYEAVMWLEDMISQGKVPEISVWNS 1597
YLEASQLLEQMSIKSYWPCA++YNLLI+GLCS GRQYEAVMWLEDMISQGK+PEISVWNS
Sbjct: 421 YLEASQLLEQMSIKSYWPCANTYNLLIEGLCSLGRQYEAVMWLEDMISQGKLPEISVWNS 480
Query: 1598 LASSFCNTGMMNVSCETSNRLRSL 1669
LASSFCN+GMM VS ET +R+RSL
Sbjct: 481 LASSFCNSGMMKVSTETFDRIRSL 504
>ref|XP_003619886.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494901|gb|AES76104.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 576
Score = 801 bits (2070), Expect = 0.0
Identities = 397/500 (79%), Positives = 436/500 (87%)
Frame = +2
Query: 161 MSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSGR 340
MS+RWPRVL PTYL+QIIRTQKNPLKAL IFNEAK +YP YSHNGP YATMI ILGTSGR
Sbjct: 1 MSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKSKYPNYSHNGPVYATMINILGTSGR 60
Query: 341 ITEMRGVIEQMREDSCECKDSVFVSAIKTYVKAGLVDEAISLYKNIPQFNCVNWTESFNT 520
+ EM +IEQM+EDS LVDEAISLYKNIPQFNCVNWT+SFNT
Sbjct: 61 LKEMSDLIEQMKEDSW------------------LVDEAISLYKNIPQFNCVNWTQSFNT 102
Query: 521 LLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDYQ 700
LL+IMVNEN+LE AH LFVESSCGW+VKSR+QALNLLMYALC+KSRSDLALQIFQEMDYQ
Sbjct: 103 LLKIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQ 162
Query: 701 GCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNGK 880
CYPNR+SY I+MKGLCQDKRLHEATHLLYSMFWRIS KGNGEDIV+YRTLLDALCDNGK
Sbjct: 163 DCYPNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNGK 222
Query: 881 FEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSYN 1060
F+EA+EILGKILRKGLKAPKRCYN+LD+ C DGKD+E KR IH+ALVRGSVPS SY
Sbjct: 223 FDEAVEILGKILRKGLKAPKRCYNRLDITQCGDGKDVEVTKRWIHEALVRGSVPSTASYT 282
Query: 1061 AMAVDLYSEGKIGEADEVIVEMRGKGFKPTHSIFEAKVAALCKVGKVDEAIKVIEEDMVE 1240
+MAVDLY EGKI EAD+VI+EM+ + F+P HSIFEAKVAALCKVGKVDEAIKVIEEDMVE
Sbjct: 283 SMAVDLYEEGKIDEADKVIIEMKDRRFRPKHSIFEAKVAALCKVGKVDEAIKVIEEDMVE 342
Query: 1241 VNCLPTGRVYNILLKNLCNNVGNSTAVLESLNKMSRKLGCKGDGETYSILLEMLCHERKY 1420
VNCLP RVY ILLKN+ +VGNST+VLESLNKMS+K+ C D ETY ILLEMLC E KY
Sbjct: 343 VNCLPNARVYTILLKNI-RSVGNSTSVLESLNKMSKKVNCMADKETYCILLEMLCREGKY 401
Query: 1421 LEASQLLEQMSIKSYWPCASSYNLLIKGLCSHGRQYEAVMWLEDMISQGKVPEISVWNSL 1600
L+ASQLLEQMSIKSYWP A+SYNLLI+GLCS GRQYEAVMWLEDMISQGK+PEISVWNSL
Sbjct: 402 LQASQLLEQMSIKSYWPSANSYNLLIEGLCSLGRQYEAVMWLEDMISQGKLPEISVWNSL 461
Query: 1601 ASSFCNTGMMNVSCETSNRL 1660
ASSFCN+GMM VS ET N++
Sbjct: 462 ASSFCNSGMMKVSAETFNQM 481
>ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|222843166|gb|EEE80713.1|
predicted protein [Populus trichocarpa]
Length = 503
Score = 696 bits (1795), Expect = 0.0
Identities = 336/503 (66%), Positives = 418/503 (83%), Gaps = 1/503 (0%)
Frame = +2
Query: 161 MSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSGR 340
MS+RWPR+LTPT LSQI+R+QKNPL AL IF +AK +YP Y HNGP YATMI+ILG S R
Sbjct: 1 MSIRWPRLLTPTQLSQILRSQKNPLTALQIFKDAKDKYPSYHHNGPVYATMISILGNSDR 60
Query: 341 ITEMRGVIEQMREDSCECKDSVFVSAIKTYVKAGLVDEAISLYKNIPQFNCVNWTESFNT 520
I EM+ VI+QMR+DSCECKDSVFV+AIKTY AG + EA+SL+KNIP+FNCVNWTESFNT
Sbjct: 61 IAEMKEVIDQMRDDSCECKDSVFVTAIKTYASAGQISEAVSLFKNIPKFNCVNWTESFNT 120
Query: 521 LLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDYQ 700
LLQI+V E++LE AHR F+E+SCGW+VKSRI+ALNLL+ LCQ++RSDLALQIFQEMDYQ
Sbjct: 121 LLQILVKESKLETAHRFFLENSCGWEVKSRIRALNLLLDVLCQRNRSDLALQIFQEMDYQ 180
Query: 701 GCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNGK 880
GCYPNRDSY ILM+GLC+D RL+EATHLLYSMFWRISQKG+GEDIVVYRTLLDALCDNG+
Sbjct: 181 GCYPNRDSYRILMRGLCEDGRLNEATHLLYSMFWRISQKGSGEDIVVYRTLLDALCDNGQ 240
Query: 881 FEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSYN 1060
EEAMEILGKILRKGLKAPKR ++LDL C++ +DIE K LI++AL+RG VPSL SY
Sbjct: 241 VEEAMEILGKILRKGLKAPKRYRHRLDLSQCNNCEDIEATKLLINEALIRGGVPSLASYT 300
Query: 1061 AMAVDLYSEGKIGEADEVIVEMRGKGFKPTHSIFEAKVAALCKVGKVDEAIKVIEEDMVE 1240
AMAVDLY EGK G+AD+V+ E + +G++P+ +EAKV ALC+ G+ EAI VIE +MVE
Sbjct: 301 AMAVDLYCEGKTGQADKVLDETQERGYRPSLRTYEAKVTALCRQGRSGEAINVIEREMVE 360
Query: 1241 VNCLPTGRVYNILLKNLCNNVGNSTAVLESLNKMSRKLGCKGDGETYSILLEMLCHERKY 1420
N +P R+YN+LLK LC + GNS + L +M++++GC + ETY IL++ LC + ++
Sbjct: 361 RNSVPNVRLYNVLLKGLC-DAGNSAIAVSYLKRMAKQVGCVANQETYGILVDGLCRDGRF 419
Query: 1421 LEASQLLEQMSIKSYWPCASSYNLLIKGLCSHGRQYEAVMWLEDMISQGKVPEISVWNSL 1600
+EAS++LE+M IKSYWP A +YN+LI+GL S GRQYEAV+WLE+M+SQ K+PE+ VW SL
Sbjct: 420 VEASKVLEEMLIKSYWPPADTYNILIRGLSSMGRQYEAVIWLEEMVSQDKLPELYVWRSL 479
Query: 1601 ASSF-CNTGMMNVSCETSNRLRS 1666
+S CN ++VSCET N+L S
Sbjct: 480 VTSVCCNMVAVDVSCETFNQLIS 502
>ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545552|gb|EEF47056.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 504
Score = 685 bits (1767), Expect = 0.0
Identities = 330/501 (65%), Positives = 414/501 (82%), Gaps = 1/501 (0%)
Frame = +2
Query: 161 MSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSGR 340
M+VRWPR+LTPT+LSQIIR QKNPL AL IF EAK +YP Y HNGP YATMI ILG+SGR
Sbjct: 1 MTVRWPRLLTPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGR 60
Query: 341 ITEMRGVIEQMREDSCECKDSVFVSAIKTYVKAGLVDEAISLYKNIPQFNCVNWTESFNT 520
ITEM+ V++QMREDSCECKDS+F +AIKTY + GL++EAISL+KNIPQFNCVNWTESFNT
Sbjct: 61 ITEMKEVLDQMREDSCECKDSIFANAIKTYARVGLLNEAISLFKNIPQFNCVNWTESFNT 120
Query: 521 LLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDYQ 700
LLQIMV E++LEAAHRLF+ESS GW+VKSR+++LNLLM LCQ +RSD+ALQ+FQEM+YQ
Sbjct: 121 LLQIMVKESKLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQ 180
Query: 701 GCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNGK 880
GCYP+RDSY I+M GLC+D RL+EATHLLYSMFWRISQKG+GEDIV+YR LDALCD G
Sbjct: 181 GCYPDRDSYRIVMMGLCKDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGM 240
Query: 881 FEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSYN 1060
E+A+E+LGKILRKGLKAPKRC+ +LDL +C+ +IE K LI++AL+RG++PSL SY
Sbjct: 241 VEQALEVLGKILRKGLKAPKRCHPRLDLSNCNSDGNIETTKHLINEALIRGAIPSLSSYT 300
Query: 1061 AMAVDLYSEGKIGEADEVIVEMRGKGFKPTHSIFEAKVAALCKVGKVDEAIKVIEEDMVE 1240
AMAVD Y+EGK+ +AD+V+ E + +GF+P+ +EAKVAALCK GKV EAI V+E +MVE
Sbjct: 301 AMAVDFYAEGKLSQADKVLDETQDRGFRPSLLTYEAKVAALCKEGKVHEAINVLEVEMVE 360
Query: 1241 VNCLPTGRVYNILLKNLCNNVGNSTAVLESLNKMSRKLGCKGDGETYSILLEMLCHERKY 1420
NC+P R+YNILLK LC+ ++TAV + L +M+++ GC + ETY IL+ LC + +
Sbjct: 361 GNCVPNVRLYNILLKGLCDARNSATAV-KYLKRMAKQTGCVANKETYCILVHGLCQDGGF 419
Query: 1421 LEASQLLEQMSIKSYWPCASSYNLLIKGLCSHGRQYEAVMWLEDMISQGKVPEISVWNSL 1600
+EAS++LE+M IKSYWP ++N+LI+GLCS GRQYEA MWLE+MIS + PE+SVWNSL
Sbjct: 420 IEASRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYEATMWLEEMISLDEAPELSVWNSL 479
Query: 1601 ASSFC-NTGMMNVSCETSNRL 1660
+ C NT ++ CET RL
Sbjct: 480 VTCLCSNTADIDACCETFKRL 500
Score = 78.6 bits (192), Expect = 5e-12
Identities = 78/342 (22%), Positives = 138/342 (40%), Gaps = 43/342 (12%)
Frame = +2
Query: 449 DEAISLYKNIPQFNCVNWTESFNTLLQIMVNENRL-EAAHRLFVESSCGWQVKSRIQALN 625
D A+ +++ + C +S+ ++ + + RL EA H L+ S W++ + +
Sbjct: 168 DVALQVFQEMNYQGCYPDRDSYRIVMMGLCKDGRLNEATHLLY---SMFWRISQKGSGED 224
Query: 626 LLMY-----ALCQKSRSDLALQIFQEMDYQG------CYPNRD----------------- 721
+++Y ALC + AL++ ++ +G C+P D
Sbjct: 225 IVIYRIFLDALCDIGMVEQALEVLGKILRKGLKAPKRCHPRLDLSNCNSDGNIETTKHLI 284
Query: 722 -------------SYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA 862
SY + + +L +A +L +G ++ Y + A
Sbjct: 285 NEALIRGAIPSLSSYTAMAVDFYAEGKLSQADKVLDET----QDRGFRPSLLTYEAKVAA 340
Query: 863 LCDNGKFEEAMEILGKILRKGLKAPK-RCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSV 1039
LC GK EA+ +L + +G P R YN L G C K L A G V
Sbjct: 341 LCKEGKVHEAINVLEVEMVEGNCVPNVRLYNILLKGLCDARNSATAVKYLKRMAKQTGCV 400
Query: 1040 PSLVSYNAMAVDLYSEGKIGEADEVIVEMRGKGFKPTHSIFEAKVAALCKVGKVDEAIKV 1219
+ +Y + L +G EA ++ EM K + P F + LC +G+ EA
Sbjct: 401 ANKETYCILVHGLCQDGGFIEASRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYEATMW 460
Query: 1220 IEEDMVEVNCLPTGRVYNILLKNLCNNVGNSTAVLESLNKMS 1345
+EE M+ ++ P V+N L+ LC+N + A E+ ++S
Sbjct: 461 LEE-MISLDEAPELSVWNSLVTCLCSNTADIDACCETFKRLS 501