BLASTX nr result

ID: Glycyrrhiza24_contig00018360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018360
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ...   211   6e-53
ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...   208   5e-52
ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ...   207   8e-52
ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   206   2e-51
ref|XP_003549190.1| PREDICTED: probable cyclic nucleotide-gated ...   200   1e-49

>ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 770

 Score =  211 bits (537), Expect = 6e-53
 Identities = 111/180 (61%), Positives = 126/180 (70%)
 Frame = +3

Query: 3    ISTLAGNQTPSNFVWEVVFTMXXXXXXXXXXXXXXXNVQNFLEXXXXXXXXXXXXXXXVK 182
            ISTLAGNQTPS F WEV+FTM               N+QNFL+               V+
Sbjct: 478  ISTLAGNQTPSYFEWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVE 537

Query: 183  KWMSHXXXXXXXXXXXXXAERYNWAATRGVSEEMVLGKLPEDLQTDIRRHLFKFVKKVRI 362
            +WMSH             AERY+WAATRGV+EE++L  LPEDLQTDIRRHLFKFVKKVRI
Sbjct: 538  QWMSHRRLPEDLRRRVRQAERYSWAATRGVNEEILLENLPEDLQTDIRRHLFKFVKKVRI 597

Query: 363  FALMDEPILDAIRERLKQKTYIKGSRILDQGYVVEKMVFVKRGKLESTGKDGTVLSLSEG 542
            F+LMDEPILDAI ERLKQKTYIKGS++L QG +VEKMVFV RGKLES G DGT++ LSEG
Sbjct: 598  FSLMDEPILDAICERLKQKTYIKGSKVLSQGGLVEKMVFVVRGKLESFGDDGTIVPLSEG 657


>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 772

 Score =  208 bits (529), Expect = 5e-52
 Identities = 110/180 (61%), Positives = 125/180 (69%)
 Frame = +3

Query: 3    ISTLAGNQTPSNFVWEVVFTMXXXXXXXXXXXXXXXNVQNFLEXXXXXXXXXXXXXXXVK 182
            ISTLAGNQTPS FVWEV+FTM               N+QNFL+               V+
Sbjct: 480  ISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVE 539

Query: 183  KWMSHXXXXXXXXXXXXXAERYNWAATRGVSEEMVLGKLPEDLQTDIRRHLFKFVKKVRI 362
            +WMSH             AERY+WAATRGV+EE++L  + EDLQTDIRRHLFKFVKKVRI
Sbjct: 540  QWMSHRRLPEDLRRRVRHAERYSWAATRGVNEEILLENMQEDLQTDIRRHLFKFVKKVRI 599

Query: 363  FALMDEPILDAIRERLKQKTYIKGSRILDQGYVVEKMVFVKRGKLESTGKDGTVLSLSEG 542
            FALMDEPILDAI ERLKQKTYIKGS++L QG +VEKMVFV RG LES G DGT++ LSEG
Sbjct: 600  FALMDEPILDAICERLKQKTYIKGSKVLSQGSLVEKMVFVVRGTLESFGDDGTMVPLSEG 659


>ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  207 bits (527), Expect = 8e-52
 Identities = 109/180 (60%), Positives = 124/180 (68%)
 Frame = +3

Query: 3    ISTLAGNQTPSNFVWEVVFTMXXXXXXXXXXXXXXXNVQNFLEXXXXXXXXXXXXXXXVK 182
            ISTLAGN  PS FVWEV+FTM               N+QNFL+               V+
Sbjct: 479  ISTLAGNLEPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVE 538

Query: 183  KWMSHXXXXXXXXXXXXXAERYNWAATRGVSEEMVLGKLPEDLQTDIRRHLFKFVKKVRI 362
            +WMSH             AERYNWAATRGV+EEM++  LPEDLQ DIRRHLFKFVKK+R+
Sbjct: 539  QWMSHRRLPEDLRRRVRRAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRL 598

Query: 363  FALMDEPILDAIRERLKQKTYIKGSRILDQGYVVEKMVFVKRGKLESTGKDGTVLSLSEG 542
            FALMDEPILDAI ERL+QKTYIKGS+IL QG +VEKMVFV RGKLES G+DGT + LSEG
Sbjct: 599  FALMDEPILDAICERLRQKTYIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEG 658


>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  206 bits (524), Expect = 2e-51
 Identities = 108/180 (60%), Positives = 124/180 (68%)
 Frame = +3

Query: 3    ISTLAGNQTPSNFVWEVVFTMXXXXXXXXXXXXXXXNVQNFLEXXXXXXXXXXXXXXXVK 182
            ISTLAGN  PS FVWEV+FTM               N+QNFL+               V+
Sbjct: 479  ISTLAGNLEPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVE 538

Query: 183  KWMSHXXXXXXXXXXXXXAERYNWAATRGVSEEMVLGKLPEDLQTDIRRHLFKFVKKVRI 362
            +WMSH             AERYNWAATRGV+EEM++  LPEDLQ DIRRHLFKFVKK+R+
Sbjct: 539  QWMSHRRLPEDLRRRVRQAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRL 598

Query: 363  FALMDEPILDAIRERLKQKTYIKGSRILDQGYVVEKMVFVKRGKLESTGKDGTVLSLSEG 542
            FALMDEPILDAI +RL+QKTYIKGS+IL QG +VEKMVFV RGKLES G+DGT + LSEG
Sbjct: 599  FALMDEPILDAICDRLRQKTYIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEG 658


>ref|XP_003549190.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 747

 Score =  200 bits (509), Expect = 1e-49
 Identities = 105/180 (58%), Positives = 121/180 (67%)
 Frame = +3

Query: 3   ISTLAGNQTPSNFVWEVVFTMXXXXXXXXXXXXXXXNVQNFLEXXXXXXXXXXXXXXXVK 182
           ISTLAGNQTPS+FVWEV+FTM               N+QNFL+               V+
Sbjct: 460 ISTLAGNQTPSDFVWEVLFTMAIVGLGLFLFALLIGNIQNFLQGLGRRRLEMQLRSRDVE 519

Query: 183 KWMSHXXXXXXXXXXXXXAERYNWAATRGVSEEMVLGKLPEDLQTDIRRHLFKFVKKVRI 362
           +WMSH             AERY+W ATRGV+E +++   PEDLQ DIRRHLFKFVKKVRI
Sbjct: 520 QWMSHRRLPEYLRRKVREAERYSWTATRGVNEAVLMENFPEDLQVDIRRHLFKFVKKVRI 579

Query: 363 FALMDEPILDAIRERLKQKTYIKGSRILDQGYVVEKMVFVKRGKLESTGKDGTVLSLSEG 542
           FALMDEPILDAI  RL+Q TYIKGSRIL  G VV+KM+FV RGKLES G+DGT + LSEG
Sbjct: 580 FALMDEPILDAICTRLRQSTYIKGSRILSHGAVVDKMLFVVRGKLESIGEDGTRIPLSEG 639


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