BLASTX nr result

ID: Glycyrrhiza24_contig00018313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018313
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530172.1| PREDICTED: uncharacterized protein LOC100781...   231   1e-58
gb|AEP17822.1| B-box 52 protein [Expression vector pMON108080]        219   9e-55
ref|XP_002316440.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_002311907.1| predicted protein [Populus trichocarpa] gi|2...   102   9e-20
gb|ADL36668.1| COL domain class transcription factor [Malus x do...   102   2e-19

>ref|XP_003530172.1| PREDICTED: uncharacterized protein LOC100781783 [Glycine max]
           gi|347666428|gb|AEP17825.1| B-box 53 protein [Expression
           vector pMON98939]
          Length = 243

 Score =  231 bits (590), Expect = 1e-58
 Identities = 132/210 (62%), Positives = 148/210 (70%), Gaps = 5/210 (2%)
 Frame = -3

Query: 897 ARHLRHLLCSECHRFAGIHISGATPRRVPSTCRSCSPEIPSDDGDD---DSVPYSSSESC 727
           ARHLR LLCS+C+RFA IHISGA  R + STC SCS EIPS D D     S   SSSESC
Sbjct: 40  ARHLRRLLCSKCNRFAAIHISGAISRHLSSTCTSCSLEIPSADSDSLPSSSTCVSSSESC 99

Query: 726 AAAPKEIIKAXXXXXXXXXXXSVTDDEASPAATRRRRNGGSSVAAAEEVFDEWSRELGL- 550
           +    +  K            SVTDD ASPAA +RRRNGGS      EVF++WSRE+GL 
Sbjct: 100 STNQIKAEKKRRRRRRSFSSSSVTDD-ASPAAKKRRRNGGS----VAEVFEKWSREIGLG 154

Query: 549 LGVNDGKRVALQALRVCLGTWKCVPFRVAAATSFWLGMRFCGNNA-TTFRNLVRLEAISG 373
           LGVN G RVA  AL VCLG W+ +PFRVAAATSFWLG+RFCG+    T +NL RLEAISG
Sbjct: 155 LGVN-GNRVASNALSVCLGKWRSLPFRVAAATSFWLGLRFCGDRGLATCQNLARLEAISG 213

Query: 372 VPAKLILATHAKLARVFSHRRELREGWDES 283
           VPAKLIL  HA LARVF+HRREL+EGW ES
Sbjct: 214 VPAKLILGAHANLARVFTHRRELQEGWGES 243


>gb|AEP17822.1| B-box 52 protein [Expression vector pMON108080]
          Length = 241

 Score =  219 bits (557), Expect = 9e-55
 Identities = 128/214 (59%), Positives = 148/214 (69%), Gaps = 9/214 (4%)
 Frame = -3

Query: 897 ARHLRHLLCSECHRFAGIHIS-GATPRRVPSTCRSCSPEIPSDDGDDD----SVPYSSSE 733
           ARHLR LLCS+C+RFAG HIS GA  R + STC SCSPE PS D  D     S   SSSE
Sbjct: 40  ARHLRRLLCSKCNRFAGFHISSGAISRHLSSTCSSCSPENPSADYSDSLPSSSTCVSSSE 99

Query: 732 SCAAAPKEIIKAXXXXXXXXXXXSVTDDEASPAATRRRRNGGSSVAAAEEVFDEWSRELG 553
           SC+    ++ K             VTDD ASPAA +R+R+GGS     EEVF++WSRE+G
Sbjct: 100 SCSTKQIKVEKKRSWSGSS-----VTDD-ASPAAKKRQRSGGS-----EEVFEKWSREIG 148

Query: 552 L---LGVNDGKRVALQALRVCLGTWKCVPFRVAAATSFWLGMRFCGNNA-TTFRNLVRLE 385
           L   LGVN G RVA  AL VCLG W+ +PFRVAAATSFWLG+RFCG+    + +NL RLE
Sbjct: 149 LGLGLGVN-GNRVASNALSVCLGKWRWLPFRVAAATSFWLGLRFCGDRGLASCQNLARLE 207

Query: 384 AISGVPAKLILATHAKLARVFSHRRELREGWDES 283
           AISGVP KLILA H  LARVF+HRREL+EGW ES
Sbjct: 208 AISGVPVKLILAAHGDLARVFTHRRELQEGWGES 241


>ref|XP_002316440.1| predicted protein [Populus trichocarpa] gi|222865480|gb|EEF02611.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  105 bits (262), Expect = 1e-20
 Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 9/213 (4%)
 Frame = -3

Query: 897 ARHLRHLLCSECHRFAGIHISGATPRRVPSTCRSCSPEIPSDDGDDDSVPYSSSESCAAA 718
           ARH R ++CS C    G   SG TP     TC SCSP     + + DS+  SSS + ++A
Sbjct: 40  ARHARRVICSGCGSITGNPFSGHTPSLSRVTCCSCSP----GNKELDSISCSSSSTLSSA 95

Query: 717 ---PKEIIKAXXXXXXXXXXXSVTDDEASPAATRRRRNGGSSVAAAEEVFDEWSRELGLL 547
                E  +            S +  +  P  + R R   S    +E VF  W + LGL 
Sbjct: 96  CISSTETTRFENTRKGVKATSSSSSVKNIPGRSLRDRLKRSRNLRSEGVFVNWCKRLGLN 155

Query: 546 GVNDGKRVALQALRVCLGTWKCVPFRVAAATSFWLGMRFCGN-NATTFRNLVRLEAISGV 370
           G N   + A +A+ +C G    +PFRV+ A SFW G+R CG+ + TT+ NL RLE +SGV
Sbjct: 156 G-NLVVQRATRAMALCFGR-LALPFRVSLAASFWFGLRLCGDKSVTTWENLRRLEEVSGV 213

Query: 369 PAKLILATHAKLARVFSHRR-----ELREGWDE 286
           P KLI+    K+ +    +R     E+ EGW E
Sbjct: 214 PNKLIVTVEMKIEQALRSKRLQLQKEMEEGWAE 246


>ref|XP_002311907.1| predicted protein [Populus trichocarpa] gi|222851727|gb|EEE89274.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  102 bits (255), Expect = 9e-20
 Identities = 75/211 (35%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
 Frame = -3

Query: 897 ARHLRHLLCSECHRFAGIHISGATPRRVPSTCRSCSPEIPSDDGDDDSVPYSSSESCAAA 718
           +RHLR ++CS C+   G   SG  P     TC SCSPE    D    S   SS+ S A  
Sbjct: 40  SRHLRRVICSACNSLTGGSFSGTAPSLRRVTCLSCSPENKELDSISCSSSCSSTLSSACI 99

Query: 717 PKEIIKAXXXXXXXXXXXSVTDDEASPAATRRRRNGGSSVAAAEEVFDEWSRELGLLGVN 538
                              VT+  A  +  R +R   S    +E VF  W   LGL G N
Sbjct: 100 STTETTRFENTRKGVETSCVTNIPARFSGGRLKR---SRNLRSECVFVNWCERLGLNG-N 155

Query: 537 DGKRVALQALRVCLGTWKCVPFRVAAATSFWLGMRFCGN-NATTFRNLVRLEAISGVPAK 361
              + A +A+ +C G    +PFRV+ A SFW G+R CG+ + TT+++L RLE +SGVP K
Sbjct: 156 LVVQRATRAIALCFGR-LVLPFRVSLAASFWFGVRSCGDKSVTTWQDLRRLEEVSGVPRK 214

Query: 360 LILATHAKLARVFSHRR-----ELREGWDES 283
           +I A   K+      RR      + EGW +S
Sbjct: 215 MISAVEMKIEHALRSRRLELHKNMEEGWADS 245


>gb|ADL36668.1| COL domain class transcription factor [Malus x domestica]
          Length = 271

 Score =  102 bits (253), Expect = 2e-19
 Identities = 85/236 (36%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
 Frame = -3

Query: 897 ARHLRHLLCSECHRFAGIHISGATPRRVPSTCRSCSPEIPSDDGDDDSVPYSSSE-SCAA 721
           ARHLR  LCS C   AG        R + S C SCSPE  S D D D+   SSS+ S   
Sbjct: 42  ARHLRQPLCSNCKSVAGT-------RDLHSLCSSCSPEFFSGDCDGDAKSSSSSDCSACI 94

Query: 720 APKEIIKAXXXXXXXXXXXSVTDDEASPAATR------------------------RRRN 613
           +  E+              SVTD   S    +                        R R 
Sbjct: 95  SSTEMGTTKTGYENRKSESSVTDVSGSNVPYKFSGMKRNILPKFSGAGRNNSVRRARART 154

Query: 612 GGSSVAAAEEVFDEWSRELGLLG--VNDGKRVALQALRVCLGTWKCVPFRVAAATSFWLG 439
             S  A AE  F  W + LG+ G         A  A   CL     VP RV  A SFW G
Sbjct: 155 SRSVDARAEGSFVNWCKRLGVNGNLAESVVSTASNAFGFCLERLASVPPRVCLAASFWFG 214

Query: 438 MRFCGNNAT-TFRNLVRLEAISGVPAKLILATHAKLARVFSHRR----ELREGWDE 286
           +RFCG+ +  T +NL R+E +SGVP KLILA  AKL      RR    +L EGW E
Sbjct: 215 LRFCGDRSVFTCQNLRRVEELSGVPVKLILAVEAKLGSELRVRRARRDDLEEGWAE 270


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