BLASTX nr result

ID: Glycyrrhiza24_contig00018244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018244
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus ...   116   2e-24
ref|XP_002322074.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula] gi|...   112   2e-23
ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   111   5e-23
emb|CBI15506.3| unnamed protein product [Vitis vinifera]              111   5e-23

>ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
           gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha,
           putative [Ricinus communis]
          Length = 770

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/70 (80%), Positives = 58/70 (82%)
 Frame = -3

Query: 212 PNPVMLCAIKEGSLGLQVWDPRRYPKDRFHLMPIITPAYPXXXXXXXXXXSTLRIMMEEF 33
           PNPVMLCAI+EGSLGLQVWDPRR PKDR+HLMPIITPAYP          STLRIM EEF
Sbjct: 281 PNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPSMNSSYNVSASTLRIMSEEF 340

Query: 32  QRGNEICEAM 3
           QRGNEICEAM
Sbjct: 341 QRGNEICEAM 350


>ref|XP_002322074.1| predicted protein [Populus trichocarpa] gi|222869070|gb|EEF06201.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/70 (78%), Positives = 57/70 (81%)
 Frame = -3

Query: 212 PNPVMLCAIKEGSLGLQVWDPRRYPKDRFHLMPIITPAYPXXXXXXXXXXSTLRIMMEEF 33
           PNPVMLCAI+EGSLGL VWDPRR PKDR+HLMPIITPAYP          STLRIM EEF
Sbjct: 273 PNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPSMNSSYNVSSSTLRIMTEEF 332

Query: 32  QRGNEICEAM 3
           QRGNEICEAM
Sbjct: 333 QRGNEICEAM 342


>ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
           gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago
           truncatula]
          Length = 822

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/70 (75%), Positives = 57/70 (81%)
 Frame = -3

Query: 212 PNPVMLCAIKEGSLGLQVWDPRRYPKDRFHLMPIITPAYPXXXXXXXXXXSTLRIMMEEF 33
           PNPVMLC IKEGSLGLQVWDPRR PKD++HLMPIITPAYP          STLR+M EEF
Sbjct: 309 PNPVMLCTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEF 368

Query: 32  QRGNEICEAM 3
           QRG+EICEAM
Sbjct: 369 QRGDEICEAM 378


>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/70 (75%), Positives = 57/70 (81%)
 Frame = -3

Query: 212 PNPVMLCAIKEGSLGLQVWDPRRYPKDRFHLMPIITPAYPXXXXXXXXXXSTLRIMMEEF 33
           PNPVMLCAI+EG+LGLQVWDPR+YPKDRFHLMPIITPAYP          STLRIM EEF
Sbjct: 279 PNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEF 338

Query: 32  QRGNEICEAM 3
           +RGNEI E M
Sbjct: 339 KRGNEISEVM 348


>emb|CBI15506.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/70 (75%), Positives = 57/70 (81%)
 Frame = -3

Query: 212 PNPVMLCAIKEGSLGLQVWDPRRYPKDRFHLMPIITPAYPXXXXXXXXXXSTLRIMMEEF 33
           PNPVMLCAI+EG+LGLQVWDPR+YPKDRFHLMPIITPAYP          STLRIM EEF
Sbjct: 279 PNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEF 338

Query: 32  QRGNEICEAM 3
           +RGNEI E M
Sbjct: 339 KRGNEISEVM 348


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