BLASTX nr result
ID: Glycyrrhiza24_contig00018243
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00018243
(695 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containi... 399 e-109
emb|CBI15196.3| unnamed protein product [Vitis vinifera] 315 4e-84
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi... 315 4e-84
emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera] 315 4e-84
ref|XP_002310922.1| predicted protein [Populus trichocarpa] gi|2... 305 6e-81
>ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 399 bits (1024), Expect = e-109
Identities = 197/236 (83%), Positives = 211/236 (89%), Gaps = 5/236 (2%)
Frame = +3
Query: 3 GVVQARHVFDEMTQRSVVSWNSILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQ 182
GV +ARHVFD M QRSVVSWNS+LAGYVRC DFDGARRVFD MP RNVVSWTTM++GCA+
Sbjct: 91 GVERARHVFDGMPQRSVVSWNSMLAGYVRCADFDGARRVFDVMPCRNVVSWTTMVAGCAR 150
Query: 183 NGKSKQALLLFGQMRRACVELDHVALVAALSACAELGDLKLGRWIH-----RYVASNQQK 347
NGKS+QALLLFG+MRRACVELD VALVAALSACAELGDLKLGRWIH R+VA N Q+
Sbjct: 151 NGKSRQALLLFGEMRRACVELDQVALVAALSACAELGDLKLGRWIHWYVQQRFVARNWQQ 210
Query: 348 PSVRLNNALIHMYASCGIIDEAYRVFTMMPQKTTVSWTSIIMAFAKQGLGKEALDLFNTM 527
PSVRLNNALIHMYASCGI+ EAY+VF MP+K+TVSWTS+IMAFAKQGLGKEALDLF TM
Sbjct: 211 PSVRLNNALIHMYASCGILHEAYQVFVKMPRKSTVSWTSMIMAFAKQGLGKEALDLFKTM 270
Query: 528 LSDGVGVHGVRPDEITFIGALCACSHAGFVDEGCQIFASMNCTWGISPRIEHYGCM 695
LSDGV V GVRPDEITFIG LCACSHAGFVDEG QIFASM TWGISP IEHYGCM
Sbjct: 271 LSDGVKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTWGISPSIEHYGCM 326
Score = 71.6 bits (174), Expect = 1e-10
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Frame = +3
Query: 9 VQARHVFDEMTQRSVVSWNSILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQNG 188
VQ R V Q SV N+++ Y CG A +VF +MPR++ VSWT+MI A+ G
Sbjct: 199 VQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPRKSTVSWTSMIMAFAKQG 258
Query: 189 KSKQALLLFGQMRRACVELD-----HVALVAALSACAELGDLKLGRWIHRYVASNQQ--- 344
K+AL LF M V++D + + L AC+ G + G H+ AS +
Sbjct: 259 LGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEG---HQIFASMKHTWG 315
Query: 345 -KPSVRLNNALIHMYASCGIIDEAYRVFTMMP 437
PS+ ++ + + G++DEA + MP
Sbjct: 316 ISPSIEHYGCMVDLLSRAGLLDEARGLIETMP 347
Score = 58.9 bits (141), Expect = 9e-07
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Frame = +3
Query: 153 WTTMISGCAQNGKSKQALLLFGQMRRACVELDHVALVAALSACAELGDLKLGRWIHRYVA 332
W +I G A++ +A+ + M + E D + LSACA G +K G +H V
Sbjct: 9 WNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEGEQVHATVL 68
Query: 333 SNQQKPSVRLNNALIHMYASCGIIDEAYRVFTMMPQKTTVSWTSIIMAF----------- 479
+V ++ +LI YA G ++ A VF MPQ++ VSW S++ +
Sbjct: 69 VKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCADFDGARR 128
Query: 480 --------------------AKQGLGKEALDLFNTMLSDGVGVHGVRPDEITFIGALCAC 599
A+ G ++AL LF M V + D++ + AL AC
Sbjct: 129 VFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVEL-----DQVALVAALSAC 183
Query: 600 SHAG 611
+ G
Sbjct: 184 AELG 187
>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 315 bits (808), Expect = 4e-84
Identities = 158/235 (67%), Positives = 182/235 (77%), Gaps = 4/235 (1%)
Frame = +3
Query: 3 GVVQARHVFDEMTQRSVVSWNSILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQ 182
GV +AR VFDE+ R++VSWNS+LAGYVRCGD DGARR+FDEMP RNVVSWTTMI+GCAQ
Sbjct: 83 GVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQ 142
Query: 183 NGKSKQALLLFGQMRRACVELDHVALVAALSACAELGDLKLGRWIHRYV----ASNQQKP 350
G+ KQAL LF +MRRA V+LD VALVAALSACAELGDLKLG WIH Y+ + Q
Sbjct: 143 IGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPL 202
Query: 351 SVRLNNALIHMYASCGIIDEAYRVFTMMPQKTTVSWTSIIMAFAKQGLGKEALDLFNTML 530
V LNN+LIHMYASCG+ID+AY+VF M Q++T+SWTS+I FAKQG +EAL +F M
Sbjct: 203 LVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWM- 261
Query: 531 SDGVGVHGVRPDEITFIGALCACSHAGFVDEGCQIFASMNCTWGISPRIEHYGCM 695
+G RPD ITFIG LCACSHAGFVD+G F MN WGI PRIEHYGCM
Sbjct: 262 -QRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCM 315
Score = 73.6 bits (179), Expect = 4e-11
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Frame = +3
Query: 63 NSILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQNGKSKQALLLFGQMRRACVE 242
NS++ Y CG D A +VF M +R+ +SWT+MI+G A+ G +++AL +F M+R +
Sbjct: 208 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 267
Query: 243 L---DHVALVAALSACAELGDLKLGRWIHRYVASNQQ---KPSVRLNNALIHMYASCGII 404
D + + L AC+ G + GR H + N++ P + ++ + + G +
Sbjct: 268 EGRPDGITFIGVLCACSHAGFVDQGR--HFFECMNKKWGIVPRIEHYGCMVDLLSRAGFL 325
Query: 405 DEAYRVFTMMPQK 443
DEA+R+ MP K
Sbjct: 326 DEAHRLIESMPMK 338
>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 315 bits (808), Expect = 4e-84
Identities = 158/235 (67%), Positives = 182/235 (77%), Gaps = 4/235 (1%)
Frame = +3
Query: 3 GVVQARHVFDEMTQRSVVSWNSILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQ 182
GV +AR VFDE+ R++VSWNS+LAGYVRCGD DGARR+FDEMP RNVVSWTTMI+GCAQ
Sbjct: 169 GVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQ 228
Query: 183 NGKSKQALLLFGQMRRACVELDHVALVAALSACAELGDLKLGRWIHRYV----ASNQQKP 350
G+ KQAL LF +MRRA V+LD VALVAALSACAELGDLKLG WIH Y+ + Q
Sbjct: 229 IGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPL 288
Query: 351 SVRLNNALIHMYASCGIIDEAYRVFTMMPQKTTVSWTSIIMAFAKQGLGKEALDLFNTML 530
V LNN+LIHMYASCG+ID+AY+VF M Q++T+SWTS+I FAKQG +EAL +F M
Sbjct: 289 LVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWM- 347
Query: 531 SDGVGVHGVRPDEITFIGALCACSHAGFVDEGCQIFASMNCTWGISPRIEHYGCM 695
+G RPD ITFIG LCACSHAGFVD+G F MN WGI PRIEHYGCM
Sbjct: 348 -QRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCM 401
Score = 80.5 bits (197), Expect = 3e-13
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 34/223 (15%)
Frame = +3
Query: 69 ILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQNGKSKQALLLFGQMRRACVELD 248
+L+ Y+ G+ A +VF+ + + W MI G +Q+ + + L+ +M A E +
Sbjct: 56 LLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPN 115
Query: 249 HVALVAALSACAELGDLKLGRWIHRYVASNQQKPSVRLNNALIHMYA------------- 389
+ CA L+ G +H V +N +V + +L+++YA
Sbjct: 116 EFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARR 175
Query: 390 ---------------------SCGIIDEAYRVFTMMPQKTTVSWTSIIMAFAKQGLGKEA 506
CG +D A R+F MP++ VSWT++I A+ G K+A
Sbjct: 176 VFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQA 235
Query: 507 LDLFNTMLSDGVGVHGVRPDEITFIGALCACSHAGFVDEGCQI 635
L LF+ M GV+ D++ + AL AC+ G + G I
Sbjct: 236 LHLFHEMRR-----AGVKLDQVALVAALSACAELGDLKLGTWI 273
Score = 73.6 bits (179), Expect = 4e-11
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Frame = +3
Query: 63 NSILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQNGKSKQALLLFGQMRRACVE 242
NS++ Y CG D A +VF M +R+ +SWT+MI+G A+ G +++AL +F M+R +
Sbjct: 294 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 353
Query: 243 L---DHVALVAALSACAELGDLKLGRWIHRYVASNQQ---KPSVRLNNALIHMYASCGII 404
D + + L AC+ G + GR H + N++ P + ++ + + G +
Sbjct: 354 EGRPDGITFIGVLCACSHAGFVDQGR--HFFECMNKKWGIVPRIEHYGCMVDLLSRAGFL 411
Query: 405 DEAYRVFTMMPQK 443
DEA+R+ MP K
Sbjct: 412 DEAHRLIESMPMK 424
>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 315 bits (808), Expect = 4e-84
Identities = 158/235 (67%), Positives = 182/235 (77%), Gaps = 4/235 (1%)
Frame = +3
Query: 3 GVVQARHVFDEMTQRSVVSWNSILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQ 182
GV +AR VFDE+ R++VSWNS+LAGYVRCGD DGARR+FDEMP RNVVSWTTMI+GCAQ
Sbjct: 185 GVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQ 244
Query: 183 NGKSKQALLLFGQMRRACVELDHVALVAALSACAELGDLKLGRWIHRYV----ASNQQKP 350
G+ KQAL LF +MRRA V+LD VALVAALSACAELGDLKLG WIH Y+ + Q
Sbjct: 245 IGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPL 304
Query: 351 SVRLNNALIHMYASCGIIDEAYRVFTMMPQKTTVSWTSIIMAFAKQGLGKEALDLFNTML 530
V LNN+LIHMYASCG+ID+AY+VF M Q++T+SWTS+I FAKQG +EAL +F M
Sbjct: 305 LVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWM- 363
Query: 531 SDGVGVHGVRPDEITFIGALCACSHAGFVDEGCQIFASMNCTWGISPRIEHYGCM 695
+G RPD ITFIG LCACSHAGFVD+G F MN WGI PRIEHYGCM
Sbjct: 364 -QRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCM 417
Score = 80.9 bits (198), Expect = 2e-13
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 34/223 (15%)
Frame = +3
Query: 69 ILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQNGKSKQALLLFGQMRRACVELD 248
+L+ Y+ G+ A +VF+ + + W MI G +Q+ + + L+ +M A E +
Sbjct: 72 LLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPN 131
Query: 249 HVALVAALSACAELGDLKLGRWIHRYVASNQQKPSVRLNNALIHMYA------------- 389
+ CA L+ G +H V +N +V + +L+++YA
Sbjct: 132 EFTYSFLIGGCARSXLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARR 191
Query: 390 ---------------------SCGIIDEAYRVFTMMPQKTTVSWTSIIMAFAKQGLGKEA 506
CG +D A R+F MP++ VSWT++I A+ G K+A
Sbjct: 192 VFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQA 251
Query: 507 LDLFNTMLSDGVGVHGVRPDEITFIGALCACSHAGFVDEGCQI 635
L LF+ M GV+ D++ + AL AC+ G + G I
Sbjct: 252 LHLFHEMRR-----AGVKLDQVALVAALSACAELGDLKLGTWI 289
Score = 73.2 bits (178), Expect = 5e-11
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Frame = +3
Query: 63 NSILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQNGKSKQALLLFGQMRRACVE 242
NS++ Y CG D A +VF M +R+ +SWT+MI+G A+ G +++AL +F M+R +
Sbjct: 310 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 369
Query: 243 L---DHVALVAALSACAELGDLKLGRWIHRYVASNQQ---KPSVRLNNALIHMYASCGII 404
D + + L AC+ G + GR H + N++ P + ++ + + G +
Sbjct: 370 EGRPDGITFIGVLCACSHAGFVDQGR--HFFECMNKKWGIVPRIEHYGCMVDLLSRAGFL 427
Query: 405 DEAYRVFTMMPQK 443
DEA+R+ MP K
Sbjct: 428 DEAHRLXESMPMK 440
>ref|XP_002310922.1| predicted protein [Populus trichocarpa] gi|222850742|gb|EEE88289.1|
predicted protein [Populus trichocarpa]
Length = 554
Score = 305 bits (781), Expect = 6e-81
Identities = 151/234 (64%), Positives = 179/234 (76%), Gaps = 4/234 (1%)
Frame = +3
Query: 6 VVQARHVFDEMTQRSVVSWNSILAGYVRCGDFDGARRVFDEMPRRNVVSWTTMISGCAQN 185
+ AR VFD+M++R+VV WNS+LAGY+R G+ DGARR+F EMP RNVVSWTTMISG A+N
Sbjct: 183 LASARKVFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKN 242
Query: 186 GKSKQALLLFGQMRRACVELDHVALVAALSACAELGDLKLGRWIHRYV----ASNQQKPS 353
GK KQAL LF QMR+A VELD V L+AAL+ACAELGDLK+G WIH Y+ + Q+
Sbjct: 243 GKCKQALNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVL 302
Query: 354 VRLNNALIHMYASCGIIDEAYRVFTMMPQKTTVSWTSIIMAFAKQGLGKEALDLFNTMLS 533
V LNNALIHMYASCG+IDEAY VF MP+++ VSWTS+I AFAKQG + L++F +M
Sbjct: 303 VSLNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSM-- 360
Query: 534 DGVGVHGVRPDEITFIGALCACSHAGFVDEGCQIFASMNCTWGISPRIEHYGCM 695
+G RPD ITFIG LCACSHAG VDEG Q+F M WGI PRIEHYGCM
Sbjct: 361 QRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCM 414
Score = 71.2 bits (173), Expect = 2e-10
Identities = 53/224 (23%), Positives = 108/224 (48%), Gaps = 6/224 (2%)
Frame = +3
Query: 6 VVQARHVFDEMTQRSVVSWNSILAGYVRCGDFDGARRVFDEM----PRRNVVSWTTMISG 173
++ A +VF ++ S + WN ++ + R + + F++M R + +++ +++
Sbjct: 76 LLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAA 135
Query: 174 CAQNGKSKQALLLFGQMRRACVELDHVALVAAL--SACAELGDLKLGRWIHRYVASNQQK 347
C + ++ + ++ +V L++ L A +G R V + +
Sbjct: 136 CTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSE 195
Query: 348 PSVRLNNALIHMYASCGIIDEAYRVFTMMPQKTTVSWTSIIMAFAKQGLGKEALDLFNTM 527
+V N+++ Y G +D A R+F MP++ VSWT++I +AK G K+AL+LF+ M
Sbjct: 196 RNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQM 255
Query: 528 LSDGVGVHGVRPDEITFIGALCACSHAGFVDEGCQIFASMNCTW 659
GV + D++ + AL AC+ G + G I + + T+
Sbjct: 256 RKAGVEL-----DQVVLLAALTACAELGDLKMGMWIHSYIQDTF 294