BLASTX nr result
ID: Glycyrrhiza24_contig00018235
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00018235 (471 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin... 178 4e-43 gb|ACU18186.1| unknown [Glycine max] 178 4e-43 gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo] 146 2e-33 ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 144 6e-33 ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 143 2e-32 >ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max] Length = 393 Score = 178 bits (452), Expect = 4e-43 Identities = 87/146 (59%), Positives = 106/146 (72%) Frame = +2 Query: 23 MGVDWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXX 202 MGV+WGELPPE++E+IS+ L +Y DYLRFR VCRSWRSSVP+ Sbjct: 1 MGVEWGELPPELLESISKTLTIYVDYLRFRSVCRSWRSSVPKIPLHLPPQLPWLMLSRRA 60 Query: 203 XXXXXFNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLPLPPL 382 F+LS NKTHLL N +RICGSSHGWLV LD++P +RLLNP+TRA+ PLPPL Sbjct: 61 F----FDLSLNKTHLL-NPQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPLPPL 115 Query: 383 HTFPNVVDFDYSNIGREYLVRNPYGG 460 H FPNVV FD++N+GREYL++NPYGG Sbjct: 116 HAFPNVVAFDHANVGREYLIQNPYGG 141 >gb|ACU18186.1| unknown [Glycine max] Length = 226 Score = 178 bits (452), Expect = 4e-43 Identities = 87/146 (59%), Positives = 106/146 (72%) Frame = +2 Query: 23 MGVDWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXX 202 MGV+WGELPPE++E+IS+ L +Y DYLRFR VCRSWRSSVP+ Sbjct: 1 MGVEWGELPPELLESISKTLTIYVDYLRFRSVCRSWRSSVPKIPLHLPPQLPWLMLSRRA 60 Query: 203 XXXXXFNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLPLPPL 382 F+LS NKTHLL N +RICGSSHGWLV LD++P +RLLNP+TRA+ PLPPL Sbjct: 61 F----FDLSLNKTHLL-NPQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPLPPL 115 Query: 383 HTFPNVVDFDYSNIGREYLVRNPYGG 460 H FPNVV FD++N+GREYL++NPYGG Sbjct: 116 HAFPNVVAFDHANVGREYLIQNPYGG 141 >gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo] Length = 392 Score = 146 bits (369), Expect = 2e-33 Identities = 73/143 (51%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Frame = +2 Query: 32 DWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXXXXX 211 DW ELPP++++ IS L +Y DYLRFR VC+SWRSSVP+ Sbjct: 3 DWTELPPDLLQQISDYLTVYSDYLRFRVVCQSWRSSVPKIPHRLPPQLPCLIIPLYHDCR 62 Query: 212 XX-FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLPLPPLHT 388 FN S NK H L R CGSSHGWL LD++P + LLNP+TRA LPPL T Sbjct: 63 CGLFNFSDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRLPPLST 122 Query: 389 FPNVVDFDYSNIGREYLVRNPYG 457 FPNVV FDYS +GREYL+R P G Sbjct: 123 FPNVVSFDYSRVGREYLIRTPTG 145 >ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1| predicted protein [Populus trichocarpa] Length = 393 Score = 144 bits (364), Expect = 6e-33 Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 4/149 (2%) Frame = +2 Query: 23 MGVDWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXX 202 M VDW +LPPE++E IS+K+ +Y DYL F+ VC +W+SS+P+T Sbjct: 1 MAVDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQ 60 Query: 203 XXXXX----FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLP 370 FNLST K H L + CGSSHGWL+ LDDSP + ++NP+TR + Sbjct: 61 SNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIH 120 Query: 371 LPPLHTFPNVVDFDYSNIGREYLVRNPYG 457 LP + +FPNVV FDY+N+GREYL+ NP G Sbjct: 121 LPAISSFPNVVSFDYANVGREYLLVNPQG 149 >ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 398 Score = 143 bits (360), Expect = 2e-32 Identities = 70/150 (46%), Positives = 92/150 (61%), Gaps = 5/150 (3%) Frame = +2 Query: 23 MGVDWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXX 202 M +DW +LPPE++E IS+ L +Y DYL R VC +WR S+P+T Sbjct: 1 MIMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQ 60 Query: 203 XXXXX-----FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASL 367 F+LSTNK H L + + R CGSSHGWL+ LDD+P + L+NP+TRA L Sbjct: 61 SQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKL 120 Query: 368 PLPPLHTFPNVVDFDYSNIGREYLVRNPYG 457 LPPL +FPNV+ F+YS+IGREY +RN G Sbjct: 121 SLPPLSSFPNVISFNYSDIGREYALRNLLG 150