BLASTX nr result

ID: Glycyrrhiza24_contig00018235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018235
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...   178   4e-43
gb|ACU18186.1| unknown [Glycine max]                                  178   4e-43
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    146   2e-33
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   143   2e-32

>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/146 (59%), Positives = 106/146 (72%)
 Frame = +2

Query: 23  MGVDWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXX 202
           MGV+WGELPPE++E+IS+ L +Y DYLRFR VCRSWRSSVP+                  
Sbjct: 1   MGVEWGELPPELLESISKTLTIYVDYLRFRSVCRSWRSSVPKIPLHLPPQLPWLMLSRRA 60

Query: 203 XXXXXFNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLPLPPL 382
                F+LS NKTHLL N      +RICGSSHGWLV LD++P +RLLNP+TRA+ PLPPL
Sbjct: 61  F----FDLSLNKTHLL-NPQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPLPPL 115

Query: 383 HTFPNVVDFDYSNIGREYLVRNPYGG 460
           H FPNVV FD++N+GREYL++NPYGG
Sbjct: 116 HAFPNVVAFDHANVGREYLIQNPYGG 141


>gb|ACU18186.1| unknown [Glycine max]
          Length = 226

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/146 (59%), Positives = 106/146 (72%)
 Frame = +2

Query: 23  MGVDWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXX 202
           MGV+WGELPPE++E+IS+ L +Y DYLRFR VCRSWRSSVP+                  
Sbjct: 1   MGVEWGELPPELLESISKTLTIYVDYLRFRSVCRSWRSSVPKIPLHLPPQLPWLMLSRRA 60

Query: 203 XXXXXFNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLPLPPL 382
                F+LS NKTHLL N      +RICGSSHGWLV LD++P +RLLNP+TRA+ PLPPL
Sbjct: 61  F----FDLSLNKTHLL-NPQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPLPPL 115

Query: 383 HTFPNVVDFDYSNIGREYLVRNPYGG 460
           H FPNVV FD++N+GREYL++NPYGG
Sbjct: 116 HAFPNVVAFDHANVGREYLIQNPYGG 141


>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score =  146 bits (369), Expect = 2e-33
 Identities = 73/143 (51%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
 Frame = +2

Query: 32  DWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXXXXX 211
           DW ELPP++++ IS  L +Y DYLRFR VC+SWRSSVP+                     
Sbjct: 3   DWTELPPDLLQQISDYLTVYSDYLRFRVVCQSWRSSVPKIPHRLPPQLPCLIIPLYHDCR 62

Query: 212 XX-FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLPLPPLHT 388
              FN S NK H L         R CGSSHGWL  LD++P + LLNP+TRA   LPPL T
Sbjct: 63  CGLFNFSDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRLPPLST 122

Query: 389 FPNVVDFDYSNIGREYLVRNPYG 457
           FPNVV FDYS +GREYL+R P G
Sbjct: 123 FPNVVSFDYSRVGREYLIRTPTG 145


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 4/149 (2%)
 Frame = +2

Query: 23  MGVDWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXX 202
           M VDW +LPPE++E IS+K+ +Y DYL F+ VC +W+SS+P+T                 
Sbjct: 1   MAVDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQ 60

Query: 203 XXXXX----FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASLP 370
                    FNLST K H L         + CGSSHGWL+ LDDSP + ++NP+TR  + 
Sbjct: 61  SNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIH 120

Query: 371 LPPLHTFPNVVDFDYSNIGREYLVRNPYG 457
           LP + +FPNVV FDY+N+GREYL+ NP G
Sbjct: 121 LPAISSFPNVVSFDYANVGREYLLVNPQG 149


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/150 (46%), Positives = 92/150 (61%), Gaps = 5/150 (3%)
 Frame = +2

Query: 23  MGVDWGELPPEIVETISRKLILYGDYLRFRCVCRSWRSSVPETXXXXXXXXXXXXXXXXX 202
           M +DW +LPPE++E IS+ L +Y DYL  R VC +WR S+P+T                 
Sbjct: 1   MIMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQ 60

Query: 203 XXXXX-----FNLSTNKTHLLPNTNLPFLSRICGSSHGWLVTLDDSPCVRLLNPITRASL 367
                     F+LSTNK H L    + +  R CGSSHGWL+ LDD+P + L+NP+TRA L
Sbjct: 61  SQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKL 120

Query: 368 PLPPLHTFPNVVDFDYSNIGREYLVRNPYG 457
            LPPL +FPNV+ F+YS+IGREY +RN  G
Sbjct: 121 SLPPLSSFPNVISFNYSDIGREYALRNLLG 150


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