BLASTX nr result

ID: Glycyrrhiza24_contig00018221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018221
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48656.1| unknown [Lotus japonicus]                               82   5e-14
ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi...    77   1e-12
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]    74   2e-11
emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera]    71   8e-11
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]    71   8e-11

>gb|AFK48656.1| unknown [Lotus japonicus]
          Length = 219

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/85 (42%), Positives = 54/85 (63%)
 Frame = -1

Query: 280 HALSIKLNEKNYLLWNQQVEAVIIAHKLHRYVVNPIIPMKYATEFDREIDLPTDDFQRWL 101
           H L +KL++ N+L W Q VE ++  H+L  ++ +P IP ++ +E DR   +    +Q W 
Sbjct: 35  HKLILKLDDSNFLSWKQHVEGIVRTHRLQSFLAHPEIPPRWLSEDDRVNAVENPAYQIWE 94

Query: 100 VQDQMLFTWILSSLSDSILPRVIGC 26
            QD  LFTW+LSSLS S+LP V+ C
Sbjct: 95  QQDSALFTWLLSSLSPSVLPTVVNC 119


>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula]
           gi|355493153|gb|AES74356.1| Histone deacetylase
           [Medicago truncatula]
          Length = 1775

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/89 (40%), Positives = 54/89 (60%)
 Frame = -1

Query: 286 FTHALSIKLNEKNYLLWNQQVEAVIIAHKLHRYVVNPIIPMKYATEFDREIDLPTDDFQR 107
           F   +SIKL++ NYL W QQVE V+   K+ ++V++P IP  Y T+  RE       +  
Sbjct: 470 FKQVVSIKLDDTNYLQWKQQVEGVLRGTKMVKFVISPEIPPVYLTDAAREAGTENSAYTE 529

Query: 106 WLVQDQMLFTWILSSLSDSILPRVIGCKH 20
           W  QD +L TW+LS++S S+L R +  +H
Sbjct: 530 WEEQDSLLCTWVLSTISPSLLSRFVLLRH 558


>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
          Length = 1138

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = -1

Query: 286 FTHALSIKLNEKNYLLWNQQVEAVIIAHKLHRYVVNPI-IPMKYATEFDREIDLPTDDFQ 110
           F H LS+KL+ KN+L+W QQ+ + I  + L ++V++   + +++ T  D      T +F 
Sbjct: 25  FNHLLSVKLDNKNFLIWKQQIVSAIRGYGLQKFVLSDDKVLVQFLTREDARSGKATKEFL 84

Query: 109 RWLVQDQMLFTWILSSLSDSILPRVIGC 26
            W   DQ+L +W+LS + +SILPR++GC
Sbjct: 85  EWEQHDQLLLSWLLSFVFESILPRLVGC 112


>emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera]
          Length = 410

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -1

Query: 286 FTHALSIKLNEKNYLLWNQQVEAVIIAHKLHRYVVNPI-IPMKYATEFDREIDLPTDDFQ 110
           F+H +SI+L+  N+LLW +QV   I  HKL  +V      P+ + T  D E+D     F 
Sbjct: 16  FSHXVSIRLDNNNFLLWRKQVLTAIRGHKLQNFVFGTKPXPLXFLTLRDEEMDNVNPXFL 75

Query: 109 RWLVQDQMLFTWILSSLSDSILPRVIGCKH 20
            W  QDQ+L +W+LS +S+ IL  ++ C++
Sbjct: 76  DWEQQDQLLLSWLLSXMSEGILTHMVNCEN 105


>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
          Length = 1079

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -1

Query: 286 FTHALSIKLNEKNYLLWNQQVEAVIIAHKLHRYVVNPIIP-MKYATEFDREIDLPTDDFQ 110
           F H+ S+KL   N+L+W +Q+ + I  H L  +V+    P +K+ +  DR   +   DF 
Sbjct: 21  FNHSTSVKLENHNFLIWRKQIFSAIRGHNLQHFVIGVHDPSLKFRSSEDRSQGIVNQDFL 80

Query: 109 RWLVQDQMLFTWILSSLSDSILPRVIGCK 23
            W  QDQ+L +W+LSS+ + +L R I C+
Sbjct: 81  DWEQQDQLLVSWLLSSMFEGVLSRCINCE 109


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