BLASTX nr result

ID: Glycyrrhiza24_contig00018211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018211
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]   312   2e-83
ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] g...   307   7e-82
ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]   301   5e-80
ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]   299   1e-79
ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]   298   3e-79

>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score =  312 bits (800), Expect = 2e-83
 Identities = 155/164 (94%), Positives = 159/164 (96%)
 Frame = -2

Query: 492  NSLSTSPVGSGSPIRHNDLNMRYASGLRNVAGVVGPWHLDIGNMDENLASSLLEEFKSNK 313
            NSLSTSPVGSGSPIRHNDLNMR+ASG+RN+AGV+GPWHLD GNMDEN ASSLLEEFKSNK
Sbjct: 652  NSLSTSPVGSGSPIRHNDLNMRFASGMRNLAGVMGPWHLDAGNMDENFASSLLEEFKSNK 711

Query: 312  TKCFELSEISGHVVEFSADQYGSRFIQQKLETATIEEKNMVYQEIMPHALALMTDVFGNY 133
            TKCFELSEISGHVVEFSADQYGSRFIQQKLETAT EEKNMVYQEIMP ALALMTDVFGNY
Sbjct: 712  TKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPQALALMTDVFGNY 771

Query: 132  VVQKFFEHGLASQRRELANKLFGHVLTLSLQMYGCRVIQKAIEV 1
            VVQKFFEHGLASQRRELANKLF HVLTLSLQMYGCRVIQKAIEV
Sbjct: 772  VVQKFFEHGLASQRRELANKLFEHVLTLSLQMYGCRVIQKAIEV 815



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/92 (34%), Positives = 50/92 (54%)
 Frame = -2

Query: 279  HVVEFSADQYGSRFIQQKLETATIEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLA 100
            HV+  S   YG R IQ+ +E   +++K  + QE+  + +  + D  GN+V+QK  E    
Sbjct: 795  HVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPE 854

Query: 99   SQRRELANKLFGHVLTLSLQMYGCRVIQKAIE 4
                 + +  F  V+TLS   YGCRVIQ+ +E
Sbjct: 855  DAINFIVSTFFDQVVTLSTHPYGCRVIQRVLE 886



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
 Frame = -2

Query: 303  FELSEISGHVVEFSADQYGSRFIQQKLETATIEE-KNMVYQEIMPHALALMTDVFGNYVV 127
            F +S     VV  S   YG R IQ+ LE       +  V  EI+     L  D +GNYVV
Sbjct: 859  FIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVV 918

Query: 126  QKFFEHGLASQRRELANKLFGHVLTLSLQMYGCRVIQKAI 7
            Q   EHG   +R  +  +L G ++ +S Q +   V++K +
Sbjct: 919  QHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCL 958


>ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] gi|87241276|gb|ABD33134.1|
            Nucleic acid binding NABP [Medicago truncatula]
            gi|355486444|gb|AES67647.1| Pumilio-like protein
            [Medicago truncatula]
          Length = 1047

 Score =  307 bits (786), Expect = 7e-82
 Identities = 152/164 (92%), Positives = 157/164 (95%)
 Frame = -2

Query: 492  NSLSTSPVGSGSPIRHNDLNMRYASGLRNVAGVVGPWHLDIGNMDENLASSLLEEFKSNK 313
            NSLSTSPVGSGSPIRHNDLNM +ASG+RNVAGV+ PWHLD  N+DEN ASSLLEEFKSNK
Sbjct: 645  NSLSTSPVGSGSPIRHNDLNMHFASGMRNVAGVMAPWHLDAVNVDENFASSLLEEFKSNK 704

Query: 312  TKCFELSEISGHVVEFSADQYGSRFIQQKLETATIEEKNMVYQEIMPHALALMTDVFGNY 133
            TKCFELSEISGHVVEFSADQYGSRFIQQKLETAT EEKNMVYQEI PHALALMTDVFGNY
Sbjct: 705  TKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNY 764

Query: 132  VVQKFFEHGLASQRRELANKLFGHVLTLSLQMYGCRVIQKAIEV 1
            VVQKFFEHGLASQRRELANKL+GHVLTLSLQMYGCRVIQKAIEV
Sbjct: 765  VVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEV 808



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
 Frame = -2

Query: 303  FELSEISGHVVEFSADQYGSRFIQQKLETA-TIEEKNMVYQEIMPHALALMTDVFGNYVV 127
            F +S     VV  S   YG R IQ+ LE     + +  V  EI+     L  D +GNYVV
Sbjct: 852  FIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVV 911

Query: 126  QKFFEHGLASQRRELANKLFGHVLTLSLQMYGCRVIQKAI 7
            Q   EHG   +R  +  +L G+++ +S Q +   V++K +
Sbjct: 912  QHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVEKCL 951


>ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  301 bits (770), Expect = 5e-80
 Identities = 147/162 (90%), Positives = 156/162 (96%)
 Frame = -2

Query: 486  LSTSPVGSGSPIRHNDLNMRYASGLRNVAGVVGPWHLDIGNMDENLASSLLEEFKSNKTK 307
            +STSPVGSGSP+RHN+LNMR+ASGLRN+AGV+GPWH+D GN+DE+ ASSLLEEFKSNKTK
Sbjct: 646  VSTSPVGSGSPVRHNELNMRFASGLRNLAGVMGPWHVDTGNIDESFASSLLEEFKSNKTK 705

Query: 306  CFELSEISGHVVEFSADQYGSRFIQQKLETATIEEKNMVYQEIMPHALALMTDVFGNYVV 127
            CFELSEI GHVVEFSADQYGSRFIQQKLETAT EEK MVYQEIMPHALALMTDVFGNYVV
Sbjct: 706  CFELSEIVGHVVEFSADQYGSRFIQQKLETATTEEKKMVYQEIMPHALALMTDVFGNYVV 765

Query: 126  QKFFEHGLASQRRELANKLFGHVLTLSLQMYGCRVIQKAIEV 1
            QKFFEHGLASQRRELANKL GHVLTLSLQMYGCRVIQKAIEV
Sbjct: 766  QKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEV 807



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
 Frame = -2

Query: 303  FELSEISGHVVEFSADQYGSRFIQQKLETA---TIEEKNMVYQEIMPHALALMTDVFGNY 133
            F +S     VV  S   YG R IQ+ LE     T ++K  V  EI+     L  D +GNY
Sbjct: 851  FIVSTFFDQVVTLSTHPYGCRVIQRVLEHCEDPTTQQK--VMDEILGAVSMLAQDQYGNY 908

Query: 132  VVQKFFEHGLASQRRELANKLFGHVLTLSLQMYGCRVIQKAI 7
            VVQ   EHG + +R  +  +L G ++ +S Q +   V++K +
Sbjct: 909  VVQHVLEHGKSHERSSIIKELAGKIVQMSQQKFASNVVEKCL 950


>ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1049

 Score =  299 bits (766), Expect = 1e-79
 Identities = 145/162 (89%), Positives = 157/162 (96%)
 Frame = -2

Query: 486  LSTSPVGSGSPIRHNDLNMRYASGLRNVAGVVGPWHLDIGNMDENLASSLLEEFKSNKTK 307
            +STSPVGSGSPIRHN+LNM++ASG+RN+AG +GPWH+D GN+DE+ ASSLLEEFKSNKTK
Sbjct: 648  VSTSPVGSGSPIRHNELNMQFASGMRNLAGAMGPWHVDTGNIDESFASSLLEEFKSNKTK 707

Query: 306  CFELSEISGHVVEFSADQYGSRFIQQKLETATIEEKNMVYQEIMPHALALMTDVFGNYVV 127
            CFELSEI+GHVVEFSADQYGSRFIQQKLETAT EEKN+VYQEIMPHALALMTDVFGNYVV
Sbjct: 708  CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNLVYQEIMPHALALMTDVFGNYVV 767

Query: 126  QKFFEHGLASQRRELANKLFGHVLTLSLQMYGCRVIQKAIEV 1
            QKFFEHGLASQRRELANKL GHVLTLSLQMYGCRVIQKAIEV
Sbjct: 768  QKFFEHGLASQRRELANKLHGHVLTLSLQMYGCRVIQKAIEV 809


>ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  298 bits (763), Expect = 3e-79
 Identities = 144/162 (88%), Positives = 156/162 (96%)
 Frame = -2

Query: 486  LSTSPVGSGSPIRHNDLNMRYASGLRNVAGVVGPWHLDIGNMDENLASSLLEEFKSNKTK 307
            +STSPVGS SP+RHN+LNMR+ASG+RN+AGV+GPWH D GN+DE+ ASSLLEEFK+NKTK
Sbjct: 646  VSTSPVGSASPVRHNELNMRFASGMRNLAGVMGPWHADTGNIDESFASSLLEEFKTNKTK 705

Query: 306  CFELSEISGHVVEFSADQYGSRFIQQKLETATIEEKNMVYQEIMPHALALMTDVFGNYVV 127
            CFELSEI+GHVVEFSADQYGSRFIQQKLETAT EEKNMVYQEIMPH+LALMTDVFGNYVV
Sbjct: 706  CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHSLALMTDVFGNYVV 765

Query: 126  QKFFEHGLASQRRELANKLFGHVLTLSLQMYGCRVIQKAIEV 1
            QKFFEHGLASQRRELANKL GHVLTLSLQMYGCRVIQKAIEV
Sbjct: 766  QKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEV 807



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
 Frame = -2

Query: 303  FELSEISGHVVEFSADQYGSRFIQQKLETA---TIEEKNMVYQEIMPHALALMTDVFGNY 133
            F +S     VV  S   YG R IQ+ LE     T ++K  V  EI+     L  D +GNY
Sbjct: 851  FIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQK--VMDEILGAVSMLAQDQYGNY 908

Query: 132  VVQKFFEHGLASQRRELANKLFGHVLTLSLQMYGCRVIQKAI 7
            VVQ   EHG   +R  +  +L G ++ +S Q +   V++K +
Sbjct: 909  VVQHVLEHGKPHERSCIIKELAGKIVQMSQQKFASNVVEKCL 950


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