BLASTX nr result

ID: Glycyrrhiza24_contig00018175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018175
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598145.1| Cellulose synthase [Medicago truncatula] gi|...   164   5e-39
ref|XP_003526369.1| PREDICTED: LOW QUALITY PROTEIN: probable cel...   140   1e-31
gb|ACJ38667.1| cellulose synthase [Betula luminifera]                 131   5e-29
emb|CBI40805.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002277713.1| PREDICTED: probable cellulose synthase A cat...   127   7e-28

>ref|XP_003598145.1| Cellulose synthase [Medicago truncatula]
           gi|355487193|gb|AES68396.1| Cellulose synthase [Medicago
           truncatula]
          Length = 1050

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/110 (69%), Positives = 86/110 (78%), Gaps = 5/110 (4%)
 Frame = +2

Query: 2   GDFARRELQELNGKTCQICGEETGVNAEGDPFVACNECAFPVCRNCYEYERREGNKVCPQ 181
           GD+AR +LQEL+G TCQ+CGE+ GVNA+GDPFVACNECAFPVCRNCYEYERREGN+VCPQ
Sbjct: 24  GDYARTDLQELDGDTCQLCGEDIGVNADGDPFVACNECAFPVCRNCYEYERREGNQVCPQ 83

Query: 182 CKTRFKRLKGCARVXXXXXXXXXXXXXXXFD-----FDVQIPMSPEGEEI 316
           CKT+FKRLKGCARV               FD      D+QIPMSPEGEE+
Sbjct: 84  CKTKFKRLKGCARVEGDEEEDDIDDLENEFDEGRNEQDMQIPMSPEGEEL 133


>ref|XP_003526369.1| PREDICTED: LOW QUALITY PROTEIN: probable cellulose synthase A
           catalytic subunit 3 [UDP-forming]-like [Glycine max]
          Length = 982

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/94 (68%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   GDFARRELQEL-NGKTCQICGEETGVNAEGDPFVACNECAFPVCRNCYEYERREGNKVCP 178
           GDFA+RELQ L +GK CQ+CG++ GVN +GD FVACNECAFPVC++CYEYERREGN+VCP
Sbjct: 24  GDFAQRELQPLLHGKICQLCGDDIGVNEDGDLFVACNECAFPVCKSCYEYERREGNQVCP 83

Query: 179 QCKTRFKRLKGCARVXXXXXXXXXXXXXXXFDFD 280
           QCKTRFKRLKGCARV               FDFD
Sbjct: 84  QCKTRFKRLKGCARVEGDEEEDIDDDLENEFDFD 117


>gb|ACJ38667.1| cellulose synthase [Betula luminifera]
          Length = 1093

 Score =  131 bits (330), Expect = 5e-29
 Identities = 57/95 (60%), Positives = 70/95 (73%)
 Frame = +2

Query: 2   GDFARRELQELNGKTCQICGEETGVNAEGDPFVACNECAFPVCRNCYEYERREGNKVCPQ 181
           G+ A R LQ+L+G+ CQICG++ G+  +G+ FVACNECAFP+CR CYEYERREGN+VCPQ
Sbjct: 24  GESAPRPLQQLSGQICQICGDDVGLTVDGELFVACNECAFPICRTCYEYERREGNQVCPQ 83

Query: 182 CKTRFKRLKGCARVXXXXXXXXXXXXXXXFDFDVQ 286
           CKTRFKRLKGCARV               F+FD +
Sbjct: 84  CKTRFKRLKGCARVQGDEEEDGIDDLENEFNFDAR 118


>emb|CBI40805.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  127 bits (320), Expect = 7e-28
 Identities = 53/74 (71%), Positives = 65/74 (87%)
 Frame = +2

Query: 2   GDFARRELQELNGKTCQICGEETGVNAEGDPFVACNECAFPVCRNCYEYERREGNKVCPQ 181
           G+   + LQ+L+G+ CQICG++ G+N +G+ FVACNECAFPVCR CYEYERREG++VCPQ
Sbjct: 24  GESGPKPLQQLSGQICQICGDDVGLNVDGELFVACNECAFPVCRTCYEYERREGSQVCPQ 83

Query: 182 CKTRFKRLKGCARV 223
           CKTRFKRLKGCARV
Sbjct: 84  CKTRFKRLKGCARV 97


>ref|XP_002277713.1| PREDICTED: probable cellulose synthase A catalytic subunit 5
           [UDP-forming] [Vitis vinifera]
          Length = 1091

 Score =  127 bits (320), Expect = 7e-28
 Identities = 53/74 (71%), Positives = 65/74 (87%)
 Frame = +2

Query: 2   GDFARRELQELNGKTCQICGEETGVNAEGDPFVACNECAFPVCRNCYEYERREGNKVCPQ 181
           G+   + LQ+L+G+ CQICG++ G+N +G+ FVACNECAFPVCR CYEYERREG++VCPQ
Sbjct: 24  GESGPKPLQQLSGQICQICGDDVGLNVDGELFVACNECAFPVCRTCYEYERREGSQVCPQ 83

Query: 182 CKTRFKRLKGCARV 223
           CKTRFKRLKGCARV
Sbjct: 84  CKTRFKRLKGCARV 97


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