BLASTX nr result

ID: Glycyrrhiza24_contig00018170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018170
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42443.1| unknown [Medicago truncatula]                          377   e-102
ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...   361   2e-97
ref|XP_003531624.1| PREDICTED: DNA replication complex GINS prot...   359   6e-97
gb|ACU21110.1| unknown [Glycine max]                                  357   2e-96
ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   281   2e-73

>gb|AFK42443.1| unknown [Medicago truncatula]
          Length = 227

 Score =  377 bits (967), Expect = e-102
 Identities = 190/227 (83%), Positives = 205/227 (90%)
 Frame = +3

Query: 216 MASSSVEGGPTQPIDDYDDLISTTDVELLKRAWRNEKAAPEILRFEFDLISRVREQIQLM 395
           M S S EG  +   DDYD LISTTDVELLKRAWRNEKAAPEILRFE DLI+RV+ QI+LM
Sbjct: 1   MGSRSAEGEQSSLADDYDALISTTDVELLKRAWRNEKAAPEILRFESDLINRVKGQIELM 60

Query: 396 EETVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHIQKTGELWNRLS 575
           EETVEEK S G+DPLSVSLYQMDLDRTLFLLRSYLRIRI KIEKYMFHI+KT ELWNRLS
Sbjct: 61  EETVEEKLSVGSDPLSVSLYQMDLDRTLFLLRSYLRIRILKIEKYMFHIRKTQELWNRLS 120

Query: 576 KDEKDFTRRCTGDLKQHLEECVLSKLPENYQSFQKQSVISEEDDMVPEPQLDTYVLCRSK 755
           +DEK FT RCT DLK+HLE  VLSKLPENYQS+++QSVISEEDDMVPEP+LDT+VLCRSK
Sbjct: 121 RDEKLFTERCTDDLKEHLESSVLSKLPENYQSYERQSVISEEDDMVPEPRLDTFVLCRSK 180

Query: 756 EYITGIQLEDGPVDDRSKLFEMEPGMLYFICYKSIKALVESGKIDLL 896
           EY+TGIQLEDGPVDDRSKLFEMEP +LYFICYKSIK LVESGKIDLL
Sbjct: 181 EYLTGIQLEDGPVDDRSKLFEMEPDVLYFICYKSIKPLVESGKIDLL 227


>ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication complex GINS
           protein SLD5-like [Glycine max]
          Length = 226

 Score =  361 bits (926), Expect = 2e-97
 Identities = 181/227 (79%), Positives = 204/227 (89%)
 Frame = +3

Query: 216 MASSSVEGGPTQPIDDYDDLISTTDVELLKRAWRNEKAAPEILRFEFDLISRVREQIQLM 395
           MAS+S   G +   DDY+ LI+TTD ELLKRAWRNEKAAPEILR+E DL+SRV++ IQ +
Sbjct: 1   MASNSAAEGVSMG-DDYEALIATTDAELLKRAWRNEKAAPEILRYESDLVSRVKKVIQFL 59

Query: 396 EETVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHIQKTGELWNRLS 575
           EETVEEKSSGGT+PLSVSLYQMDLDRTLFLLRSYLRIRIQKIEK++FHIQKT ELWNRLS
Sbjct: 60  EETVEEKSSGGTNPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKFVFHIQKTEELWNRLS 119

Query: 576 KDEKDFTRRCTGDLKQHLEECVLSKLPENYQSFQKQSVISEEDDMVPEPQLDTYVLCRSK 755
           KDEKDF + C  DLKQHL+E VL KLP++Y+S  +QS +SEEDDMVPEPQLDT+VLCRSK
Sbjct: 120 KDEKDFAKACENDLKQHLDESVLLKLPKDYKSVLRQSSMSEEDDMVPEPQLDTFVLCRSK 179

Query: 756 EYITGIQLEDGPVDDRSKLFEMEPGMLYFICYKSIKALVESGKIDLL 896
           EY+TGIQLEDGPVDDRSKLFEMEPG+L+FICYKSI ALVESGKIDLL
Sbjct: 180 EYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSIXALVESGKIDLL 226


>ref|XP_003531624.1| PREDICTED: DNA replication complex GINS protein SLD5-like [Glycine
           max]
          Length = 226

 Score =  359 bits (921), Expect = 6e-97
 Identities = 184/227 (81%), Positives = 203/227 (89%)
 Frame = +3

Query: 216 MASSSVEGGPTQPIDDYDDLISTTDVELLKRAWRNEKAAPEILRFEFDLISRVREQIQLM 395
           MASSS   G +   DDY+ LI+TTDVELLKRAWRNEKAAPEILR+E  L+SRV + IQLM
Sbjct: 1   MASSSAAEGVSMD-DDYETLIATTDVELLKRAWRNEKAAPEILRYESKLVSRVNKVIQLM 59

Query: 396 EETVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHIQKTGELWNRLS 575
           EE VEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKY+FHIQKT EL NRLS
Sbjct: 60  EEIVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYVFHIQKTEELRNRLS 119

Query: 576 KDEKDFTRRCTGDLKQHLEECVLSKLPENYQSFQKQSVISEEDDMVPEPQLDTYVLCRSK 755
           K EKDF + C  DL+QHL+E VLSKLP++Y+S  +QS +SEEDDMVPEPQLDT+VLCRSK
Sbjct: 120 KYEKDFAKMCENDLEQHLDESVLSKLPKDYKSVLRQSSMSEEDDMVPEPQLDTFVLCRSK 179

Query: 756 EYITGIQLEDGPVDDRSKLFEMEPGMLYFICYKSIKALVESGKIDLL 896
           EY+TGIQLEDGPVDDRSKLFEMEPG+L+FICYKSIKALVESGKIDLL
Sbjct: 180 EYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSIKALVESGKIDLL 226


>gb|ACU21110.1| unknown [Glycine max]
          Length = 226

 Score =  357 bits (917), Expect = 2e-96
 Identities = 183/227 (80%), Positives = 202/227 (88%)
 Frame = +3

Query: 216 MASSSVEGGPTQPIDDYDDLISTTDVELLKRAWRNEKAAPEILRFEFDLISRVREQIQLM 395
           MASSS   G +   DDY+ LI+TTDVELLKRAWRNEKAAPEILR+E  L+SRV + IQLM
Sbjct: 1   MASSSAAEGVSMD-DDYETLIATTDVELLKRAWRNEKAAPEILRYESKLVSRVNKVIQLM 59

Query: 396 EETVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHIQKTGELWNRLS 575
           EE VEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKY+FHIQKT EL NRLS
Sbjct: 60  EEIVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYVFHIQKTEELRNRLS 119

Query: 576 KDEKDFTRRCTGDLKQHLEECVLSKLPENYQSFQKQSVISEEDDMVPEPQLDTYVLCRSK 755
           K EKDF + C  DL+QHL+E VLSKLP++Y+S  +QS +SEEDDMVPEPQLDT+VLCRSK
Sbjct: 120 KYEKDFAKMCENDLEQHLDESVLSKLPKDYKSVLRQSSMSEEDDMVPEPQLDTFVLCRSK 179

Query: 756 EYITGIQLEDGPVDDRSKLFEMEPGMLYFICYKSIKALVESGKIDLL 896
           EY+TGIQLEDGPVDDRSKLFEMEPG+L+FICYKSIKAL ESGKIDLL
Sbjct: 180 EYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSIKALAESGKIDLL 226


>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  281 bits (718), Expect = 2e-73
 Identities = 146/227 (64%), Positives = 176/227 (77%)
 Frame = +3

Query: 216 MASSSVEGGPTQPIDDYDDLISTTDVELLKRAWRNEKAAPEILRFEFDLISRVREQIQLM 395
           MAS S EG    P DDY+ LI+TTDVELLKRAWRNEKAAPEIL F+  L+ R REQIQLM
Sbjct: 1   MASGSEEGSGF-PADDYESLIATTDVELLKRAWRNEKAAPEILHFQTALVQRSREQIQLM 59

Query: 396 EETVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHIQKTGELWNRLS 575
           EETVEE    GTDPL+VSLYQMDLDRT FLLRSYLRIR+QKIEKYMFHI KT ++W+RLS
Sbjct: 60  EETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKT-DVWSRLS 118

Query: 576 KDEKDFTRRCTGDLKQHLEECVLSKLPENYQSFQKQSVISEEDDMVPEPQLDTYVLCRSK 755
           + E+ F +RCT D+++HLE+ VLS+LP+ YQS  KQSV SEEDDMVPEP+LDT+V C+SK
Sbjct: 119 EQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFCKSK 178

Query: 756 EYITGIQLEDGPVDDRSKLFEMEPGMLYFICYKSIKALVESGKIDLL 896
             I   QL     DD  ++ ++    LY + Y S+K L+ESG+IDL+
Sbjct: 179 GSIEAFQL-----DDSKEVVDLVADDLYILRYNSVKPLIESGQIDLV 220


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