BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018144
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi...   211   6e-53
ref|XP_003604235.1| Pentatricopeptide repeat-containing protein ...   195   3e-48
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44
emb|CBI31326.3| unnamed protein product [Vitis vinifera]              181   7e-44

>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Glycine max]
          Length = 682

 Score =  211 bits (536), Expect = 6e-53
 Identities = 104/119 (87%), Positives = 111/119 (93%)
 Frame = -3

Query: 357 KVRLAGRVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIP 178
           KVRLA RVFEEI ERDVVVWGAMLAGFAHNRL+REVLEYVRWMV+EGVKPNSV+MTIVIP
Sbjct: 266 KVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIP 325

Query: 177 VIGEVCARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERNV 1
           VIGEVCARRLG+E HAYVVKTKSYSK VP+QS+LIDMY KCGD+ SARRVFY S ERNV
Sbjct: 326 VIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNV 384



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/115 (39%), Positives = 69/115 (60%)
 Frame = -3

Query: 345 AGRVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIPVIGE 166
           A RVF    ER+VV W A+++G+A N    + L    WM  EG +P+ V +  V+PV  +
Sbjct: 372 ARRVFYGSKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQ 431

Query: 165 VCARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERNV 1
           + A   GK++HAY +K   +   V + S+L+ MYSKCG +  +RR+F +  +RNV
Sbjct: 432 LRALEQGKQIHAYALK-HWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNV 485



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/110 (30%), Positives = 61/110 (55%)
 Frame = -3

Query: 354 VRLAGRVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIPV 175
           V  + R+F+ + +R+V+ W AM+  +  N    E L  +R M     +P+SV +  ++ V
Sbjct: 470 VEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSV 529

Query: 174 IGEVCARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVF 25
            GE    +LGKE+H  ++K + ++    + + LI+MY   GD++ A  VF
Sbjct: 530 CGERKLVKLGKEIHGQILK-RDFTSVHFVSAELINMYGFFGDINKANLVF 578


>ref|XP_003604235.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355505290|gb|AES86432.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 688

 Score =  195 bits (496), Expect = 3e-48
 Identities = 96/121 (79%), Positives = 111/121 (91%), Gaps = 2/121 (1%)
 Frame = -3

Query: 357 KVRLAGRVFEEISER--DVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIV 184
           KV+LA RVFEEI ER  DVVVWG ML+GF+HNRL+REVLEYV+WMV+EG+ PNSVIMTIV
Sbjct: 267 KVKLARRVFEEIPERERDVVVWGTMLSGFSHNRLQREVLEYVKWMVEEGIYPNSVIMTIV 326

Query: 183 IPVIGEVCARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERN 4
           +PVIGEVC RRLG+EVHA+V+KTKSY+++VP+QSALIDMY KCGDLSSAR VFYSS ERN
Sbjct: 327 LPVIGEVCKRRLGQEVHAFVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERN 386

Query: 3   V 1
           V
Sbjct: 387 V 387



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/115 (36%), Positives = 66/115 (57%)
 Frame = -3

Query: 345 AGRVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIPVIGE 166
           A  VF    ER+VV W A+++G+A      + L  V WM  EG +P+ V +  V+P+  +
Sbjct: 375 ARAVFYSSPERNVVCWTALMSGYASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQ 434

Query: 165 VCARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERNV 1
           + A   GK++HAY +K   +   V + S+L+ MYSKCG +  + R+F    +RNV
Sbjct: 435 LRALEQGKQIHAYALK-HWFLPNVSLSSSLVVMYSKCGVVEYSTRLFGDMEQRNV 488



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/110 (30%), Positives = 61/110 (55%)
 Frame = -3

Query: 354 VRLAGRVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIPV 175
           V  + R+F ++ +R+V+ W AM+  +  N    E L  +R M     +P+SV M+ ++ V
Sbjct: 473 VEYSTRLFGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSV 532

Query: 174 IGEVCARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVF 25
            GE+   + GKE+H  ++K + ++    + + LI+MY   GD+  A  VF
Sbjct: 533 CGELKLLKHGKEIHGQILK-RDFTSVHFVSAELINMYGALGDVDKANLVF 581


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  181 bits (460), Expect = 4e-44
 Identities = 83/118 (70%), Positives = 106/118 (89%)
 Frame = -3

Query: 357 KVRLAGRVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIP 178
           K++LA ++F EI+ERDVVVWG+++AGFAHNRL+RE LEY R M+D+G++PNSVI+T ++P
Sbjct: 267 KIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILP 326

Query: 177 VIGEVCARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERN 4
           VIGE+ ARRLG+EVHAYV+KTKSYSKQ+ IQSALIDMY KCGD+ S R VFY+S+ERN
Sbjct: 327 VIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERN 384



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/112 (36%), Positives = 65/112 (58%)
 Frame = -3

Query: 336 VFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIPVIGEVCA 157
           VF    ER+ + W A+++G+A N    + +  V WM  EG +P+ V +  ++PV  ++ A
Sbjct: 376 VFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRA 435

Query: 156 RRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERNV 1
            R GKE+HAY +K   +   V I S+L+ MYSKCG +    ++F    +RNV
Sbjct: 436 LRPGKEIHAYAMK-NCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNV 486



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/105 (27%), Positives = 59/105 (56%)
 Frame = -3

Query: 339 RVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIPVIGEVC 160
           ++F  + +R+V++W AM+  +  N+   E ++  R M     +P++V M+ ++ +  E  
Sbjct: 476 KLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQK 535

Query: 159 ARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVF 25
             ++GKE+H  V+K K +     + + L+ +Y KCG +  A+ VF
Sbjct: 536 MLKMGKEIHGQVLKRK-FEPVHFVSAELVKLYGKCGAVKMAKMVF 579


>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 696

 Score =  181 bits (460), Expect = 4e-44
 Identities = 83/118 (70%), Positives = 106/118 (89%)
 Frame = -3

Query: 357 KVRLAGRVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIP 178
           K++LA ++F EI+ERDVVVWG+++AGFAHNRL+RE LEY R M+D+G++PNSVI+T ++P
Sbjct: 267 KIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILP 326

Query: 177 VIGEVCARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERN 4
           VIGE+ ARRLG+EVHAYV+KTKSYSKQ+ IQSALIDMY KCGD+ S R VFY+S+ERN
Sbjct: 327 VIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERN 384



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/112 (36%), Positives = 65/112 (58%)
 Frame = -3

Query: 336 VFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIPVIGEVCA 157
           VF    ER+ + W A+++G+A N    + +  V WM  EG +P+ V +  ++PV  ++ A
Sbjct: 376 VFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRA 435

Query: 156 RRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERNV 1
            R GKE+HAY +K   +   V I S+L+ MYSKCG +    ++F    +RNV
Sbjct: 436 LRPGKEIHAYAMK-NCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNV 486



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/105 (27%), Positives = 59/105 (56%)
 Frame = -3

Query: 339 RVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIPVIGEVC 160
           ++F  + +R+V++W AM+  +  N+   E ++  R M     +P++V M+ ++ +  E  
Sbjct: 476 KLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQK 535

Query: 159 ARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVF 25
             ++GKE+H  V+K K +     + + L+ +Y KCG +  A+ VF
Sbjct: 536 MLKMGKEIHGQVLKRK-FEPVHFVSAELVKLYGKCGAVKMAKMVF 579


>emb|CBI31326.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  181 bits (458), Expect = 7e-44
 Identities = 88/118 (74%), Positives = 103/118 (87%)
 Frame = -3

Query: 357 KVRLAGRVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIP 178
           K++LA  +FEEI ERDVVVWGAM+AGF HNRL+RE LEY+RWM  EG+ PNSVIMT ++P
Sbjct: 94  KIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILP 153

Query: 177 VIGEVCARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERN 4
           VIGEV A +LG+EVHAYVVKTKSYSKQV IQSALIDMY KCGD++S R+VFY+S ERN
Sbjct: 154 VIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERN 211



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/113 (38%), Positives = 67/113 (59%)
 Frame = -3

Query: 339 RVFEEISERDVVVWGAMLAGFAHNRLRREVLEYVRWMVDEGVKPNSVIMTIVIPVIGEVC 160
           +VF   +ER+ V W A+++G+  N    + L  + WM  EG +P+ V +  V+PV  E+ 
Sbjct: 202 QVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELR 261

Query: 159 ARRLGKEVHAYVVKTKSYSKQVPIQSALIDMYSKCGDLSSARRVFYSSLERNV 1
           A R GKE+H+Y VK   +   V I ++L+ MYSKCG+L  + ++F     RNV
Sbjct: 262 ALRQGKEIHSYAVK-NGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNV 313