BLASTX nr result

ID: Glycyrrhiza24_contig00018120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018120
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238615.1| uncharacterized protein LOC100500215 [Glycin...   203   2e-50
ref|XP_003617682.1| Tubulin-specific chaperone A [Medicago trunc...   199   4e-49
gb|AFK39056.1| unknown [Medicago truncatula] gi|388505112|gb|AFK...   195   6e-48
ref|NP_001237966.1| uncharacterized protein LOC100527822 [Glycin...   195   6e-48
pdb|3MXZ|A Chain A, Crystal Structure Of Tubulin Folding Cofacto...   193   2e-47

>ref|NP_001238615.1| uncharacterized protein LOC100500215 [Glycine max]
           gi|255629728|gb|ACU15213.1| unknown [Glycine max]
          Length = 114

 Score =  203 bits (517), Expect = 2e-50
 Identities = 102/110 (92%), Positives = 107/110 (97%)
 Frame = +1

Query: 76  TMRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLAESRMMI 255
           T+RSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVLAESRMMI
Sbjct: 4   TVRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMI 63

Query: 256 PDCRKRLEAALADLKGMLAELEESDEKEGPEIDDARNTIADVEKVFETTE 405
           PDCRKRLEAALADLKG+LAELEESDEK  PEID+ARNTI +VEKVFETTE
Sbjct: 64  PDCRKRLEAALADLKGLLAELEESDEKASPEIDEARNTIVEVEKVFETTE 113


>ref|XP_003617682.1| Tubulin-specific chaperone A [Medicago truncatula]
           gi|355519017|gb|AET00641.1| Tubulin-specific chaperone A
           [Medicago truncatula]
          Length = 293

 Score =  199 bits (505), Expect = 4e-49
 Identities = 101/116 (87%), Positives = 109/116 (93%), Gaps = 1/116 (0%)
 Frame = +1

Query: 64  NSMDTMRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLAES 243
           NSMDT+RSLKIKTSTCKR+VKELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ES
Sbjct: 178 NSMDTVRSLKIKTSTCKRLVKELHSYEKEVEREAAKTADMKNKGADPYDLKQQENVLGES 237

Query: 244 RMMIPDCRKRLEAALADLKGMLAE-LEESDEKEGPEIDDARNTIADVEKVFETTEA 408
           RMMIPDCRKRLEAAL DLKG+LAE L E+D+KE PEID+ARNTI +VEKVFET EA
Sbjct: 238 RMMIPDCRKRLEAALEDLKGILAELLNETDKKESPEIDEARNTIVEVEKVFETIEA 293


>gb|AFK39056.1| unknown [Medicago truncatula] gi|388505112|gb|AFK40622.1| unknown
           [Medicago truncatula]
          Length = 114

 Score =  195 bits (495), Expect = 6e-48
 Identities = 99/114 (86%), Positives = 107/114 (93%), Gaps = 1/114 (0%)
 Frame = +1

Query: 70  MDTMRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLAESRM 249
           MDT+RSLKIKTSTCKR+VKELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MDTVRSLKIKTSTCKRLVKELHSYEKEVEREAAKTADMKNKGADPYDLKQQENVLGESRM 60

Query: 250 MIPDCRKRLEAALADLKGMLAE-LEESDEKEGPEIDDARNTIADVEKVFETTEA 408
           MIPDCRKRLEAAL DLKG+LAE L E+D+KE PEID+ARNTI +VEKVFET EA
Sbjct: 61  MIPDCRKRLEAALEDLKGILAELLNETDKKESPEIDEARNTIVEVEKVFETIEA 114


>ref|NP_001237966.1| uncharacterized protein LOC100527822 [Glycine max]
           gi|255633306|gb|ACU17010.1| unknown [Glycine max]
          Length = 113

 Score =  195 bits (495), Expect = 6e-48
 Identities = 99/112 (88%), Positives = 106/112 (94%)
 Frame = +1

Query: 70  MDTMRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLAESRM 249
           M T+RSLKIKTSTCKRIVKELHSYEKEVEREAAKTADM +KGADP+DLKQQENVLAESRM
Sbjct: 1   MATVRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMTEKGADPHDLKQQENVLAESRM 60

Query: 250 MIPDCRKRLEAALADLKGMLAELEESDEKEGPEIDDARNTIADVEKVFETTE 405
           MIPDCRKRLEAALADLKG+LAELEESDEK   EID+A+NTI +VEKVFETTE
Sbjct: 61  MIPDCRKRLEAALADLKGILAELEESDEKASLEIDEAKNTIVEVEKVFETTE 112


>pdb|3MXZ|A Chain A, Crystal Structure Of Tubulin Folding Cofactor A From
           Arabidopsis Thaliana
          Length = 116

 Score =  193 bits (490), Expect = 2e-47
 Identities = 96/113 (84%), Positives = 104/113 (92%)
 Frame = +1

Query: 70  MDTMRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLAESRM 249
           M T+R+LKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVL ESRM
Sbjct: 4   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 63

Query: 250 MIPDCRKRLEAALADLKGMLAELEESDEKEGPEIDDARNTIADVEKVFETTEA 408
           MIPDC KRLE+ALADLK  LAELEE+DEKEGPEI+DA+ T+ADVEK F T +A
Sbjct: 64  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTEDA 116


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