BLASTX nr result
ID: Glycyrrhiza24_contig00018117
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00018117 (452 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802... 53 8e-13 ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glyc... 45 1e-09 ref|XP_003602518.1| Splicing factor-like protein [Medicago trunc... 45 4e-09 ref|XP_003602517.1| Splicing factor-like protein [Medicago trunc... 45 4e-09 ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti... 43 3e-07 >ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max] Length = 549 Score = 52.8 bits (125), Expect(2) = 8e-13 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = +1 Query: 307 SERSYRKREEIDEVAEEKRSKRSRGDDEHGS 399 SERSYRKREEIDE EE +SKRSRGD+E+GS Sbjct: 28 SERSYRKREEIDEGIEETKSKRSRGDEENGS 58 Score = 45.4 bits (106), Expect(2) = 8e-13 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +3 Query: 126 MEFDEYDYLEKAVEEHEDRDSTKKK 200 M+FDEYDYLEK VEE ED DS++KK Sbjct: 1 MDFDEYDYLEKTVEEQEDHDSSRKK 25 >ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max] Length = 554 Score = 45.1 bits (105), Expect(2) = 1e-09 Identities = 21/37 (56%), Positives = 30/37 (81%), Gaps = 2/37 (5%) Frame = +1 Query: 292 DSGDRSERSYRKREEIDEV--AEEKRSKRSRGDDEHG 396 D D+SERSYRK ++D+ A++++SKRSRGDDE+G Sbjct: 27 DITDKSERSYRKPRDVDDDLDADDRKSKRSRGDDENG 63 Score = 42.4 bits (98), Expect(2) = 1e-09 Identities = 18/25 (72%), Positives = 22/25 (88%) Frame = +3 Query: 126 MEFDEYDYLEKAVEEHEDRDSTKKK 200 M+FDEY+YLEK VEE D+DS+KKK Sbjct: 1 MDFDEYEYLEKTVEEDIDKDSSKKK 25 >ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula] gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula] Length = 766 Score = 45.1 bits (105), Expect(2) = 4e-09 Identities = 23/39 (58%), Positives = 29/39 (74%), Gaps = 3/39 (7%) Frame = +1 Query: 292 DSGDRSERSYRKREEIDEVAEEKRSKR---SRGDDEHGS 399 +S D++ERSYRKR+EI++ EEKRSKR GDDE S Sbjct: 25 ESSDKTERSYRKRDEIEDGTEEKRSKRRSSGDGDDERVS 63 Score = 40.4 bits (93), Expect(2) = 4e-09 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = +3 Query: 126 MEFDEYDYLEKAVEEHEDRDSTKKK 200 M+FDEY+YLEK VEE ED+DS K + Sbjct: 1 MDFDEYEYLEKTVEELEDKDSKKNE 25 >ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula] gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula] Length = 731 Score = 45.1 bits (105), Expect(2) = 4e-09 Identities = 23/39 (58%), Positives = 29/39 (74%), Gaps = 3/39 (7%) Frame = +1 Query: 292 DSGDRSERSYRKREEIDEVAEEKRSKR---SRGDDEHGS 399 +S D++ERSYRKR+EI++ EEKRSKR GDDE S Sbjct: 25 ESSDKTERSYRKRDEIEDGTEEKRSKRRSSGDGDDERVS 63 Score = 40.4 bits (93), Expect(2) = 4e-09 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = +3 Query: 126 MEFDEYDYLEKAVEEHEDRDSTKKK 200 M+FDEY+YLEK VEE ED+DS K + Sbjct: 1 MDFDEYEYLEKTVEELEDKDSKKNE 25 >ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera] Length = 542 Score = 43.1 bits (100), Expect(2) = 3e-07 Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 5/38 (13%) Frame = +1 Query: 292 DSGDRSERSYRKRE-----EIDEVAEEKRSKRSRGDDE 390 D G++SERSYRKRE + DE E +RSKRSRG++E Sbjct: 23 DGGEKSERSYRKREGGEEDDDDERGEGRRSKRSRGEEE 60 Score = 36.2 bits (82), Expect(2) = 3e-07 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = +3 Query: 126 MEFDEYDYLEKAVEEHEDRDSTKKK 200 M+FDEY+YLEKAVEE E+R KKK Sbjct: 1 MDFDEYEYLEKAVEEPENR---KKK 22